source.jalview.org Git - jalview.git/history

git://source.jalview.org / jalview.git / history

[jalview.git] / src / jalview / commands /

2014-05-22	Jim Procter	JAL-1503 update version in GPL header	tree \| commitdiff
2014-01-29	Jim Procter	JAL-1432 updated copyright notices	tree \| commitdiff
2012-10-22	jprocter	Jalview 2.8 Source Header	tree \| commitdiff
2012-10-03	jprocter	formatting	tree \| commitdiff
2012-08-05	jprocter	JAL-1131 - todos for later versions	tree \| commitdiff
2012-08-05	jprocter	JAL-1131 ensure new dataset sequence is created if...	tree \| commitdiff
2012-06-13	jprocter	javatidy	tree \| commitdiff
2012-06-12	jprocter	JAL-1115 refactor base collection for Alignment from...	tree \| commitdiff
2011-10-10	jprocter	update author list in license for (JAL-826)	tree \| commitdiff
2011-10-04	jprocter	Merge remote-tracking branch 'remotes/origin/2_5_1_rna_...	tree \| commitdiff
2011-09-27	jprocter	apply version 2.7 copyright	tree \| commitdiff
2011-07-25	janengelhardt	JAL-842; toy example to insert nucleotides in sequences...	tree \| commitdiff
2010-09-23	jprocter	apply jalview code style	tree \| commitdiff
2010-09-23	jprocter	Jalview 2.6 source licence	tree \| commitdiff
2010-04-30	jprocter	jalview 2.5 release banner	tree \| commitdiff
2009-06-08	jprocter	apply gpl development license	tree \| commitdiff
2008-09-04	jprocter	merge from 2_4_Release branch	tree \| commitdiff
2008-08-26	jprocter	bugfix todo for the 'edit sequence' command	tree \| commitdiff
2007-06-17	jprocter	recovery of identical dataset sequence object on undo...	tree \| commitdiff
2007-05-04	amwaterhouse	Annotations do not extend when full alignment is adjusted	tree \| commitdiff
2007-05-02	jprocter	refactored do and undo() method to take array of alignm...	tree \| commitdiff
2007-04-27	jprocter	bugfix for deleted annotation undo	tree \| commitdiff
2007-04-25	jprocter	AlignmentAnnotation: added annotation score attribute...	tree \| commitdiff
2007-04-19	jprocter	ensure edit command gapChar is updated and used for...	tree \| commitdiff
2007-04-19	amwaterhouse	REPLACE added to edit command	tree \| commitdiff
2007-04-18	amwaterhouse	Pad gaps when annotation editing	tree \| commitdiff
2007-04-17	jprocter	paste/cut now adds or removes associated AlignmentAnnot...	tree \| commitdiff
2007-02-27	amwaterhouse	jmol added	tree \| commitdiff
2007-02-07	amwaterhouse	Formatting	tree \| commitdiff
2007-02-05	amwaterhouse	Alignment editing columns 0 and 1 fixed	tree \| commitdiff
2007-02-05	amwaterhouse	Fixed bug in trim right annotation adjust	tree \| commitdiff
2007-02-05	amwaterhouse	Fixed bug in trim right annotation adjust	tree \| commitdiff
2007-02-02	amwaterhouse	getWidth -1 for trim right	tree \| commitdiff
2007-02-02	amwaterhouse	check annotation size when cutting	tree \| commitdiff
2007-01-31	amwaterhouse	Adjust features when cutting and pasting	tree \| commitdiff
2007-01-26	amwaterhouse	Adjusts annotations for sequence edits	tree \| commitdiff
2007-01-25	amwaterhouse	Annotation adjustment moved to EditCommand	tree \| commitdiff
2007-01-24	amwaterhouse	This constructor is never called	tree \| commitdiff
2006-12-05	amwaterhouse	Sequence is char []	tree \| commitdiff
2006-11-30	amwaterhouse	char array replaces string for cuts	tree \| commitdiff
2006-11-21	amwaterhouse	Undo cut from end of alignment, padding on	tree \| commitdiff
2006-11-15	amwaterhouse	Must be able to find originating alignment modified	tree \| commitdiff
2006-10-26	amwaterhouse	Returns number of columns deleted	tree \| commitdiff
2006-10-26	amwaterhouse	Remove system.out	tree \| commitdiff
2006-10-26	amwaterhouse	check command.string[i] is not null	tree \| commitdiff
2006-10-26	amwaterhouse	Sequence length maybe less than end	tree \| commitdiff
2006-10-26	amwaterhouse	Known bugs fixed	tree \| commitdiff
2006-10-25	amwaterhouse	Adjusts columnSelection correctly	tree \| commitdiff
2006-10-24	amwaterhouse	Commands which can be done, or undone	tree \| commitdiff

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