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Varna external frame bug solved
[jalview.git] / src / jalview / datamodel /
2011-07-25 janengelhardtFurther structure accessing feature tree | commitdiff
2011-07-25 janengelhardtContainer for VARNA classes are created according to... tree | commitdiff
2011-07-25 janengelhardt'Update to Covariaton color scheme' merge; JAL-580 tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-07-08 jprocteropen each query result from an alignment datasource... tree | commitdiff
2011-07-06 jprocterensure selseq is trimmed to just sequences included... tree | commitdiff
2011-05-05 jprocteruncommentable debug message for JAL-771 tree | commitdiff
2011-04-21 jprocterallow an alignment annotation row to be removed and... tree | commitdiff
2011-04-21 jprocterallow an existing alignment annotation row to be bound... tree | commitdiff
2011-02-27 jprocterfirst patch for JAL-774 - ensure end is a valid bound... tree | commitdiff
2011-01-05 jprocterpropagated groups trimmed to correct region on viscontig tree | commitdiff
2011-01-05 jproctergraphThreshold not being copied by constructor tree | commitdiff
2010-12-17 jprocteradjust start and end of intersecting group relative... tree | commitdiff
2010-12-17 jprocter1.1 compat tree | commitdiff
2010-12-17 jprocter1.1 compat tree | commitdiff
2010-12-17 jprocterrefactored gap insert/visible view modification code... tree | commitdiff
2010-12-17 jprocterjavadoc tree | commitdiff
2010-12-10 jprocterremove implicit non-1.1 compatible call tree | commitdiff
2010-12-09 jprocterjava 1.1 patches tree | commitdiff
2010-12-09 jprocterjava 1.1 patches tree | commitdiff
2010-12-09 jprocternew methods and test code for JAL-716 tree | commitdiff
2010-12-09 jprocternew constructor and refactored methods for intersecting... tree | commitdiff
2010-12-09 jprocternew methods for testing for/storing selection/group... tree | commitdiff
2010-12-09 jprocterjavadoc and additional convenience method for JAL-716 tree | commitdiff
2010-12-02 jprocterrefactored visible contig/gap map array intersection... tree | commitdiff
2010-11-14 jprocterzero length operations are valid tree | commitdiff
2010-11-12 jprocterpatch for JAL-700 tree | commitdiff
2010-09-23 jprocterapply jalview code style tree | commitdiff
2010-09-23 jprocterJalview 2.6 source licence tree | commitdiff
2010-06-11 jprocterpatched for JAL-531 - only display full symbol distribu... tree | commitdiff
2010-06-08 jprocterPatch for incorrect column selection when hidden region... tree | commitdiff
2010-06-06 jprocterpatch for JAL-542 tree | commitdiff
2010-06-03 jprocterjavadoc re JAL-554 tree | commitdiff
2010-04-30 jprocterjalview 2.5 release banner tree | commitdiff
2010-04-29 jproctermake sure references are intact when group annotation... tree | commitdiff
2010-04-29 jprocterisAligned assertion (bug 0008144) tree | commitdiff
2010-04-28 jproctergroup/annotation association housekeeping tree | commitdiff
2010-04-23 jprocterjavadoc tree | commitdiff
2010-04-16 jprocterpatch for bug #36198 - more to follow on Monday. tree | commitdiff
2010-04-14 jprocterprofile visualizations are now logos tree | commitdiff
2010-03-30 jproctername update for group autoannotation and consensus... tree | commitdiff
2010-03-26 jproctercomments tree | commitdiff
2010-03-22 jproctertodo and sensible default setting of min/max for histog... tree | commitdiff
2010-03-11 jprocterindividual label format settings for each annotation... tree | commitdiff
2009-11-09 jprocterno Vector(Vector) copy constructor in 1.2 tree | commitdiff
2009-11-06 jproctersetting and merging selected columns from another selec... tree | commitdiff
2009-08-21 jprocterbasic implementation of profile display and todos tree | commitdiff
2009-08-21 jproctertodo tree | commitdiff
2009-07-24 jprocterimplement new insert annotation row method and ensure... tree | commitdiff
2009-07-24 jprocterinsert annotation at specific position tree | commitdiff
2009-07-24 jprocteroptional sequencegroup ref for annotation row tree | commitdiff
2009-07-24 jproctersequence groups carry their own conservation and consen... tree | commitdiff
2009-06-24 jprocterfix to cope with EMBL records containing a CDS fragment... tree | commitdiff
2009-06-19 jprocterparent db references and mappings added to retrieved... tree | commitdiff
2009-06-19 jprocterintersect did not intersect (used in selection listener) tree | commitdiff
2009-06-08 jprocterapply gpl development license tree | commitdiff
2009-06-01 jprocterapply method for a NodeTransform to nodes in a tree tree | commitdiff
2009-06-01 jprocterjavadoc tree | commitdiff
2009-04-14 jprocterpatch to fix occasional arrayoutofbounds exception... tree | commitdiff
2009-02-24 jprocterbugfix for occasional nullpointer exceptions when selec... tree | commitdiff
2009-02-06 jproctershowUnconserved group attribute tree | commitdiff
2008-12-19 jprocteravoid null pointer exception when groupName is not set tree | commitdiff
2008-12-19 jprocterleft and right justify method tree | commitdiff
2008-12-05 jproctersupport for multiple accession retrieval from a databas... tree | commitdiff
2008-11-12 jprocterjdk1.2 compatibility tree | commitdiff
2008-11-12 jprocternew copy constructor and intersect method tree | commitdiff
2008-11-12 jprocterinvolvesSequence to check if searchResults intersect... tree | commitdiff
2008-11-12 jprocterjavadoc and new method to get alignment sequence index... tree | commitdiff
2008-11-04 jprocterbeginning of implementation of new properties for hide... tree | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch tree | commitdiff
2008-08-20 jproctertooltip displays formatted annotation row description... tree | commitdiff
2008-08-15 jproctersafer copy constructor tree | commitdiff
2008-08-06 jproctergetDBRefs now always returns DBRefArray if it exists... tree | commitdiff
2008-07-18 jprocterallow findSeq to begin *after* a given sequence in... tree | commitdiff
2008-07-18 jprocterSequence label colour stored for each sequence group tree | commitdiff
2008-06-23 jprocterlocal sequence properties are preserved in SeqCigar... tree | commitdiff
2008-05-01 jprocterfix for unicode char labels causing arrayOutOfBoundsExc... tree | commitdiff
2008-02-22 jprocterCDS segment index tree | commitdiff
2008-02-22 jprocterpossible fix for stockhom ss-annotation re-creation... tree | commitdiff
2008-02-22 jprocterindex number for contiguous part of mapped sequence... tree | commitdiff
2008-02-22 jprocterjavadoc tree | commitdiff
2008-01-22 jprocternew method to get map of sequence positions correspondi... tree | commitdiff
2007-12-21 jproctersequence db fetcher metadata for multiple sequence... tree | commitdiff
2007-12-21 jproctertemporary bugfix ? tree | commitdiff
2007-12-21 jprocterbugfix tree | commitdiff
2007-12-21 jprocterequivalence for transferring/updating references tree | commitdiff
2007-11-30 jprocternull pointer bugfix tree | commitdiff
2007-11-30 jprocterjavadoc and transferAnnotation method tree | commitdiff
2007-11-30 jproctercase insensitive matching of database ids tree | commitdiff
2007-11-30 jproctercase invariant matching of seqeunce feature to sequence... tree | commitdiff
2007-11-16 jprocterjavadoc tree | commitdiff
2007-11-08 jprocterend must be greater than blockstart tree | commitdiff
2007-10-31 jprocterjavadoc tree | commitdiff
2007-10-31 jprocterfix parsing of embl entries like S75919 which have... tree | commitdiff
2007-10-24 jprocterensure PDB ids are updated on the dataset sequence tree | commitdiff
2007-10-04 jprocterrefactored invertColumnSelection as an object method tree | commitdiff
2007-10-02 jprocterconvenience constructor for duplicating an annotation... tree | commitdiff
2007-10-02 jprocterjavadoc and operator for editing AlignmentAnnotation... tree | commitdiff
2007-10-02 jprocterjavadoc tree | commitdiff
2007-09-29 jprocterupdatePDBEntry method to add any PDBEntry from the... tree | commitdiff
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