2022-12-14 |
Jim Procter | Merge branch 'develop' into update_212_Dec_merge_with_2... |
tree | commitdiff |
2022-11-21 |
Jim Procter | Merge commit 'alpha/update_2_12_for_2_11_2_series_merge... |
tree | commitdiff |
2022-03-08 |
Jim Procter | JAL-3438 spotless for 2.11.2.0 |
tree | commitdiff |
2022-02-15 |
Jim Procter | JAL-1761 backbone type parameter for configuring which... |
tree | commitdiff |
2022-02-15 |
Jim Procter | JAL-1761 need to pass molecule type when generating... |
tree | commitdiff |
2022-02-11 |
Jim Procter | JAL-3949 - refactor logging from jalview.bin.Cache... |
tree | commitdiff |
2022-02-11 |
Ben Soares | JAL-3949 Complete new abstracted logging framework... |
tree | commitdiff |
2021-09-21 |
Ben Soares | JAL-3691 automatic insertion of Locale.ROOT to toUpperC... |
tree | commitdiff |
2021-09-20 |
Jim Procter | JAL-3829 make sure structure data type reflects actual... |
tree | commitdiff |
2021-09-15 |
Ben Soares | JAL-3818 formatting |
tree | commitdiff |
2021-09-15 |
gmungoc | JAL-3818 process Jmol callbacks in AWT thread |
tree | commitdiff |
2021-09-14 |
Jim Procter | JAL-3855 detect an alphafold model and import its tempe... |
tree | commitdiff |
2021-09-02 |
gmungoc | JAL-1842 remove redundant call to FeatureRenderer.featu... |
tree | commitdiff |
2021-09-02 |
gmungoc | JAL-3509 better placement of call to notifyFeaturesChan... |
tree | commitdiff |
2021-09-02 |
gmungoc | JAL-3509 coerce RESNUM to hidden (really) after fetchin... |
tree | commitdiff |
2021-02-11 |
gmungoc | JAL-3818 process Jmol callbacks in AWT thread bug/JAL-3818_jmolDeadlock |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 pull up closeViewer() and external viewer... |
tree | commitdiff |
2020-06-05 |
BobHanson | Refactoring of Jalview, JalviewAppLoader, JalviewApp... |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-3551 null pointer defence while structure files... feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-26 |
gmungoc | JAL-1761 pattern for structure viewer construction... |
tree | commitdiff |
2020-05-21 |
gmungoc | JAL-3551 copy Jalview features to Pymol 'p' (with pull... |
tree | commitdiff |
2020-05-20 |
gmungoc | JAL-3626 use Viewer.scriptWait() to send Jmol commands... |
tree | commitdiff |
2020-05-19 |
gmungoc | Merge branch 'develop' into feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-3551 pull up Close Viewer dialog to base class |
tree | commitdiff |
2020-05-12 |
gmungoc | JAL-3518 tidy method, remove obsolete comment |
tree | commitdiff |
2020-05-12 |
gmungoc | JAL-3518 failsafe check for null Jmol filename while... |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-3551 concatenate colour by sequence commands for... |
tree | commitdiff |
2020-04-30 |
gmungoc | JAL-3551 save structure viewer session refactorings... |
tree | commitdiff |
2020-03-16 |
gmungoc | JAL-3551 tidying, improved commands, fix Jmol model... |
tree | commitdiff |
2020-03-13 |
gmungoc | JAL-3551 working proof of concept of Jalview driving... |
tree | commitdiff |
2020-03-03 |
gmungoc | JAL-3158 superseded superposeStructures methods removed |
tree | commitdiff |
2020-03-03 |
gmungoc | JAL-3518 more pull up / test coverage of structure... |
tree | commitdiff |
2020-02-28 |
gmungoc | JAL-3518 basic refactoring / pull up of superposeStruct... |
tree | commitdiff |
2020-02-21 |
gmungoc | JAL-2422 tidy of methods and parameters |
tree | commitdiff |
2020-02-21 |
gmungoc | JAL-2422 general pull-up/removal of common or unused... |
tree | commitdiff |
2020-02-20 |
gmungoc | JAL-2422 pull-up refactoring of structure commands... |
tree | commitdiff |
2020-02-06 |
gmungoc | JAL-1842 remove redundant call to FeatureRenderer.featu... |
tree | commitdiff |
2020-02-06 |
gmungoc | JAL-3509 better placement of call to notifyFeaturesChan... |
tree | commitdiff |
2020-02-06 |
gmungoc | JAL-3509 coerce RESNUM to hidden (really) after fetchin... |
tree | commitdiff |
2020-02-04 |
gmungoc | JAL-2422 pull up refactoring in preparation for Chimera... |
tree | commitdiff |
2019-10-08 |
gmungoc | Merge branch 'develop' into Jalview-JS/develop |
tree | commitdiff |
2019-07-16 |
gmungoc | JAL-3210 Merge branch 'develop' into trialMerge |
tree | commitdiff |
2019-07-05 |
gmungoc | JAL-3187 initial refactoring towards peptide variant... |
tree | commitdiff |
2019-06-06 |
gmungoc | Merge branch 'develop' into trialMerge |
tree | commitdiff |
2019-05-06 |
gmungoc | JAL-3244 delete obsolete method |
tree | commitdiff |
2019-04-16 |
hansonr | localizes Thread colourby so that it does not cause... |
tree | commitdiff |
2019-03-20 |
Ben Soares | JAL-3130 Lots of deprecation fixes. See utils/deprecat... |
tree | commitdiff |
2019-02-19 |
gmungoc | JAL-3187 hacks to get peptide variant in to Jmol hover... |
tree | commitdiff |
2018-12-25 |
hansonr | better Jmol help link |
tree | commitdiff |
2018-12-06 |
gmungoc | Merge branch 'develop' into Jalview-BH/JAL-3026-JAL... |
tree | commitdiff |
2018-12-06 |
gmungoc | JAL-1854 fix Checkstyle import violations |
tree | commitdiff |
2018-11-14 |
gmungoc | JAL-3032 don't throw Exception to signal chain not... |
tree | commitdiff |
2018-11-14 |
gmungoc | JAL-3152 holding patch for colour Jmol by sequence |
tree | commitdiff |
2018-08-27 |
hansonr | JAL-3026 Jmol functioning; some issues |
tree | commitdiff |
2018-08-24 |
hansonr | JAL-3026 GD#107,128,130,139 build-site.xml |
tree | commitdiff |
2018-08-21 |
hansonr | mc_view references were MCview |
tree | commitdiff |
2018-07-22 |
hansonr | allows for null Jmol viewer |
tree | commitdiff |
2018-06-28 |
hansonr | JAL-3032 DND enabled; additional io changes for File... |
tree | commitdiff |
2018-05-07 |
Jim Procter | JAL-2321 use StructureImportSettings singleton settings... |
tree | commitdiff |
2018-05-07 |
Jim Procter | JAL-2321 allow JmolParser to be configured before parsi... |
tree | commitdiff |
2018-05-04 |
Jim Procter | Merge branch 'bug/JAL-2899' into releases/Release_2_10_... |
tree | commitdiff |
2018-05-01 |
Jim Procter | JAL-2899 colouring moved from SwingWorker to a backgrou... |
tree | commitdiff |
2018-04-30 |
Jim Procter | Merge branch 'bug/JAL-2899' into releases/Release_2_10_... |
tree | commitdiff |
2018-04-05 |
Jim Procter | JAL-2945 resolve model as PDB file. Need to verify... |
tree | commitdiff |
2018-02-12 |
Jim Procter | JAL-2780 JAL-2781 ahem - add a semicolon if there isn... |
tree | commitdiff |
2018-02-07 |
Jim Procter | JAL-2780 JAL-2781 don’t assume contiguous mapping to... |
tree | commitdiff |
2018-02-02 |
gmungoc | JAL-2899 asynchronous Jmol colour updates bug/JAL-2899 |
tree | commitdiff |
2017-10-27 |
gmungoc | JAL-1793 spike branch updated to latest |
tree | commitdiff |
2017-10-25 |
Jim Procter | Merge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... |
tree | commitdiff |
2017-10-24 |
gmungoc | JAL-2738 update spike branch with latest |
tree | commitdiff |
2017-10-23 |
gmungoc | JAL-1854 keep fallthrough but with comment to suppress... |
tree | commitdiff |
2017-10-23 |
gmungoc | JAL-1854 remove fallthrough of switch case (Checkstyle... |
tree | commitdiff |
2017-10-10 |
Jim Procter | Merge branch 'codereviews/JAL-1990_IProgressIndicator_j... |
tree | commitdiff |
2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
tree | commitdiff |
2017-08-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList |
tree | commitdiff |
2017-08-16 |
Jim Procter | JAL-2418 source formatting |
tree | commitdiff |
2017-06-14 |
gmungoc | JAL-2598 Sequence.getSequence return a copy of the... |
tree | commitdiff |
2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'features/JAL-2465_No-mapping_Jmol-structu... |
tree | commitdiff |
2017-05-01 |
tcofoegbu | JAL-2465 bugfix and rerefactor renamed getPdbFile(... |
tree | commitdiff |
2017-04-24 |
kiramt | JAL-2388 Hidden cols separated from column selection... |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2430 code tidy, unit test for Jmol hidden column... |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2438 check for null FeatureRenderer |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour |
tree | commitdiff |
2017-03-13 |
gmungoc | JAL-2438 FeatureColourFinder refactored from FeatureRen... |
tree | commitdiff |
2017-03-08 |
gmungoc | JAL-2430 colour columns hidden in alignment gray on... |
tree | commitdiff |
2017-03-07 |
gmungoc | JAL-2295 status messages for Chimera attributes set... |
tree | commitdiff |
2017-01-09 |
gmungoc | JAL-2371 remove ColourSchemeI.findColour(c), pure inter... |
tree | commitdiff |
2016-12-22 |
gmungoc | JAL-2360 structure viewers now using ColourMenuHelper... |
tree | commitdiff |
2016-12-12 |
gmungoc | JAL-2632 corrected lookup of residue colour |
tree | commitdiff |
2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
tree | commitdiff |
2016-11-22 |
Jim Procter | Merge branch 'features/JAL-2177_update_jmol_to_14.6... |
tree | commitdiff |
2016-11-10 |
tcofoegbu | JAL-2317 Fixed Chimera command for hiding/showing disti... bug/JAL-2317_jmol_chimera-chain-factorisation |
tree | commitdiff |
2016-11-10 |
tcofoegbu | Bugfix to enable accurate chain extraction/association... |
tree | commitdiff |
2016-10-27 |
tcofoegbu | JAL-2177 Jmol update from: Jmol-14.2.14_2015.06.11... |
tree | commitdiff |
2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
tree | commitdiff |
2016-10-24 |
Jim Procter | Merge branch 'releases/Release_2_10_0_Branch' |
tree | commitdiff |
2016-10-17 |
tcofoegbu | JAL-2262 JAL-2195 Improvement to set PDBId availability... |
tree | commitdiff |
2016-10-13 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop |
tree | commitdiff |
2016-10-13 |
gmungoc | JAL-2044 ensure AAStructureBindingModel.pdbEntry has... |
tree | commitdiff |
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