git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Added proper title to aptx trees
[jalview.git] / src / jalview / ext /
2017-10-26 kjvdheideAdded proper title to aptx trees tree | commitdiff
2017-10-26 kjvdheideAdded TreeBuilder as parameter to the converter constructor tree | commitdiff
2017-10-26 kjvdheideName changed of aptx treebuilder to treeconverter tree | commitdiff
2017-10-26 kjvdheidenamed most Jalview threads tree | commitdiff
2017-10-25 kjvdheidefinished up tests for trees made from jalview data tree | commitdiff
2017-10-25 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... tree | commitdiff
2017-10-24 kjvdheideTests for Aptx tree created from a Phylogeny object... tree | commitdiff
2017-10-24 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop tree | commitdiff
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress... tree | commitdiff
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle... tree | commitdiff
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253 tree | commitdiff
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain tree | commitdiff
2017-10-13 kjvdheidebasic tests for Aptx tree | commitdiff
2017-10-13 kjvdheideArchaeopteryxInit is now static tree | commitdiff
2017-10-13 kjvdheidesimplified aptx frame creation code tree | commitdiff
2017-10-13 kjvdheideSlight Aptx colour change tree | commitdiff
2017-10-12 kjvdheideCustom aptx configuration added tree | commitdiff
2017-10-12 kjvdheidemoved Aptx creation from CalculationChooser to separate... tree | commitdiff
2017-10-12 kjvdheideCreated test class for Archaeopteryx tree viewing tree | commitdiff
2017-10-11 kjvdheideforester as submodule with InternalFrame + start of... tree | commitdiff
2017-10-11 kjvdheidejust a comment tree | commitdiff
2017-10-11 kjvdheideAdded tree building (without distances yet) tree | commitdiff
2017-10-10 Jim ProcterMerge branch 'codereviews/JAL-1990_IProgressIndicator_j... tree | commitdiff
2017-10-10 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-10 kjvdheideStart of programmatically creating Aptx trees tree | commitdiff
2017-10-09 kjvdheideStart of creating tree nodes for Aptx tree | commitdiff
2017-10-09 kjvdheideFully separated tree GUI from calculation tree | commitdiff
2017-10-09 gmungocJAL-2523 basic sleep and retry (3 times) on 429 respons... features/JAL-2523httpRetries tree | commitdiff
2017-10-09 gmungocJAL-2523 convenience method to get model organisms tree | commitdiff
2017-10-07 kjvdheideRenaming tree | commitdiff
2017-10-06 kjvdheideStart of creating the objects Archaeopteryx needs tree | commitdiff
2017-10-05 kjvdheideBlank interfaces added tree | commitdiff
2017-10-04 gmungocJAL-2523 start of refactoring... tree | commitdiff
2017-10-03 kjvdheideProper copyright dating added tree | commitdiff
2017-10-03 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-03 kjvdheideKept copyright test to just the new classes tree | commitdiff
2017-10-03 kjvdheideCopyright test tree | commitdiff
2017-10-02 gmungocJAL-2525 lookup transcript features by Ontology tree | commitdiff
2017-09-29 kjvdheideBegin separation of GUI and tree calculation logic origin/spikes/koen tree | commitdiff
2017-08-31 gmungocJAL-2105 REST versions updated to 6.1 (Ensembl) 6.0... tree | commitdiff
2017-08-31 gmungocJAL-2253 safer simpler resolution of identifiers using... tree | commitdiff
2017-08-25 gmungocJAL-2480 suppress debug timing output that got left in tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-06-14 gmungocJAL-2598 Sequence.getSequence return a copy of the... tree | commitdiff
2017-06-05 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-04 Jim ProcterJAL-2582 comment about IDs being lost if they resembl... tree | commitdiff
2017-06-04 Jim ProcterJAL-2582 recognise ENS…P peptide IDs and make two getPa... tree | commitdiff
2017-05-30 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-29 Jim ProcterMerge branch 'features/JAL-2465_No-mapping_Jmol-structu... tree | commitdiff
2017-05-25 gmungocJAL-2050 make SequenceFeature.score final, adjust const... tree | commitdiff
2017-05-24 gmungocJAL-2529 add object_type=cdna to EnsemblCdna parameters tree | commitdiff
2017-05-18 gmungocJAL-2490 retrieve visible features only tree | commitdiff
2017-05-16 gmungocJAL-2525 put in missing "transcript" feature type tree | commitdiff
2017-05-15 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-12 gmungocJAL-2525 get sequence features for Ontology term(s... tree | commitdiff
2017-05-12 gmungocJAL-2480 renamed java.util.RangeComparator to IntRangeC... tree | commitdiff
2017-05-09 gmungocJAL-2505 use constructors to set (what will be) final... tree | commitdiff
2017-05-08 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-05-03 gmungocJAL-2105 Ensembl REST now at 5.0 tree | commitdiff
2017-05-01 tcofoegbuJAL-2465 bugfix and rerefactor renamed getPdbFile(... tree | commitdiff
2017-04-26 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-26 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-24 gmungocJAL-2487 remove redundant refreshGUI to minimise thread... tree | commitdiff
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... tree | commitdiff
2017-03-31 gmungocJAL-2430 code tidy, unit test for Jmol hidden column... tree | commitdiff
2017-03-21 gmungocJAL-2438 check for null FeatureRenderer tree | commitdiff
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour tree | commitdiff
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen... tree | commitdiff
2017-03-08 gmungocJAL-2430 colour columns hidden in alignment gray on... tree | commitdiff
2017-03-08 gmungocJAL-2295 avoid quotes breaking attribute value parsing tree | commitdiff
2017-03-07 gmungocJAL-2295 status messages for Chimera attributes set... tree | commitdiff
2017-03-01 gmungocMerge branch 'features/JAL-2295setChimeraAttributes... tree | commitdiff
2017-02-09 gmungocMerge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory tree | commitdiff
2017-01-23 gmungocJAL-2379 made SparseMatrix.divide() so as to exactly... tree | commitdiff
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2017-01-17 gmungocJAL-2379 SparseDoubleArray added (for use by SparseMatrix) tree | commitdiff
2017-01-09 gmungocJAL-2371 remove ColourSchemeI.findColour(c), pure inter... tree | commitdiff
2016-12-22 gmungocJAL-2360 structure viewers now using ColourMenuHelper... tree | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, tree | commitdiff
2016-12-12 gmungocJAL-2632 corrected lookup of residue colour tree | commitdiff
2016-12-09 gmungocJAL-2105 updated for reviewed REST version 4.8 tree | commitdiff
2016-12-08 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-12-07 gmungocJAL-2354 handle error response when fetching features tree | commitdiff
2016-12-02 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-30 Jim ProcterMerge branch 'features/JAL-2320_closeChimeraAction... tree | commitdiff
2016-11-29 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-23 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-22 Jim ProcterMerge branch 'features/JAL-2177_update_jmol_to_14.6... tree | commitdiff
2016-11-17 gmungocJAL-98 javadoc, third party acknowledgements (and very... tree | commitdiff
2016-11-16 gmungocJAL-2296 unit test for reading Chimera attributes to... tree | commitdiff
2016-11-16 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-16 gmungocJAL-2296 don't copy attribute with value False tree | commitdiff
2016-11-16 gmungocJAL-2295 don't exclude RESNUM from transfer to Chimera tree | commitdiff
2016-11-14 gmungocJAL-2296 new code and refactoring for 'copy Chimera... tree | commitdiff
next