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JAL-2799 all tabs now get mouse listeners and Jalview switches tree view
[jalview.git] / src / jalview / ext /
2017-11-24 kjvdheideJAL-2799 all tabs now get mouse listeners and Jalview... kjvdh/features/PhylogenyViewer_tabbedsupport tree | commitdiff
2017-11-24 kjvdheideMerge branch 'kjvdh/features/PhylogenyViewer' of https... tree | commitdiff
2017-11-24 kjvdheideJAL-2838 start on sorting tree | commitdiff
2017-11-22 kjvdheideJAL-2794 reworked, everything routes via avport.sendsel... tree | commitdiff
2017-11-22 kjvdheideJAL-2794 removed several redundancies in the binding... tree | commitdiff
2017-11-22 kjvdheideJAL-2844 mouse press code rearranged to prepare for... tree | commitdiff
2017-11-22 kjvdheideJAL-2847 small things, filled in actionperformeds tree | commitdiff
2017-11-22 kjvdheideJAL-2799 fixed selections not carrying over to tabs... tree | commitdiff
2017-11-21 kjvdheideJAL-281 added string label for loading from database tree | commitdiff
2017-11-20 kjvdheideMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2017-11-20 kjvdheideJAL-2799 JAL-2805 JAL-281 multiple trees can now be... tree | commitdiff
2017-11-20 kjvdheideJAL-281 option pane with error handling for selecting... tree | commitdiff
2017-11-17 kjvdheideJAL-2805 code refactor (actionPerformed cleaned up... tree | commitdiff
2017-11-17 kjvdheideJAL-2805 reorganized code, tree building goes through... tree | commitdiff
2017-11-17 kjvdheideJAL-2795 removed unneeded distancematrix length/width... tree | commitdiff
2017-11-17 kjvdheideMerge branch 'kjvdh/features/PhylogenyViewer' of tree | commitdiff
2017-11-17 kjvdheideJAL-2805 couple of method name changes tree | commitdiff
2017-11-16 kjvdheideJAL-2805 expanded tree and treenode interfaces tree | commitdiff
2017-11-16 kjvdheideJAL-2805 loads of file reorganizing, interfaces expanded tree | commitdiff
2017-11-15 kjvdheideJAL-2805 functional binding on loading associated trees tree | commitdiff
2017-11-14 kjvdheideJAL-2805 viewport is passed along to the tree parser tree | commitdiff
2017-11-14 kjvdheideJAL-2795 added duplication check when calculated nodes... tree | commitdiff
2017-11-14 kjvdheideJAL-2805 added getters for hashmaps filled with associa... tree | commitdiff
2017-11-14 kjvdheideJAL-2805 added static method for logging duplications... tree | commitdiff
2017-11-14 kjvdheideJAL-2805 more sensible interface method params tree | commitdiff
2017-11-14 kjvdheideJAL-2805 finished up interface comments tree | commitdiff
2017-11-14 kjvdheideJAL-2805 re-enabled one2many checks tree | commitdiff
2017-11-14 kjvdheideJAL-2805 interface comments, progress on associating... tree | commitdiff
2017-11-13 kjvdheideJAL-2805 interface comments tree | commitdiff
2017-11-13 kjvdheideJAL-2805 some more name changes tree | commitdiff
2017-11-13 kjvdheideJAL-2805 more name changes for clarity tree | commitdiff
2017-11-13 kjvdheideJAL-2805 more interface name changing tree | commitdiff
2017-11-13 kjvdheideJAL-2805 name changed of interfaces for consistency tree | commitdiff
2017-11-13 kjvdheideJAL-2805 Jalview sequence binding interface expanded tree | commitdiff
2017-11-13 kjvdheideJAL-2805 TreeParser now interface based tree | commitdiff
2017-11-13 kjvdheideJAL-2805 Added tree building interface tree | commitdiff
2017-11-13 kjvdheideJAL-2805 name change tree | commitdiff
2017-11-13 kjvdheideJAL-2805 deleted old Aptx class for loading just Newick... tree | commitdiff
2017-11-13 kjvdheideJAL-2805 more interface work tree | commitdiff
2017-11-13 kjvdheideJAL-2794 removed unused interface tree | commitdiff
2017-11-13 kjvdheideJAL-2805 undid accidental double (buggy) binding, more... tree | commitdiff
2017-11-13 kjvdheideJAL-2805 warning messages added if Forester detects... tree | commitdiff
2017-11-13 kjvdheideJAL-2805 First try at loading tree through Forester... tree | commitdiff
2017-11-13 gmungocJAL-2679 example accession changed to CAD01290 tree | commitdiff
2017-11-10 kjvdheideJAL-2794 reorganized node select code, added subtree... tree | commitdiff
2017-11-10 kjvdheideJAL-2794 comments comments comments tree | commitdiff
2017-11-10 kjvdheideJAL-2794 most method parameters/class variables made... tree | commitdiff
2017-11-10 kjvdheideJAL-2794 comments, selected node now doesn't have to... tree | commitdiff
2017-11-09 kjvdheideJAL-2794 PaintRefresher support, Aptx node selection... tree | commitdiff
2017-11-09 kjvdheideJAL-2794 interface comment tree | commitdiff
2017-11-09 kjvdheideJAL-2794 Made HashMap with Nodes as keys and sequences... tree | commitdiff
2017-11-08 kjvdheideJAL-2794 Aptx instances get their parent alignment... tree | commitdiff
2017-11-08 kjvdheideJAL-2794 Cleaning up tree conversion, sequences are... tree | commitdiff
2017-11-08 kjvdheideJAL-2795 created static class for forester conversions tree | commitdiff
2017-11-08 kjvdheideJAL-2794 Interface name change (oops) tree | commitdiff
2017-11-08 kjvdheideJAL-2794 made JalviewTreeViewerBinding an interface tree | commitdiff
2017-11-03 kjvdheideJAL-2794 created tree viewer binding class tree | commitdiff
2017-11-03 kjvdheideJAL-2795 bunch of cleanup and comments tree | commitdiff
2017-11-02 kjvdheideJAL-2795 added back test loop for Aptx tree naming... tree | commitdiff
2017-11-02 kjvdheideJAL-2795 Reverted code changes needed to cluster from... tree | commitdiff
2017-11-02 kjvdheideJAL-2795 Forester now NJ-clusters the DistanceMatrix... tree | commitdiff
2017-11-02 kjvdheideJAL-2795 moved matrix conversion to the ForesterMatrix... tree | commitdiff
2017-11-01 kjvdheideJAL-2795 Sequence[] references now as SequenceI[] ... tree | commitdiff
2017-11-01 kjvdheideJAL-2795 removed sequences[] class variable, more comments tree | commitdiff
2017-10-30 kjvdheideJAL-2795 added error catching for invalid identifier tree | commitdiff
2017-10-30 kjvdheideJAL-2795 changed getting index of identifier to Stream... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 rebuilt MatrixConverter to be purely static tree | commitdiff
2017-10-30 kjvdheideJAL-2795 finalized method arguments; commited forester... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 removed unneeded for loop (woops) and initiali... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 implemented getting/setting identifiers tree | commitdiff
2017-10-30 kjvdheideJAL-2795 added comments links from ForesterMatrix to... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 removed now unneeded values variable in Forest... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 add get for all matrix values to MatrixI ... tree | commitdiff
2017-10-30 kjvdheideJAL-2795 foresterMatrix now stores distance values... tree | commitdiff
2017-10-29 kjvdheideJAL-2795 more matrix implementations tree | commitdiff
2017-10-28 kjvdheideJAL-2795 moved ForesterMatrix to ext.forester tree | commitdiff
2017-10-28 kjvdheideJAL-2795 Added get and set values to the converted... tree | commitdiff
2017-10-27 kjvdheideJAL-2795 start of Jalview's Matrix conversion tree | commitdiff
2017-10-26 kjvdheideStart of matrix converter tree | commitdiff
2017-10-26 kjvdheideAdded proper title to aptx trees tree | commitdiff
2017-10-26 kjvdheideAdded TreeBuilder as parameter to the converter constructor tree | commitdiff
2017-10-26 kjvdheideName changed of aptx treebuilder to treeconverter tree | commitdiff
2017-10-26 kjvdheidenamed most Jalview threads tree | commitdiff
2017-10-25 kjvdheidefinished up tests for trees made from jalview data tree | commitdiff
2017-10-25 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... tree | commitdiff
2017-10-24 kjvdheideTests for Aptx tree created from a Phylogeny object... tree | commitdiff
2017-10-24 kjvdheideMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop tree | commitdiff
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress... tree | commitdiff
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle... tree | commitdiff
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253 tree | commitdiff
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain tree | commitdiff
2017-10-13 kjvdheidebasic tests for Aptx tree | commitdiff
2017-10-13 kjvdheideArchaeopteryxInit is now static tree | commitdiff
2017-10-13 kjvdheidesimplified aptx frame creation code tree | commitdiff
2017-10-13 kjvdheideSlight Aptx colour change tree | commitdiff
2017-10-12 kjvdheideCustom aptx configuration added tree | commitdiff
2017-10-12 kjvdheidemoved Aptx creation from CalculationChooser to separate... tree | commitdiff
2017-10-12 kjvdheideCreated test class for Archaeopteryx tree viewing tree | commitdiff
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