| 2018-01-15 |
kiramt | JAL-2759 Refactor of hideInsertionsFor after review |
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| 2017-11-08 |
kiramt | Merge branch 'develop' into feature/JAL-2759 |
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| 2017-10-26 |
Jim Procter | Merge branch 'feature/JAL-2488finalize' into develop |
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| 2017-10-25 |
Jim Procter | Merge branch 'bug/JAL-2727closeAllFreeMemory' into... |
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| 2017-10-12 |
Jim Procter | JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview |
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| 2017-09-26 |
kiramt | JAL-2674 more List<int[]> -> HiddenColumns copy changes |
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| 2017-09-26 |
kiramt | JAL-2674 Changes to pasting |
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| 2017-09-12 |
gmungoc | JAL-2727 ensure ViewportRanges (and gapcounts) are... |
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| 2017-09-01 |
gmungoc | JAL-2488 remove finalize methods |
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| 2017-08-29 |
Jim Procter | JAL-2698 spawn a thread to test for and raise auto... |
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| 2017-08-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList |
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| 2017-08-16 |
Jim Procter | JAL-2418 source formatting |
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| 2017-08-09 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
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| 2017-08-07 |
Jim Procter | Merge branch 'bug/JAL-2592userDefinedScheme' into develop |
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| 2017-08-02 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
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| 2017-07-28 |
kiramt | JAL-2632 Added paintAlignment(true) to show cols code |
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| 2017-07-19 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
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| 2017-07-04 |
gmungoc | JAL-147 remove redundant calls to update overview panel |
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| 2017-07-04 |
gmungoc | JAL-2608 tidy up OverviewPanel when closed |
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| 2017-06-29 |
gmungoc | JAL-147 improved wrapped scrolling (including Overview... |
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| 2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
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| 2017-06-26 |
gmungoc | JAL-1858 ensure full redraw on 'remove all selections' |
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| 2017-06-09 |
gmungoc | JAL-2592 distinguish "User Defined" (scheme name) from... bug/JAL-2592userDefinedScheme |
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| 2017-06-08 |
kiramt | JAL-2591 Refactor HiddenColumns to use ArrayList instea... |
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| 2017-06-07 |
kiramt | JAL-2591 Further refactoring (still incomplete) |
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| 2017-06-07 |
kiramt | JAL-2591 More refactoring (incomplete) |
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| 2017-06-07 |
kiramt | JAL-2591 More rationalising of hiddencols |
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| 2017-06-07 |
kiramt | JAL-2591 simplifying hidden columns usage |
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| 2017-05-29 |
Jim Procter | Merge branch 'bug/JAL-2536' into develop |
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| 2017-05-16 |
kiramt | JAL-2536 Overview window sizing not subject to min... bug/JAL-2536 |
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| 2017-05-15 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
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| 2017-05-12 |
Jim Procter | Merge branch 'features/JAL-2388OverviewWindow' into... |
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| 2017-05-11 |
kiramt | JAL-2491 Unit tests and updates |
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| 2017-05-08 |
gmungoc | JAL-1632 i18n for warning messages |
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| 2017-05-08 |
kiramt | JAL-2491 Started moving other scrolling fns into viewpo... |
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| 2017-05-05 |
kiramt | Merge remote-tracking branch |
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| 2017-05-05 |
kiramt | Merge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges |
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| 2017-05-02 |
gmungoc | JAL-2499 JAL-2403 push 'configure for view' inside... |
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| 2017-04-25 |
kiramt | JAL-2388 Working hidden regions hide/show in desktop |
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| 2017-04-24 |
kiramt | JAL-2388 Hidden cols separated from column selection... |
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| 2017-04-12 |
gmungoc | JAL-1632 removed check for aligned sequences for Tree... |
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| 2017-04-12 |
gmungoc | JAL-1632 one PCA/Tree per panel, closed when panel... |
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| 2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
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| 2017-04-05 |
gmungoc | JAL-2361 simplify constructors, select unsaved but... |
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| 2017-03-31 |
gmungoc | Merge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView |
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| 2017-03-30 |
gmungoc | JAL-1608 leave Create Group, Remove Group menu items... |
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| 2017-03-29 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups |
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| 2017-03-24 |
gmungoc | JAL-1632 TreeChooser renamed CalculationChooser, text... |
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| 2017-03-24 |
gmungoc | JAL-838 move two callers off Comparison.PID and depreca... |
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| 2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
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| 2017-03-16 |
kiramt | JAL-2388 Applied ViewportRanges to code |
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| 2017-03-15 |
gmungoc | JAL-2431 show cDNA consensus after New View in split... |
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| 2017-02-27 |
kiramt | JAL-2388 Make startRes,startSeq,endRes,endSeq private... |
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| 2017-02-27 |
gmungoc | JAL-1632 similarity options on TreeChooser panel affect... |
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| 2017-02-27 |
gmungoc | JAL-1632 refactored NJTree constructor to include Simil... |
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| 2017-02-23 |
gmungoc | JAL-2403 JAL-1483 changes to ScoreModelI hierarchy... |
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| 2017-02-20 |
gmungoc | JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix... |
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| 2017-02-17 |
gmungoc | JAL-2423 refactored method to build panel title for... |
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| 2017-02-14 |
gmungoc | Parsing moved to (new) ScoreMatrixFile, drag and drop... |
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| 2017-02-13 |
gmungoc | JAL-1632 first cut of Tree chooser dialog and ScoreMode... |
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| 2017-02-09 |
gmungoc | JAL-1608 menu entry text; enable/disable Create/Remove... |
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| 2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
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| 2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
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| 2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refact... |
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| 2017-01-23 |
gmungoc | JAL-2386 simplify changeColour (doesn't change colour... |
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| 2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
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| 2017-01-17 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
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| 2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
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| 2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
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| 2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
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| 2016-12-22 |
gmungoc | JAL-2360 structure viewers now using ColourMenuHelper... |
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| 2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
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| 2016-12-20 |
gmungoc | JAL-2360 testRegisterColourScheme to demonstrate a... |
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| 2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
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| 2016-12-19 |
gmungoc | JAL-2361 select colour menu item by matching its name... |
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| 2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
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| 2016-12-12 |
gmungoc | JAL-2361 extract methods to (re-)build colour menu |
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| 2016-12-09 |
gmungoc | JAL-1895 suppress RNA interaction colour option |
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| 2016-12-07 |
gmungoc | JAL-2344 handle null format, simplify JalviewFileChoose... |
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| 2016-11-29 |
gmungoc | JAL-2344 FileFormat.isStructureFile replaces |
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| 2016-11-28 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-25 |
gmungoc | Merge branch 'develop' into trialMerge |
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| 2016-11-25 |
gmungoc | JAL-2344 use .equals() to compare FileFormatI objects |
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| 2016-11-24 |
tcofoegbu | JAL-2326 updated references of JOptionPane to JvOptionPane |
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| 2016-11-24 |
gmungoc | Further tweaks to get tests passing |
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| 2016-11-24 |
gmungoc | FileFormatI further tweaks, clean compile |
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| 2016-11-22 |
Jim Procter | Merge branch 'features/JAL-1738_JAL-345_selectionfromhi... |
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| 2016-11-22 |
Jim Procter | JAL-1738 JAL-345 changed keystroke to ‘B’ (with modifie... |
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| 2016-11-14 |
tcofoegbu | JAL-2322 Refactored unified architecture for data ... |
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| 2016-11-11 |
tcofoegbu | JAL-2277 Refactored out duplicated method - printUnwrap... |
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| 2016-11-02 |
Jim Procter | JAL-345 JAL-1738 menu item, AlignFrame action listener... |
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| 2016-11-01 |
tcofoegbu | JAL-2280 refactored and improved structure file identif... |
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| 2016-10-28 |
Jim Procter | JAL-966 SearchResultsI now on viewmodels.AlignmentViewp... |
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| 2016-10-27 |
tcofoegbu | JAL-2280 Improvement to enable drag'n'drop association... |
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| 2016-10-26 |
tcofoegbu | JAL-2284 basic support for exporting BioJS MSA viewer... features/JAL-2284_export-biojsmsa-via-cli |
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| 2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
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| 2016-10-24 |
Jim Procter | Merge branch 'releases/Release_2_10_0_Branch' |
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| 2016-10-17 |
kiramt | acceptDrop call added before getTransferable in alignme... bug/JAL-1552dragndroptake2 |
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