| 2007-04-02 |
amwaterhouse | Destroy Alignment when closing frame |
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| 2007-03-22 |
amwaterhouse | Set gatherViewsHere false when making a new tab |
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| 2007-03-19 |
jprocter | translate aligned cDNA to aligned peptide |
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| 2007-02-27 |
amwaterhouse | Use paintAlignment |
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| 2007-02-12 |
amwaterhouse | Reload jar files |
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| 2007-02-09 |
jprocter | added 'show overview' preference. |
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| 2007-02-07 |
amwaterhouse | Formatting |
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| 2007-02-07 |
amwaterhouse | reload, just close this frame and open a new one |
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| 2007-01-31 |
amwaterhouse | Can edit annotation name/description |
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| 2007-01-31 |
amwaterhouse | Dont export annotations if not visible |
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| 2007-01-30 |
amwaterhouse | Output groups in annotation file |
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| 2007-01-29 |
amwaterhouse | scaleAbove, left and right set when tab selection changes |
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| 2007-01-25 |
amwaterhouse | Annotations move when full alignment edited |
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| 2007-01-24 |
amwaterhouse | Page setup added |
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| 2007-01-23 |
amwaterhouse | boolean for internal copies |
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| 2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
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| 2007-01-19 |
amwaterhouse | Neeed to know protocol for annotation loading |
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| 2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[] |
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| 2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
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| 2006-11-30 |
amwaterhouse | Warning message if file was not saved, repaint ids... |
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| 2006-11-28 |
amwaterhouse | Tree title |
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| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
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| 2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
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| 2006-11-24 |
amwaterhouse | seqColours null |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
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| 2006-11-23 |
amwaterhouse | Associate PCA with multiple views |
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| 2006-11-22 |
amwaterhouse | Dynamically build tree sort menu when sort menu is... |
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| 2006-11-22 |
amwaterhouse | Renaming viewNames |
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| 2006-11-21 |
jprocter | fix unselectable tree leaf nodes when node mapping... |
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| 2006-11-21 |
amwaterhouse | expanded views, j2xml use setinitialtabvisible, close... |
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| 2006-11-21 |
amwaterhouse | Use textColourChooser |
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| 2006-11-20 |
amwaterhouse | expand and gather |
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| 2006-11-20 |
amwaterhouse | look for current alignframe to search |
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| 2006-11-15 |
amwaterhouse | Add remove seq from multiple views, must fire alignment... |
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| 2006-11-15 |
amwaterhouse | right align ids |
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| 2006-11-14 |
amwaterhouse | Paintrefresh alignpanel |
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| 2006-11-13 |
amwaterhouse | REload from URL |
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| 2006-11-13 |
amwaterhouse | Text colour adapter |
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| 2006-11-09 |
amwaterhouse | remove system.out |
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| 2006-11-09 |
amwaterhouse | smooth font gone, setFileName and close open alignPanel |
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| 2006-11-08 |
amwaterhouse | Reload alignment |
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| 2006-11-08 |
amwaterhouse | Reload alignment |
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| 2006-11-06 |
amwaterhouse | Only recalc consensus for start to end of group |
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| 2006-11-06 |
amwaterhouse | accelerators, save menu item |
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| 2006-11-03 |
amwaterhouse | Alignpanel is not new if copied from j2xml |
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| 2006-11-03 |
amwaterhouse | Use Jalview2XML to copy AlignmentPanel |
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| 2006-11-02 |
amwaterhouse | selected states set in updateMenusFromViewport |
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| 2006-10-27 |
amwaterhouse | PaintRefresher can calculate seqs added or removed |
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| 2006-10-26 |
amwaterhouse | Only adds history item if size>0 |
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| 2006-10-26 |
amwaterhouse | Dont readd the undo |
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| 2006-10-26 |
amwaterhouse | remove gaps size range |
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| 2006-10-25 |
amwaterhouse | viewport.hasHiddenColumns updated after undo/redo performed |
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| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI |
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| 2006-10-18 |
amwaterhouse | No longer a FeatureListener |
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| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservat... |
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| 2006-10-10 |
amwaterhouse | No need to find index when deleting |
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| 2006-10-10 |
amwaterhouse | Consensus and conservation updated in threads |
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| 2006-10-09 |
jprocter | imported Vamsas bindings and alpha vamsas client code... |
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| 2006-10-06 |
jprocter | Added filter so that input to a JPred job is *solely... |
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| 2006-10-06 |
amwaterhouse | AAFrequency optimized |
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| 2006-10-05 |
amwaterhouse | Multiple Views |
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| 2006-09-27 |
jprocter | fixed tree building exception when one residue or a... |
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| 2006-08-29 |
amwaterhouse | jnetfile can be loaded onto alignment |
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| 2006-08-21 |
amwaterhouse | header updated |
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| 2006-08-21 |
jprocter | Refactored Jnet and added hidden columns support. |
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| 2006-08-17 |
jprocter | moved visible sub-alignment extraction and update from... |
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| 2006-08-16 |
amwaterhouse | Fire alignment changed if seqs hidden / revealed |
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| 2006-08-15 |
amwaterhouse | Setselectiongroup null on hide |
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| 2006-08-10 |
amwaterhouse | Only add 1 feature settings table |
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| 2006-08-10 |
amwaterhouse | Invert column selection |
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| 2006-08-09 |
amwaterhouse | Null hidden cols check |
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| 2006-08-04 |
jprocter | recover original data for tree and pca as alignment... |
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| 2006-07-28 |
amwaterhouse | Remove system.out |
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| 2006-07-27 |
amwaterhouse | seq size cant be less than 2 for tree |
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| 2006-07-26 |
amwaterhouse | back to org.biojava |
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| 2006-07-26 |
amwaterhouse | Column hide/show updated |
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| 2006-07-25 |
amwaterhouse | ColumnSelection moved to datamodel |
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| 2006-07-25 |
amwaterhouse | Repaint |
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| 2006-07-25 |
amwaterhouse | jalview.biojava |
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| 2006-07-25 |
amwaterhouse | FileLoader replaces paste when Dropping files |
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| 2006-07-21 |
amwaterhouse | getViewAsString can ignore sequenceGroup |
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| 2006-07-21 |
amwaterhouse | Show hide cols and rows |
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| 2006-07-19 |
amwaterhouse | Save output use whole alignment |
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| 2006-07-19 |
amwaterhouse | Copy works with selection area |
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| 2006-07-18 |
amwaterhouse | Use selection area with hidden columns in calculations |
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| 2006-07-13 |
amwaterhouse | DAS feature retrieval updated |
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| 2006-07-12 |
amwaterhouse | sequences are private in SequenceGroup |
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| 2006-07-07 |
amwaterhouse | changeColour is public |
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| 2006-06-23 |
amwaterhouse | Parse HTML links from jalview features file |
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| 2006-06-23 |
amwaterhouse | No need for repaint |
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| 2006-06-22 |
amwaterhouse | Fetch DBRefs |
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| 2006-06-15 |
amwaterhouse | Correct citation |
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| 2006-06-09 |
amwaterhouse | Feature and annotation parsing moved to io |
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| 2006-06-07 |
amwaterhouse | Wrap alignment added to preferences |
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| 2006-06-07 |
amwaterhouse | new DasSequenceFetcher |
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| 2006-05-17 |
amwaterhouse | Restrict annotation panel to 50% window on load |
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| 2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to fireproperty... |
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| next |
git://source.jalview.org / jalview.git / history