}
Vector seqs = new Vector();
- int cutLength = sg.getEndRes()-sg.getStartRes()+1;
- boolean seqsCut = false;
SequenceI seq;
for (int i = 0; i < sg.getSize(false); i++)
{
seq = sg.getSequenceAt(i);
seqs.addElement(seq);
- if(seq.getLength()<=cutLength)
- seqsCut = true;
}
alignPanel.seqPanel.seqCanvas.highlightSearchResults(null);
alignPanel.idPanel.idCanvas.searchResults = null;
alignPanel.repaint();
- PaintRefresher.Refresh(this, viewport.getSequenceSetId());
+ PaintRefresher.Refresh(alignPanel, viewport.getSequenceSetId());
}
/**
sg.addOrRemove(viewport.getAlignment().getSequenceAt(i), false);
}
- PaintRefresher.Refresh(this, viewport.getSequenceSetId());
+ PaintRefresher.Refresh(alignPanel, viewport.getSequenceSetId());
}
public void invertColSel_actionPerformed(ActionEvent e)