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JAL-3878 Clear services list on reload.
[jalview.git]
/
src
/
jalview
/
gui
/
AlignFrame.java
2021-07-25
Jim Procter
JAL-3848 reinstate Fetch DB References submenu
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commitdiff
2021-02-22
Mateusz Warowny
JAL-3809 - Fixed param edit dialog for jalviewjs.
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diff to current
2020-12-14
Jim Procter
Merge branch 'Jalview-JS/develop' into merge_js_develop
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diff to current
2020-12-11
Mateusz
JAL-3690 Let's enable web services (seriously this...
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diff to current
2020-11-13
Mateusz Waronwy
JAL-3690 separate startup and poll code in SeqAnnotatio...
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commitdiff
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diff to current
2020-07-20
Mateusz Warowny
JAL-3690 alternative servers menu fix
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commitdiff
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diff to current
2020-07-17
Mateusz Warowny
JAL-3690 restore jws1 JPred
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commitdiff
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diff to current
2020-07-15
Mateusz Warowny
JAL-3690 refactoring web-services discovery
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diff to current
2020-07-09
Mateusz Warowny
Merge branch 'feature/JAL-3686_slivka_client_js_update...
alpha/merge_212_JalviewJS_2112
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diff to current
2020-06-12
BobHanson
JAL-3446 from applet -- reload; also fixes some repaint...
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diff to current
2020-06-10
BobHanson
JAL-3645 errant "g" in JavaDoc
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commitdiff
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diff to current
2020-06-10
BobHanson
JAL-3446 Dynamic menu - Moves calc sortby tree item...
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commitdiff
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diff to current
2020-06-09
BobHanson
JAL-3446 from applet; JAL-3374
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diff to current
2020-06-07
BobHanson
JAL-3446 reorganized JalviewJSApp (accidentally put...
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diff to current
2020-06-07
BobHanson
reorganized JalviewJSApp (accidentally put that in...
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commitdiff
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diff to current
2020-06-06
BobHanson
JAL-3446 no actual changes; just using meaningful frame...
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diff to current
2020-06-06
BobHanson
JAL-3446 adds Jmol viewer embedding.
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diff to current
2020-06-05
BobHanson
JAL-3446 removes all JalviewJSApp dependency from jalvi...
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diff to current
2020-06-05
BobHanson
Refactoring of Jalview, JalviewAppLoader, JalviewApp...
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diff to current
2020-06-03
BobHanson
JAL-3446 from JAL-3253 Discoverers
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commitdiff
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diff to current
2020-06-03
BobHanson
JAL-3446 from JAL-3253 ApplicationSingletonProvider...
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commitdiff
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diff to current
2020-06-02
BobHanson
JAL-3446 from JAL-3253-applet Desktop and Jws2Discovere...
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diff to current
2020-06-02
BobHanson
JAL-3626 from JAL-3253-applet Jalview.java
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commitdiff
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diff to current
2020-06-02
BobHanson
JAL-3626 from JAL-3253-applet web page embedding
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commitdiff
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diff to current
2020-06-01
BobHanson
JAL-3626 from JAL-3253-applet JalviewLite scrollTo...
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commitdiff
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diff to current
2020-06-01
BobHanson
JAL-3262 from JAL-3253-applet JalviewApp integration
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diff to current
2020-06-01
BobHanson
JAL-3262 from JAL-3253-applet JalviewApp integration
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diff to current
2020-05-18
Jim Procter
Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
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2020-04-23
Jim Procter
Merge branch 'develop' into alpha/JAL-3362_Jalview_212_...
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diff to current
2020-04-21
gmungoc
JAL-3603 load annotation file from RELATIVE_URL in...
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diff to current
2020-03-30
gmungoc
Merge branch 'develop' into Jalview-JS/develop
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diff to current
2020-02-21
Jim Procter
JAL-3186 avoid repainting twice in splitframe
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diff to current
2020-02-21
Jim Procter
Merge branch 'develop' into features/JAL-3187_uitweaks
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commitdiff
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diff to current
2020-02-20
gmungoc
JAL-3187 repaint complement after loading on features
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diff to current
2020-02-19
Jim Procter
JAL-3187 JAL-2764 close feature settings when parent...
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diff to current
2020-02-18
Jim Procter
JAl-3187 JAL-3535 JAL-3534 update open feature settings...
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diff to current
2020-02-17
Jim Procter
JAL-3187 fix for JAL-3533 on CDS/Protein tabbed feature...
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commitdiff
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diff to current
2020-02-17
Jim Procter
JAL-3187 JAL-3533 JAL-3535 set feature settings dialog...
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commitdiff
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diff to current
2020-02-12
Jim Procter
JAL-3187 view controller UI api method to show feature...
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commitdiff
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diff to current
2020-02-04
MMWarowny
JAL-3515 Extract core WSDiscoverer methods to a separat...
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commitdiff
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diff to current
2019-10-03
Jim Procter
JAL-3070 slivka service discovery as a background threa...
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commitdiff
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diff to current
2019-09-23
Jim Procter
JAL-3066 JAL-3070 pull up non-jabaws specific service...
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diff to current
2019-09-05
Mateusz Warowny
JAL-3066 Implement clustaloWS using slivka system.
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diff to current
2019-07-16
gmungoc
JAL-3210 Merge branch 'develop' into trialMerge
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diff to current
2019-07-15
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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commitdiff
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diff to current
2019-07-12
Thomas
JAL-2629 add sort by evalue and bit score
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commitdiff
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diff to current
2019-07-11
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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diff to current
2019-07-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
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diff to current
2019-07-10
tva
JAL-2629 fix incorrect hmmbuild on groups behaviour
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diff to current
2019-07-10
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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commitdiff
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diff to current
2019-07-03
tva
JAL-2629 can now filter by sequence e-value or bit...
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commitdiff
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diff to current
2019-07-02
tva
JAL-2629 add simple jackhmmer functionality
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commitdiff
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diff to current
2019-06-24
Jim Procter
JAL-3330 merge styles onto originating view after fetch...
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commitdiff
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diff to current
2019-06-04
Jim Procter
Merge branch 'develop' into developtomchmmer
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commitdiff
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diff to current
2019-05-28
Ben Soares
JAL-1988 Some TEST code accidentally left in now remove...
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commitdiff
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diff to current
2019-04-18
hansonr
Corrects incorrect calls to ViewportRanges.setEndSeq()
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commitdiff
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diff to current
2019-04-16
hansonr
caching of DnD files dropped
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diff to current
2019-04-11
Jim Procter
Merge branch 'develop' into task/JAL-3130_Java_11_inves...
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commitdiff
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diff to current
2019-04-03
hansonr
replacing @j2sNative with @j2sIgnore where appropriate...
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commitdiff
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diff to current
2019-03-31
hansonr
clean up implicit object refs
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diff to current
2019-03-27
hansonr
isJS cleanup
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diff to current
2019-03-23
gmungoc
Merge branch 'develop' into Jalview-JS/develop
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commitdiff
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diff to current
2019-03-23
gmungoc
JAL-1889 explicit recalc of geometry for scale left...
bug/JAL-1889serverTestSuite
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commitdiff
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diff to current
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
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diff to current
2019-03-20
gmungoc
Merge branch 'develop' into Jalview-JS/develop
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commitdiff
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diff to current
2019-03-20
gmungoc
JAL-3093 fine tuning of SeqPanel tooltip
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commitdiff
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diff to current
2019-03-19
Ben Soares
JAL-3130 Merge of JAL-3130_Java_11_investigations-Ben...
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commitdiff
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diff to current
2019-03-14
gmungoc
JAL-3210 JAL-3141 JAL-3056 disable backups in JalviewJS
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diff to current
2019-03-13
gmungoc
JAL-3141 fix up merge artefact so BackupFilesTest passes
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commitdiff
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diff to current
2019-03-13
gmungoc
Merge branch 'develop' into trialMerge
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commitdiff
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diff to current
2019-03-11
gmungoc
Merge branch 'feature/JAL-3127_seqidChainshading' into...
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commitdiff
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diff to current
2019-03-07
gmungoc
Merge branch 'feature/JAL-3180colourAnnotationMenu...
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commitdiff
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diff to current
2019-03-07
gmungoc
JAL-2250 default Apply Colour to All Groups selected
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diff to current
2019-03-05
gmungoc
Merge remote-tracking branch 'origin/features/JAL-2620a...
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diff to current
2019-03-04
gmungoc
Merge branch 'bug/JAL-3099alignmentVisibleWidth' into...
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diff to current
2019-03-01
gmungoc
Merge branch 'feature/JAL-3093wrappedModeTooltips'...
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diff to current
2019-03-01
gmungoc
Merge branch 'bug/JAL-3158selectionBroadcasts' into...
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2019-02-28
gmungoc
Merge remote-tracking branch 'origin/feature/JAL-3141_b...
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diff to current
2019-02-28
Jim Procter
Merge branch 'feature/JAL-3141_backupfiles_for211'...
merge/develop_feature/JAL-3141_backupfiles_for211
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diff to current
2019-02-24
gmungoc
JAL-3198 SequenceGroup 'bulk constructor' without dupli...
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diff to current
2019-02-22
gmungoc
JAL-2915 don't recalculate Overview on scroll to positi...
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commitdiff
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diff to current
2019-02-05
gmungoc
JAL-3048 JS-compatible confirm dialog on delete all
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2019-01-26
hansonr
Jalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
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diff to current
2019-01-18
Jim Procter
Merge branch 'feature/JAL-3063jaxbNoCastor' into featur...
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diff to current
2019-01-18
hansonr
canvas line/font/pixel fixes; menu accelerators;
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commitdiff
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diff to current
2019-01-15
hansonr
removal of AlignmentFrame lines
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commitdiff
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diff to current
2019-01-09
gmungoc
JAL-3032 refine 'empty status message' test (JS issue...
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commitdiff
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diff to current
2019-01-09
hansonr
comment added in relation to status bar
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commitdiff
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diff to current
2019-01-04
gmungoc
JAL-3180 fix By Annotation selection state in colour...
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commitdiff
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diff to current
2018-12-18
gmungoc
JAL-3048 DialogRunnerI reduced to minimal implementation
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commitdiff
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diff to current
2018-12-14
Ben Soares
JAL-3130 single class testing on CLI with ant [ -Dclass...
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commitdiff
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diff to current
2018-12-10
gmungoc
JAL-3048 wip externalise trigger from RunResponse
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commitdiff
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diff to current
2018-12-10
gmungoc
JAL-3048 DialogRunner changes (wip)
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commitdiff
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diff to current
2018-12-06
Ben Soares
JAL-3130 incorporating feature/JAL-3063jaxbNoCastor...
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commitdiff
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diff to current
2018-12-06
gmungoc
JAL-3048 response() renamed addResponse(); checkstyle...
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commitdiff
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diff to current
2018-11-28
gmungoc
JAL-3158 additional calls to reset 'selection changed...
bug/JAL-3158selectionBroadcasts
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commitdiff
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diff to current
2018-11-08
gmungoc
JAL-3048 use JalviewJS compatible JalviewFileChooser...
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commitdiff
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diff to current
2018-11-05
Ben Soares
JAL-1988 Investigating...
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commitdiff
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diff to current
2018-10-31
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into...
feature/JAL-3144noJTree
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diff to current
2018-10-29
gmungoc
JAL-3144 SequenceFetcher without JDatabaseTree
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