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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog
[jalview.git]
/
src
/
jalview
/
gui
/
AlignmentPanel.java
2012-09-06
jprocter
JAL-958 flag indicating if visualization settings for...
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diff to current
2012-07-02
jprocter
JAL-1129 progress bar - this patch doesn't provide...
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diff to current
2012-07-02
jprocter
JAL-968 incremental - PNG/EPS output has annotation...
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diff to current
2012-07-02
jprocter
tidy imports
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diff to current
2012-07-02
jprocter
JAL-974 - refactor FeatureRenderer constructor to Align...
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diff to current
2012-05-30
jprocter
JAL-1114 - refactor methods handling Vectors and Hashta...
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diff to current
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into JAL-976_jabaws...
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2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into develop
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diff to current
2011-11-09
jprocter
(JAL-986) rendering to imageMap counts as rendering...
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diff to current
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into develop
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2011-11-09
jprocter
(JAL-985,JAL-986) allow different ID margin calculation...
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diff to current
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
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diff to current
2011-10-21
jprocter
extend alignPanel api with OOMHandler call to raise...
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diff to current
2011-10-21
jprocter
remove unnecessary import
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diff to current
2011-10-14
jprocter
(JAL-958) - normalised sequence logo for applet
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diff to current
2011-10-11
jprocter
normalised logo rendering (JAL-958)
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diff to current
2011-10-10
jprocter
update author list in license for (JAL-826)
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diff to current
2011-09-27
jprocter
apply version 2.7 copyright
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diff to current
2011-07-22
jprocter
ensure propagation of colour change on annotation updat...
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diff to current
2011-05-17
jprocter
refactor to allow distinct StructureSelectionManager...
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diff to current
2011-04-21
jprocter
separated alignment annotation height calculation from...
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diff to current
2011-04-08
jprocter
todo
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diff to current
2011-02-18
jprocter
new alignmentPanel api + JAL-777/JAL-641 debugging
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diff to current
2011-02-04
jprocter
javadoc
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diff to current
2011-01-21
jprocter
logic bug for auto scrolling
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2011-01-18
jprocter
patch for JAL-695
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2010-09-23
jprocter
apply jalview code style
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diff to current
2010-09-23
jprocter
Jalview 2.6 source licence
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2010-06-11
jprocter
patched for JAL-531 - only display full symbol distribu...
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2010-06-04
jprocter
update group annotation for new treegroups (JAL-552)
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diff to current
2010-06-01
jprocter
patches for # JAL-254 and JAL-548
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2010-05-12
jprocter
debug comment
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2010-04-30
jprocter
jalview 2.5 release banner
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2010-04-14
jprocter
profile visualizations are now logos
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diff to current
2010-03-30
jprocter
group autoannotation and consensus display settings
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diff to current
2010-03-22
jprocter
ensure that all bits of annotation panel (slider, annot...
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diff to current
2009-08-21
jprocter
reversed order of addition of group consensus and conse...
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diff to current
2009-07-24
jprocter
annotation update method synchronises group annotation
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2009-06-19
jprocter
smoother scroll-to-position action
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diff to current
2009-06-08
jprocter
ensure listeners are deregistered when panel is closed...
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2009-02-24
jprocter
change method signature to allow caller to test if...
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diff to current
2008-11-12
jprocter
selection sending and receiving, autoscrolling to highl...
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diff to current
2008-09-04
jprocter
merge from 2_4_Release branch
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2008-06-30
jprocter
javadoc and constraint to ensure annotation labels...
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2007-10-31
jprocter
added bugfix todo
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2007-05-07
amwaterhouse
Image size must allow for scale height
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2007-04-18
amwaterhouse
checks for scrollbar height
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2007-04-16
amwaterhouse
Too many calls to paintAlignment
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2007-04-04
amwaterhouse
paintALignment
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2007-04-02
amwaterhouse
Allow for scroll bar height
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diff to current
2007-04-02
amwaterhouse
Must allow for scrollbar height
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2007-02-27
amwaterhouse
Use paintAlignment
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diff to current
2007-02-07
amwaterhouse
Formatting
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2007-02-02
amwaterhouse
22 = scrollbar and insets widthcvs diff gui/AlignmentPa...
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2007-02-02
amwaterhouse
Must allow for scollbar and frame insets when getting...
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diff to current
2007-02-01
amwaterhouse
get fontmetrics from pg
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2007-01-29
amwaterhouse
ID_ITALICS option in preferences
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2007-01-23
amwaterhouse
Hidden representatives moved from sequence to viewport
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2006-11-21
amwaterhouse
Right align print and images
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2006-11-13
amwaterhouse
colours in viewport
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2006-11-02
amwaterhouse
Update editMenuBar after alignment changed
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2006-10-27
amwaterhouse
PaintRefresher can calculate seqs added or removed
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2006-10-24
amwaterhouse
Must catch image outOfMemoryError
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2006-10-05
amwaterhouse
Multiple Views
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2006-09-12
amwaterhouse
Allow alt for group editing
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2006-09-11
amwaterhouse
Remove system.outs
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diff to current
2006-09-11
amwaterhouse
get idWidth should use italic font when getting size
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diff to current
2006-09-11
amwaterhouse
Remove system.out
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2006-09-11
amwaterhouse
getVisibleIdWidth() for making images
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2006-08-29
amwaterhouse
Additional repaint
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2006-08-21
amwaterhouse
header updated
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2006-08-17
amwaterhouse
H key updates
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2006-08-17
amwaterhouse
Hold onto selected region when hiding all columns only
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2006-08-17
amwaterhouse
control and shift
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2006-08-17
amwaterhouse
Control and alt for toggle hide
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2006-08-16
amwaterhouse
Fire alignment changed if seqs hidden / revealed
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2006-08-15
amwaterhouse
H key to hide / reveal
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diff to current
2006-07-27
amwaterhouse
Remove immediate call to repaint when deleting
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2006-07-19
amwaterhouse
Remove b keystroke
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diff to current
2006-07-18
amwaterhouse
Use selection area with hidden columns in calculations
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2006-07-12
amwaterhouse
sequences are private in SequenceGroup
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diff to current
2006-07-07
amwaterhouse
check control down if c pressed in cursor mode
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2006-06-23
amwaterhouse
Case wrapped jar file, wrapped preference true dealt...
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2006-06-22
amwaterhouse
AlignFrame is now the FeatureListener
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2006-06-15
amwaterhouse
FeatureRenderer synchronized featuresAdded method
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2006-06-14
amwaterhouse
Status is now in otherData of feature
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2006-06-07
amwaterhouse
Implements FeatureListener
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2006-05-17
amwaterhouse
Restrict annotation panel to 50% window on load
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diff to current
2006-05-15
amwaterhouse
If headless, get the width of Jalview wrapped window...
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2006-04-10
amwaterhouse
del and backspace do the same thing
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diff to current
2006-04-07
amwaterhouse
Scroll cursor wrapped alignment
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diff to current
2006-04-05
amwaterhouse
Shift also for group editing
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2006-04-04
amwaterhouse
More keys for editing
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2006-03-24
amwaterhouse
CursoMode added
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2006-03-16
amwaterhouse
getWidth and getHeight just once
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2006-02-24
amwaterhouse
Features now array
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2006-02-09
amwaterhouse
New implementation for holding search results
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2006-01-30
amwaterhouse
Fast paint update
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2005-12-22
amwaterhouse
Wrapped search scrolls to visible result
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2005-12-12
amwaterhouse
Font changes on export png/eps
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