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[jalview.git] / src / jalview / gui / AlignmentPanel.java

2011-09-27	jprocter	apply version 2.7 copyright	blob \| commitdiff \| diff to current
2011-07-22	jprocter	ensure propagation of colour change on annotation updat...	blob \| commitdiff \| diff to current
2011-05-17	jprocter	refactor to allow distinct StructureSelectionManager...	blob \| commitdiff \| diff to current
2011-04-21	jprocter	separated alignment annotation height calculation from...	blob \| commitdiff \| diff to current
2011-04-08	jprocter	todo	blob \| commitdiff \| diff to current
2011-02-18	jprocter	new alignmentPanel api + JAL-777/JAL-641 debugging	blob \| commitdiff \| diff to current
2011-02-04	jprocter	javadoc	blob \| commitdiff \| diff to current
2011-01-21	jprocter	logic bug for auto scrolling	blob \| commitdiff \| diff to current
2011-01-18	jprocter	patch for JAL-695	blob \| commitdiff \| diff to current
2010-09-23	jprocter	apply jalview code style	blob \| commitdiff \| diff to current
2010-09-23	jprocter	Jalview 2.6 source licence	blob \| commitdiff \| diff to current
2010-06-11	jprocter	patched for JAL-531 - only display full symbol distribu...	blob \| commitdiff \| diff to current
2010-06-04	jprocter	update group annotation for new treegroups (JAL-552)	blob \| commitdiff \| diff to current
2010-06-01	jprocter	patches for # JAL-254 and JAL-548	blob \| commitdiff \| diff to current
2010-05-12	jprocter	debug comment	blob \| commitdiff \| diff to current
2010-04-30	jprocter	jalview 2.5 release banner	blob \| commitdiff \| diff to current
2010-04-14	jprocter	profile visualizations are now logos	blob \| commitdiff \| diff to current
2010-03-30	jprocter	group autoannotation and consensus display settings	blob \| commitdiff \| diff to current
2010-03-22	jprocter	ensure that all bits of annotation panel (slider, annot...	blob \| commitdiff \| diff to current
2009-08-21	jprocter	reversed order of addition of group consensus and conse...	blob \| commitdiff \| diff to current
2009-07-24	jprocter	annotation update method synchronises group annotation	blob \| commitdiff \| diff to current
2009-06-19	jprocter	smoother scroll-to-position action	blob \| commitdiff \| diff to current
2009-06-08	jprocter	ensure listeners are deregistered when panel is closed...	blob \| commitdiff \| diff to current
2009-02-24	jprocter	change method signature to allow caller to test if...	blob \| commitdiff \| diff to current
2008-11-12	jprocter	selection sending and receiving, autoscrolling to highl...	blob \| commitdiff \| diff to current
2008-09-04	jprocter	merge from 2_4_Release branch	blob \| commitdiff \| diff to current
2008-06-30	jprocter	javadoc and constraint to ensure annotation labels...	blob \| commitdiff \| diff to current
2007-10-31	jprocter	added bugfix todo	blob \| commitdiff \| diff to current
2007-05-07	amwaterhouse	Image size must allow for scale height	blob \| commitdiff \| diff to current
2007-04-18	amwaterhouse	checks for scrollbar height	blob \| commitdiff \| diff to current
2007-04-16	amwaterhouse	Too many calls to paintAlignment	blob \| commitdiff \| diff to current
2007-04-04	amwaterhouse	paintALignment	blob \| commitdiff \| diff to current
2007-04-02	amwaterhouse	Allow for scroll bar height	blob \| commitdiff \| diff to current
2007-04-02	amwaterhouse	Must allow for scrollbar height	blob \| commitdiff \| diff to current
2007-02-27	amwaterhouse	Use paintAlignment	blob \| commitdiff \| diff to current
2007-02-07	amwaterhouse	Formatting	blob \| commitdiff \| diff to current
2007-02-02	amwaterhouse	22 = scrollbar and insets widthcvs diff gui/AlignmentPa...	blob \| commitdiff \| diff to current
2007-02-02	amwaterhouse	Must allow for scollbar and frame insets when getting...	blob \| commitdiff \| diff to current
2007-02-01	amwaterhouse	get fontmetrics from pg	blob \| commitdiff \| diff to current
2007-01-29	amwaterhouse	ID_ITALICS option in preferences	blob \| commitdiff \| diff to current
2007-01-23	amwaterhouse	Hidden representatives moved from sequence to viewport	blob \| commitdiff \| diff to current
2006-11-21	amwaterhouse	Right align print and images	blob \| commitdiff \| diff to current
2006-11-13	amwaterhouse	colours in viewport	blob \| commitdiff \| diff to current
2006-11-02	amwaterhouse	Update editMenuBar after alignment changed	blob \| commitdiff \| diff to current
2006-10-27	amwaterhouse	PaintRefresher can calculate seqs added or removed	blob \| commitdiff \| diff to current
2006-10-24	amwaterhouse	Must catch image outOfMemoryError	blob \| commitdiff \| diff to current
2006-10-05	amwaterhouse	Multiple Views	blob \| commitdiff \| diff to current
2006-09-12	amwaterhouse	Allow alt for group editing	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	Remove system.outs	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	get idWidth should use italic font when getting size	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	Remove system.out	blob \| commitdiff \| diff to current
2006-09-11	amwaterhouse	getVisibleIdWidth() for making images	blob \| commitdiff \| diff to current
2006-08-29	amwaterhouse	Additional repaint	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	H key updates	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	Hold onto selected region when hiding all columns only	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	control and shift	blob \| commitdiff \| diff to current
2006-08-17	amwaterhouse	Control and alt for toggle hide	blob \| commitdiff \| diff to current
2006-08-16	amwaterhouse	Fire alignment changed if seqs hidden / revealed	blob \| commitdiff \| diff to current
2006-08-15	amwaterhouse	H key to hide / reveal	blob \| commitdiff \| diff to current
2006-07-27	amwaterhouse	Remove immediate call to repaint when deleting	blob \| commitdiff \| diff to current
2006-07-19	amwaterhouse	Remove b keystroke	blob \| commitdiff \| diff to current
2006-07-18	amwaterhouse	Use selection area with hidden columns in calculations	blob \| commitdiff \| diff to current
2006-07-12	amwaterhouse	sequences are private in SequenceGroup	blob \| commitdiff \| diff to current
2006-07-07	amwaterhouse	check control down if c pressed in cursor mode	blob \| commitdiff \| diff to current
2006-06-23	amwaterhouse	Case wrapped jar file, wrapped preference true dealt...	blob \| commitdiff \| diff to current
2006-06-22	amwaterhouse	AlignFrame is now the FeatureListener	blob \| commitdiff \| diff to current
2006-06-15	amwaterhouse	FeatureRenderer synchronized featuresAdded method	blob \| commitdiff \| diff to current
2006-06-14	amwaterhouse	Status is now in otherData of feature	blob \| commitdiff \| diff to current
2006-06-07	amwaterhouse	Implements FeatureListener	blob \| commitdiff \| diff to current
2006-05-17	amwaterhouse	Restrict annotation panel to 50% window on load	blob \| commitdiff \| diff to current
2006-05-15	amwaterhouse	If headless, get the width of Jalview wrapped window...	blob \| commitdiff \| diff to current
2006-04-10	amwaterhouse	del and backspace do the same thing	blob \| commitdiff \| diff to current
2006-04-07	amwaterhouse	Scroll cursor wrapped alignment	blob \| commitdiff \| diff to current
2006-04-05	amwaterhouse	Shift also for group editing	blob \| commitdiff \| diff to current
2006-04-04	amwaterhouse	More keys for editing	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	CursoMode added	blob \| commitdiff \| diff to current
2006-03-16	amwaterhouse	getWidth and getHeight just once	blob \| commitdiff \| diff to current
2006-02-24	amwaterhouse	Features now array	blob \| commitdiff \| diff to current
2006-02-09	amwaterhouse	New implementation for holding search results	blob \| commitdiff \| diff to current
2006-01-30	amwaterhouse	Fast paint update	blob \| commitdiff \| diff to current
2005-12-22	amwaterhouse	Wrapped search scrolls to visible result	blob \| commitdiff \| diff to current
2005-12-12	amwaterhouse	Font changes on export png/eps	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	Allow for DNA alignments in imgMap	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	Make ImageMap for features as well as groups	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	After merge	blob \| commitdiff \| diff to current
2005-10-03	amwaterhouse	Keylistener added to internalFrame	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-09-27	amwaterhouse	Show labels in wrapped view	blob \| commitdiff \| diff to current
2005-09-22	amwaterhouse	SetAnnotationVisible - ignore if wrapped	blob \| commitdiff \| diff to current
2005-09-22	amwaterhouse	Wrap alignment with annotations	blob \| commitdiff \| diff to current
2005-09-14	amwaterhouse	OutOfMemory try catch	blob \| commitdiff \| diff to current
2005-09-14	amwaterhouse	System.gc after outofmemory	blob \| commitdiff \| diff to current
2005-09-13	amwaterhouse	EPSOptions added	blob \| commitdiff \| diff to current
2005-09-12	amwaterhouse	Dont fastpaint if movement is zero	blob \| commitdiff \| diff to current
2005-09-08	amwaterhouse	Optimise switch to fastPaint	blob \| commitdiff \| diff to current
2005-09-01	amwaterhouse	Use propertyListener for alignment edits	blob \| commitdiff \| diff to current
2005-08-30	amwaterhouse	Set startSeq 0 if wrap alignment	blob \| commitdiff \| diff to current
2005-08-26	amwaterhouse	Update overviewImage if font changed	blob \| commitdiff \| diff to current
2005-08-22	amwaterhouse	Mosue wheel moved to seqpanel	blob \| commitdiff \| diff to current
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