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[jalview.git] / src / jalview / gui / AnnotationLabels.java

2023-11-03	James Procter	JAL-4090 JAL-1551 spotlessApply	blob \| commitdiff
2023-10-31	James Procter	JAL-4260 right align the annotation labels regardless...	blob \| commitdiff \| diff to current
2023-10-31	James Procter	JAL-244 noticed NPE exception was possible when visibil...	blob \| commitdiff \| diff to current
2023-10-01	James Procter	JAL-244 JAL-4091 allow calculation of label id width...	blob \| commitdiff \| diff to current
2023-09-07	James Procter	JAL-4273 release notes for visible adjuster marks,...	blob \| commitdiff \| diff to current
2023-08-18	Ben Soares	Merge branch 'feature/JAL-244_Automatically_adjust_left...	blob \| commitdiff \| diff to current
2023-08-10	Ben Soares	JAL-629 Change all stdout and stderr output to use...	blob \| commitdiff \| diff to current
2023-08-08	Ben Soares	JAL-244 Added light grey marks to indicate regions...	blob \| commitdiff \| diff to current
2023-08-07	Ben Soares	JAL-244 Avoid working on the Ids Graphics object when...	blob \| commitdiff \| diff to current
2023-08-01	Ben Soares	JAL-244 More control of automatic idWidth adjustments...	blob \| commitdiff \| diff to current
2023-07-27	Ben Soares	Merge branch 'develop' into feature/JAL-244_Automatical...	blob \| commitdiff \| diff to current
2023-07-27	Ben Soares	JAL-244 Allow adjusting Id column width in wrap mode...	blob \| commitdiff \| diff to current
2023-07-25	Ben Soares	JAL-244 testing without AlignFrame for --wrap	blob \| commitdiff \| diff to current
2023-07-21	Ben Soares	JAL-244 Fixed idWidth labels in headless mode for non...	blob \| commitdiff \| diff to current
2023-07-20	Ben Soares	JAL-244 More accurate width calculation, allow increase...	blob \| commitdiff \| diff to current
2023-07-20	James Procter	JAL-3855 auto select clusters and fix up colouring...	blob \| commitdiff \| diff to current
2023-07-19	Ben Soares	JAL-244 Changes to Annotation labels width now adjusts...	blob \| commitdiff \| diff to current
2023-05-26	James Procter	JAL-4134 internationalise popup menu entries and show...	blob \| commitdiff \| diff to current
2023-05-26	James Procter	Merge branch 'develop' into features/JAL-4134_use_annot...	blob \| commitdiff \| diff to current
2023-05-26	James Procter	JAL-1556 initial implementation - no tests as yet but...	blob \| commitdiff \| diff to current
2023-05-25	James Procter	JAL-4134 popup menu and annotation row property to...	blob \| commitdiff \| diff to current
2023-05-25	Ben Soares	JAL-4186 Turn JvOptionPane Callable<Void> handlers...	blob \| commitdiff \| diff to current
2023-05-22	James Procter	JAL-4134 only build tree when showing it in the tree...	blob \| commitdiff \| diff to current
2023-05-22	James Procter	JAL-1551 spotless	blob \| commitdiff \| diff to current
2023-05-19	James Procter	JAL-1551 spotlessApply	blob \| commitdiff \| diff to current
2023-05-19	James Procter	JAL-1551 spotlessApply	blob \| commitdiff \| diff to current
2023-05-18	James Procter	JAL-4134 column grouping model and methods moved to...	blob \| commitdiff \| diff to current
2023-03-20	James Procter	JAL-4134 fix NPEs when matrix not resolved or alignment...	blob \| commitdiff \| diff to current
2023-03-20	James Procter	JAL-4134 better popup menu name ‘Tree for Contact Matrix’	blob \| commitdiff \| diff to current
2023-03-17	James Procter	JAL-4134 store/restore Newick tree for PAE annotation row	blob \| commitdiff \| diff to current
2023-03-15	James Procter	JAL-4091 JAL-4147 - revised annotation label display...	blob \| commitdiff \| diff to current
2023-02-27	James Procter	JAL-4134 display tree for columns - selecting an intern...	blob \| commitdiff \| diff to current
2023-02-03	James Procter	Merge branch 'develop' into features/r2_11_2_alphafold...	blob \| commitdiff \| diff to current
2022-10-30	Jim Procter	JAL-4091 lines to associate rows sharing same sequence...	blob \| commitdiff \| diff to current
2022-10-29	Jim Procter	JAL-4091 - noodling about including the names for seque...	blob \| commitdiff \| diff to current
2022-10-24	Ben Soares	JAL-1988 JAL-3772 Non-blocking modal dialogs for unsave...	blob \| commitdiff \| diff to current
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2021-09-21	Ben Soares	JAL-3691 automatic insertion of Locale.ROOT to toUpperC...	blob \| commitdiff \| diff to current
2020-03-30	gmungoc	Merge branch 'develop' into Jalview-JS/develop	blob \| commitdiff \| diff to current
2019-08-19	gmungoc	JAL-3412 calculateIdWidth - more consistency, constants...	blob \| commitdiff \| diff to current
2019-03-13	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2019-01-15	hansonr	removal of AlignmentFrame lines	blob \| commitdiff \| diff to current
2018-12-18	gmungoc	JAL-3048 DialogRunnerI reduced to minimal implementation	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-3132 status message for sequence and/or graph group...	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-3132 set status message when over sequence id or...	blob \| commitdiff \| diff to current
2018-10-02	gmungoc	JAL-3093 limited Consensus popup menu when in wrapped...	blob \| commitdiff \| diff to current
2018-10-01	gmungoc	JAL-3093 refactor (+test) Annotation Labels tooltip...	blob \| commitdiff \| diff to current
2018-07-09	gmungoc	JAL-3048 EditNameDialog modified for JalviewJS (layout...	blob \| commitdiff \| diff to current
2018-03-07	Jim Procter	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-02-27	Jim Procter	Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104	blob \| commitdiff \| diff to current
2018-02-22	Jim Procter	JAL-984 remove all references to idwidth.gif and use...	blob \| commitdiff \| diff to current
2018-02-22	Jim Procter	JAL-984 remove commented/unnecessary if clause	blob \| commitdiff \| diff to current
2018-02-02	gmungoc	JAL-984 merged to spikes-mungo	blob \| commitdiff \| diff to current
2018-02-02	gmungoc	Merge branch 'feature/JAL-984splitAdjuster' into featur...	blob \| commitdiff \| diff to current
2018-02-02	gmungoc	JAL-984 use cursor for drag regions to adjust annotatio...	blob \| commitdiff \| diff to current
2018-02-02	gmungoc	JAL-984 better behaved panel height adjuster	blob \| commitdiff \| diff to current
2018-01-19	kiramt	JAL-2759 Changes to getVisibleSequenceStrings after...	blob \| commitdiff \| diff to current
2018-01-10	gmungoc	JAL-1793 update spike branch to latest	blob \| commitdiff \| diff to current
2017-12-08	gmungoc	JAL-2843 refactor / tidy for feature filter input/output	blob \| commitdiff \| diff to current
2017-11-08	kiramt	Merge branch 'develop' into feature/JAL-2759	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-09-26	kiramt	JAL-2674 more List<int[]> -> HiddenColumns copy changes	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-08	kiramt	JAL-2591 Refactor HiddenColumns to use ArrayList instea...	blob \| commitdiff \| diff to current
2017-06-07	kiramt	JAL-2591 More refactoring (incomplete)	blob \| commitdiff \| diff to current
2017-06-07	kiramt	JAL-2591 simplifying hidden columns usage	blob \| commitdiff \| diff to current
2017-04-25	kiramt	JAL-2388 Working hidden regions hide/show in desktop	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Hidden cols separated from column selection...	blob \| commitdiff \| diff to current
2017-03-15	gmungoc	JAL-2431 show cDNA consensus after New View in split...	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-09-21	Jim Procter	JAL-2215 fix - trigger alignment update when ‘ignore...	blob \| commitdiff \| diff to current
2016-09-19	gmungoc	JAL-2118 reorder annotations after add/delete/hide...	blob \| commitdiff \| diff to current
2016-08-31	gmungoc	JAL-2077 test isPopupTrigger in mouseReleased or mouseC...	blob \| commitdiff \| diff to current
2016-08-30	gmungoc	Merge branch 'develop' into features/filetypeEnum	blob \| commitdiff \| diff to current
2016-07-18	gmungoc	fileFormat enum wip changes	blob \| commitdiff \| diff to current
2016-06-20	Jim Procter	Merge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker	blob \| commitdiff \| diff to current
2016-05-30	Jim Procter	JAL-553 JAL-1557 always send selections after triggerin...	blob \| commitdiff \| diff to current
2016-05-30	Jim Procter	JAL-1557 allow group associated rows to be used to...	blob \| commitdiff \| diff to current
2016-05-30	Jim Procter	JAL-2077 fix: convenience method and checks for CMD...	blob \| commitdiff \| diff to current
2016-04-26	Jim Procter	JAL-2077 reinstate annotation label popup by handling...	blob \| commitdiff \| diff to current
2016-04-26	gmungoc	JAL-2068 deleting user-defined annotation removes the...	blob \| commitdiff \| diff to current
2016-04-24	Jim Procter	JAL-2077 - reinstate popups on osx	blob \| commitdiff \| diff to current
2016-04-11	tcofoegbu	JAL-2054 Renamed getStartEnd in AlignFrame to getVisibl...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-08-10	tcofoegbu	JAL-1486 fixed flatfile output of visible region for...	blob \| commitdiff \| diff to current
2015-06-09	tcofoegbu	JAL-1488 bug-fix for incorrect start/end position in...	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	JAL-1683 replace year/version strings with tokens in...	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...	blob \| commitdiff \| diff to current
2015-01-23	Jim Procter	JAL-1551 JAL-962 formatting and code change ripples...	blob \| commitdiff \| diff to current
2015-01-23	Jim Procter	JAL-1628 drop getShowAnnotation accessor in favour...	blob \| commitdiff \| diff to current
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