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Check hiddenSequence before placing in tmp
[jalview.git]
/
src
/
jalview
/
gui
/
Jalview2XML.java
2006-10-18
amwaterhouse
showqual, showcons never used
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commitdiff
2006-10-06
amwaterhouse
AAFrequency optimized
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diff to current
2006-10-05
amwaterhouse
Multiple Views
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2006-09-12
amwaterhouse
hideSequence hide all before recalc consensus
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2006-08-30
amwaterhouse
User colours are case sensitive
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2006-08-29
amwaterhouse
createMapping alreadyMapped
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2006-08-22
jprocter
off by one bug in hiden column unmarshalling
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2006-08-21
amwaterhouse
header updated
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2006-08-17
amwaterhouse
OptionPanes invokeLater
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2006-08-14
amwaterhouse
Stop loading must be before JOptionPane, 1.5 bug
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2006-08-09
amwaterhouse
Must save all the feature settings
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2006-08-09
amwaterhouse
Save links and scores and keyValues for features
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2006-08-07
amwaterhouse
Set wrapped mode even if false
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2006-07-27
amwaterhouse
Dont set pdb file if it doenst exist
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2006-07-27
amwaterhouse
Readline instead of bit by bit
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2006-07-26
amwaterhouse
Load and save PDB files
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2006-07-21
amwaterhouse
Saves hidden seqs and DBRefs
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2006-07-12
amwaterhouse
sequences are private in SequenceGroup
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2006-06-14
amwaterhouse
Status is now in otherData of feature
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2006-05-17
amwaterhouse
Restrict annotation panel to 50% window on load
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2006-05-16
amwaterhouse
Save annotation colours, hideConsevation etc, graphGroups
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2006-05-11
amwaterhouse
Typo
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2006-05-10
amwaterhouse
saves and loads annotations with seqrefs
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2006-04-05
amwaterhouse
Maintain feature order
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2006-04-05
amwaterhouse
Save annotationColours
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2006-04-05
amwaterhouse
Turn off validation for speed
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2006-04-04
amwaterhouse
For archive only
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2006-03-24
amwaterhouse
FeatureSettings bug fixed
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2006-02-24
amwaterhouse
Features now an array
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2006-02-16
amwaterhouse
Save featureGroup
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2006-02-15
amwaterhouse
Saves and loads sequence description
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2006-02-03
amwaterhouse
Save and load graph type
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2005-12-22
amwaterhouse
Annotations.Graph can be bargraph, linegraph
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2005-12-08
amwaterhouse
showAnnotation state loaded
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2005-12-06
amwaterhouse
After merge
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2005-09-20
amwaterhouse
New methods in treePanel
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2005-09-14
amwaterhouse
Call methods in treeCanvas on init
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2005-09-14
amwaterhouse
Use getTreeFont instead of getFont
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2005-09-14
amwaterhouse
Save fonts for trees
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2005-08-24
amwaterhouse
Bring trees to front
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2005-08-23
amwaterhouse
Set size and location of frame before visible
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2005-08-22
amwaterhouse
Checks for null colour in groups
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2005-08-22
amwaterhouse
Conservation colour scheme is no more
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2005-08-17
amwaterhouse
Conservation group colour saved
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2005-08-17
amwaterhouse
No score colour scheme, group colours saved if conserva...
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2005-08-15
amwaterhouse
IgnoreGapsConsensus
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2005-08-03
amwaterhouse
Trees aren't save in headless state in this version
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2005-08-02
amwaterhouse
Use font.getName, not font.getFontName
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2005-07-11
amwaterhouse
Release and build date methods changed
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-15
amwaterhouse
REmove commented out lines
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2005-06-14
amwaterhouse
add version
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2005-06-14
amwaterhouse
Load/Save trees
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2005-06-13
amwaterhouse
Updates checkboxes on load
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2005-06-10
amwaterhouse
SeqFetcher modified
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2005-06-08
amwaterhouse
Recalc accelerated
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2005-06-08
amwaterhouse
Sets sequence features
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-06-02
amwaterhouse
Reverse order for windows, readin from url
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2005-05-25
amwaterhouse
saves usercolours
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2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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2005-05-23
amwaterhouse
new savestate method
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2005-05-19
amwaterhouse
new class
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diff to current