Format changes
[jalview.git] / src / jalview / gui / Jalview2XML.java
2006-11-28 amwaterhouseREmove system.out
2006-11-28 amwaterhouseLoads PDB files from jar file, new views can open PDB...
2006-11-21 amwaterhouseexpanded views, j2xml use setinitialtabvisible, close...
2006-11-15 amwaterhouseright align ids
2006-11-13 amwaterhouseSave text colours
2006-11-09 amwaterhouseclose menu item true
2006-11-07 amwaterhouseDont load trees if copying Viewport
2006-11-03 amwaterhouseUse Jalview2XML to copy AlignmentPanel
2006-11-02 amwaterhouseSet menu state in alignFrame
2006-10-26 amwaterhouseshowConservation, quality, identity not used
2006-10-18 amwaterhouseshowqual, showcons never used
2006-10-06 amwaterhouseAAFrequency optimized
2006-10-05 amwaterhouseMultiple Views
2006-09-12 amwaterhousehideSequence hide all before recalc consensus
2006-08-30 amwaterhouseUser colours are case sensitive
2006-08-29 amwaterhousecreateMapping alreadyMapped
2006-08-22 jprocteroff by one bug in hiden column unmarshalling
2006-08-21 amwaterhouseheader updated
2006-08-17 amwaterhouseOptionPanes invokeLater
2006-08-14 amwaterhouseStop loading must be before JOptionPane, 1.5 bug
2006-08-09 amwaterhouseMust save all the feature settings
2006-08-09 amwaterhouseSave links and scores and keyValues for features
2006-08-07 amwaterhouseSet wrapped mode even if false
2006-07-27 amwaterhouseDont set pdb file if it doenst exist
2006-07-27 amwaterhouseReadline instead of bit by bit
2006-07-26 amwaterhouseLoad and save PDB files
2006-07-21 amwaterhouseSaves hidden seqs and DBRefs
2006-07-12 amwaterhousesequences are private in SequenceGroup
2006-06-14 amwaterhouseStatus is now in otherData of feature
2006-05-17 amwaterhouseRestrict annotation panel to 50% window on load
2006-05-16 amwaterhouseSave annotation colours, hideConsevation etc, graphGroups
2006-05-11 amwaterhouseTypo
2006-05-10 amwaterhousesaves and loads annotations with seqrefs
2006-04-05 amwaterhouseMaintain feature order
2006-04-05 amwaterhouseSave annotationColours
2006-04-05 amwaterhouseTurn off validation for speed
2006-04-04 amwaterhouseFor archive only
2006-03-24 amwaterhouseFeatureSettings bug fixed
2006-02-24 amwaterhouseFeatures now an array
2006-02-16 amwaterhouseSave featureGroup
2006-02-15 amwaterhouseSaves and loads sequence description
2006-02-03 amwaterhouseSave and load graph type
2005-12-22 amwaterhouseAnnotations.Graph can be bargraph, linegraph
2005-12-08 amwaterhouseshowAnnotation state loaded
2005-12-06 amwaterhouseAfter merge
2005-09-20 amwaterhouseNew methods in treePanel
2005-09-14 amwaterhouseCall methods in treeCanvas on init
2005-09-14 amwaterhouseUse getTreeFont instead of getFont
2005-09-14 amwaterhouseSave fonts for trees
2005-08-24 amwaterhouseBring trees to front
2005-08-23 amwaterhouseSet size and location of frame before visible
2005-08-22 amwaterhouseChecks for null colour in groups
2005-08-22 amwaterhouseConservation colour scheme is no more
2005-08-17 amwaterhouseConservation group colour saved
2005-08-17 amwaterhouseNo score colour scheme, group colours saved if conserva...
2005-08-15 amwaterhouseIgnoreGapsConsensus
2005-08-03 amwaterhouseTrees aren't save in headless state in this version
2005-08-02 amwaterhouseUse font.getName, not font.getFontName
2005-07-11 amwaterhouseRelease and build date methods changed
2005-06-30 amwaterhouseFormatting changes
2005-06-15 amwaterhouseREmove commented out lines
2005-06-14 amwaterhouseadd version
2005-06-14 amwaterhouseLoad/Save trees
2005-06-13 amwaterhouseUpdates checkboxes on load
2005-06-10 amwaterhouseSeqFetcher modified
2005-06-08 amwaterhouseRecalc accelerated
2005-06-08 amwaterhouseSets sequence features
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-06-02 amwaterhouseReverse order for windows, readin from url
2005-05-25 amwaterhousesaves usercolours
2005-05-25 jproctertidied up system.out messages and moved many to stderr.
2005-05-23 amwaterhousenew savestate method
2005-05-19 amwaterhousenew class