JAL-3851 remove old interface
[jalview.git] / src / jalview / gui / Preferences.java
2020-11-13 Ben SoaresJAL-3775 Eclipse re-formatting commit
2020-11-13 Ben SoaresJAL-3633 Apply (proxy) button enabled when needed
2020-11-13 Ben SoaresJAL-3633 Small changes to allow future fitting with...
2020-11-13 Ben SoaresJAL-3275 JAL-3633: JAL-3275 Turned Preferences into...
2020-11-13 Ben SoaresJAL-3633 Set proxy preferences before web calls in...
2020-11-13 Ben SoaresJAL-3633 Memory only proxy auth password storage. Open...
2020-11-12 Ben SoaresJAL-3633 Added Proxy Authentication credentials in...
2020-11-12 Ben SoaresJAL-3633 Remember system set proxy properties. Add...
2020-05-24 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous...
2020-05-19 gmungocMerge branch 'develop' into feature/JAL-3551Pymol
2020-05-11 gmungocJAL-2422 JAL-3551 viewer text/variables generalised...
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop
2020-03-13 gmungocJAL-3551 working proof of concept of Jalview driving...
2020-03-09 gmungocMerge branch 'develop' into feature/JAL-2422ChimeraX
2020-03-02 Jim ProcterJAL-3407 redact Java 8 incompatible '<>' with anonymous...
2020-02-19 Jim ProcterJAL-3538 anti-aliasing enabled by default
2020-01-31 gmungocJAL-2422 more responsive Chimera/X path prompts in...
2020-01-28 gmungocJAL-2422 ChimeraX added to Preferences
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge
2019-05-27 Ben SoaresJAL-3141 Added HashMap types for Java 1.8 compatibility
2019-05-24 Ben SoaresJAL-3141 Reworked a lot of BackupFiles to allow the...
2019-04-03 hansonrreplacing @j2sNative with @j2sIgnore where appropriate...
2019-03-27 hansonrisJS cleanup
2019-03-15 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-03-15 gmungocJAL-3203 Overview show hidden default false also in...
2019-03-13 gmungocMerge branch 'develop' into trialMerge
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
2019-01-24 Ben SoaresJAL-3141 New layout and wording of Backups Preferences...
2019-01-23 Ben SoaresJAL-3141 Added Presets options in the Backups Preferenc...
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
2019-01-20 Ben SoaresJAL-3141 Fixed example filenames in Preferences pane...
2019-01-20 Ben SoaresJAL-3141 Changed suffix position to after the extension...
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review
2018-11-05 Ben SoaresJAL-3141 couple of minor fixes for example files being...
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing...
2018-11-01 Ben SoaresJAL-3141 Preferences 'Backups' tab now fits. Moved...
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn...
2018-08-20 gmungocJAL-3084 force EPS output to "Text" for JalviewJS
2018-08-20 gmungocJAL-3084 hide startup file, Chimera, HTML/SVG, Web...
2018-07-17 gmungocJAL-3068 LineartOptions for EPS/HTML/SVG, new preferenc... task/JAL-3068lineartDialog
2018-07-10 gmungocJAL-3048 code reordered for JalviewJS compliance
2018-07-05 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source...
2018-07-05 hansonrJAL-3026 fixes MigLayout, JSON parser
2018-07-05 gmungocJAL-3058 refactored raising JColorChooser for JS compat...
2018-06-28 Jim ProcterJAL-3048 TODOs for refactoring JalviewFileChooser pattern
2018-06-27 hansonrJAL-3032 just the changes pulled already
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
2018-03-13 gmungocJAL-2913 use FIGURE_FIXEDIDWIDTH (not FIGURE_USERIDWIDTH)
2018-01-10 gmungocJAL-1793 update spike branch to latest
2017-11-30 Jim ProcterJAL-2849 JAL-2863 file format preferences TODO

2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-09-04 Jim ProcterJAL-2527 move default colours for applet / application...
2017-08-31 kiramtJAL-2527 Updates following code review
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first...
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up...
2017-08-28 kiramtJAL-2527 Started adding overview preferences
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy
2017-02-08 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-01-27 kiramtJAL-2366 Removed unneeded setEnabled calls
2017-01-26 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche...
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI...
2016-12-20 gmungocJAL-2360 ColourSchemes holds configured schemes, AlignF...
2016-12-16 kiramtJAL-2316 Added database name column to URL links table...
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum,
2016-12-15 kiramtJAL-2316 Changes following review.
2016-12-13 kiramtMerge branch 'develop' into features/JAL-2316
2016-12-12 kiramtJAL-2316 Added GUI checks for duplicate link ids
2016-12-12 kiramtJAL-2316 Unit test update to UrlLinkTableModel and...
2016-12-12 kiramtJAL-2316 Added jalview.urls.* packages
2016-12-09 kiramtJAL-2316 Unit test updates and associated minor changes...
2016-12-07 gmungocJAL-2344 handle null format, simplify JalviewFileChoose...
2016-12-07 kiramtJAL-2316 Restructure identifiers.org download
2016-12-05 kiramtJAL-2316 Added UrlProvider factories. Tidied up labelling.
2016-12-05 kiramtJAL-2316 Adjusted unit tests. Tidied UrlLinkProviderI...
2016-12-02 kiramtJAL-2316 GUI updates to Connections tab in Preferences...
2016-11-28 gmungocMerge branch 'develop' into trialMerge
2016-11-25 gmungocMerge branch 'develop' into trialMerge
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane
2016-11-24 gmungocFurther tweaks to get tests passing
2016-11-15 kiramtJAL-2316 Moved url providers into own package
2016-11-15 kiramtJAL-2316 Refactoring of functionality to provide urls...
2016-11-14 kiramtUrl links changes - incomplete checkin as battery low
2016-11-04 kiramtJAL-2315 Clear sequenceURLLinks if all sequence links...
2016-11-02 kiramtJAL-2282 Renamed internal use of sequence id / db acces...
2016-10-31 kiramtUse ACCESSION_ID for database accession id, and SEQUENC...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-24 kiramtCorrect Preferences to check for SEQUENCE_NAME as well...
2016-10-22 kiramtWorking links menu
2016-10-21 kiramtFactored URL Link constants out into UrlConstants file.
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum
2016-07-12 gmungocFileFormat enum wip changes
2016-07-11 gmungocfile format enum wip changes
2016-05-27 gmungocJAL-1911 use existing object when setting 'Prompt each...
2016-05-27 tcofoegbuJAL-1911 further improvement to bugfix - do not save...
2016-05-26 tcofoegbuJAL-1911 improvement to bugfix - do not save i18n text...
next