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[jalview.git] / src / jalview / gui / SeqPanel.java

2019-03-23	gmungoc	JAL-1889 remove debug logging, add updateLayout()	blob \| commitdiff
2019-03-22	gmungoc	JAL-1889 more debug logging	blob \| commitdiff \| diff to current
2019-03-21	gmungoc	JAL-1889 better debug logging	blob \| commitdiff \| diff to current
2019-03-21	gmungoc	JAL-1889 temporary debug in findColumn()	blob \| commitdiff \| diff to current
2019-03-20	gmungoc	JAL-3093 fine tuning of SeqPanel tooltip	blob \| commitdiff
2019-03-04	gmungoc	Merge branch 'bug/JAL-3072scrollThread' into merge...	blob \| commitdiff \| diff to current
2019-03-01	gmungoc	Merge branch 'feature/JAL-3093wrappedModeTooltips'...	blob \| commitdiff \| diff to current
2019-03-01	gmungoc	Merge branch 'feature/JAL-1244stretchStatusMsg' into...	blob \| commitdiff \| diff to current
2019-03-01	gmungoc	Merge branch 'bug/JAL-3164complementOverview' into...	blob \| commitdiff \| diff to current
2019-02-26	gmungoc	JAL-3201 group colour schemes distinct instances	blob \| commitdiff \| diff to current
2019-02-22	gmungoc	JAL-2915 don't recalculate Overview on scroll to positi...	blob \| commitdiff \| diff to current
2018-11-28	gmungoc	JAL-3164 redraw complement overview on hide columns bug/JAL-3164complementOverview	blob \| commitdiff \| diff to current
2018-10-08	gmungoc	JAL-1244 comments, javadoc, method signature tweaks feature/JAL-1244stretchStatusMsg	blob \| commitdiff \| diff to current
2018-10-08	gmungoc	JAL-1244 editSequence extract method refactoring	blob \| commitdiff \| diff to current
2018-10-05	gmungoc	JAL-1244 improved status message for insert/delete gap	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-1244 no status message (yet) for locked edit of...	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-1244 status message for insert/delete gaps on singl...	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-1244 status message while dragging a stretch group	blob \| commitdiff \| diff to current
2018-10-04	gmungoc	JAL-3093 unit tests, no mouse action over left/right...	blob \| commitdiff \| diff to current
2018-10-03	gmungoc	JAL-3093 tweaks to code and test for 3px gap above...	blob \| commitdiff \| diff to current
2018-10-02	gmungoc	JAL-3093 unit tests for SeqPanel.findMousePosition	blob \| commitdiff \| diff to current
2018-10-02	gmungoc	JAL-3093 added MousePos.isOverAnnotation() for extra...	blob \| commitdiff \| diff to current
2018-10-01	gmungoc	JAL-3093 'read-only' annotations when in wrapped mode	blob \| commitdiff \| diff to current
2018-10-01	gmungoc	JAL-3093 show annotation tooltips and status message...	blob \| commitdiff \| diff to current
2018-07-25	gmungoc	JAL-3074 don't scroll up/down on drag out of scale...	blob \| commitdiff \| diff to current
2018-07-25	gmungoc	JAL-3072 SeqPanel.stopScrolling on mouse up in scale...	blob \| commitdiff \| diff to current
2018-05-07	gmungoc	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-04-05	Jim Procter	JAL-2945 provide access to last highlighted results	blob \| commitdiff \| diff to current
2018-03-08	gmungoc	Merge remote-tracking branch 'origin/releases/Release_2... merges/JAL-2906_update2_11_from_2_10_4	blob \| commitdiff \| diff to current
2018-03-08	gmungoc	JAL-2930 use MouseWheelEvent.getPreciseWheelRotation...	blob \| commitdiff \| diff to current
2018-03-07	Jim Procter	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-02-06	kiramt	Merge branch 'develop' into feature/JAL-2759 feature/JAL-2759	blob \| commitdiff \| diff to current
2018-01-19	kiramt	JAL-2759 Changes to getVisibleSequenceStrings after...	blob \| commitdiff \| diff to current
2018-01-15	kiramt	JAL-2759 Rename findColumnPosition and adjustForHiddenC...	blob \| commitdiff \| diff to current
2018-01-10	gmungoc	JAL-1793 update spike branch to latest	blob \| commitdiff \| diff to current
2017-12-05	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	blob \| commitdiff \| diff to current
2017-11-28	Jim Procter	Merge branch 'bug/JAL-2842' into develop	blob \| commitdiff \| diff to current
2017-11-22	kiramt	JAL-2842 JAL-2759 change to SeqPanel moveCursor	blob \| commitdiff \| diff to current
2017-11-22	gmungoc	JAL-2069 spike updated with latest (FeatureTypeSettings)	blob \| commitdiff \| diff to current
2017-11-22	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	blob \| commitdiff \| diff to current
2017-11-17	kiramt	Merge branch 'develop' into bug/JAL-2837 bug/JAL-2837	blob \| commitdiff \| diff to current
2017-11-16	kiramt	JAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831	blob \| commitdiff \| diff to current
2017-11-16	kiramt	JAL-2842 remove infinite loop in cursor move bug/JAL-2842	blob \| commitdiff \| diff to current
2017-11-15	kiramt	JAL-2831 Don't show cursor if position in hidden region	blob \| commitdiff \| diff to current
2017-11-15	kiramt	JAL-2840 fix wrapped scrolling when using cursor at...	blob \| commitdiff \| diff to current
2017-11-14	kiramt	JAL-2831 Added move viewport event and set up cursor...	blob \| commitdiff \| diff to current
2017-11-07	gmungoc	JAL-2069 update spike branch with latest	blob \| commitdiff \| diff to current
2017-11-07	gmungoc	JAL-2820 limit length of residue tooltip	blob \| commitdiff \| diff to current
2017-11-06	gmungoc	JAL-2820 include attribute value used for feature colou...	blob \| commitdiff \| diff to current
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	blob \| commitdiff \| diff to current
2017-10-26	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	blob \| commitdiff \| diff to current
2017-10-25	Jim Procter	Merge branch 'bug/JAL-2667mouseWheelWrapped' into develop	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	Merge branch 'develop' into features/JAL-1793VCF; lambd...	blob \| commitdiff \| diff to current
2017-10-19	kiramt	Merge branch 'develop' into bug/JAL-2609attemptedmerge	blob \| commitdiff \| diff to current
2017-10-17	Jim Procter	JAL-2773 renamed flags for clarity	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-10-11	gmungoc	JAL-2609 tidy label width code, some checkstyle warnings	blob \| commitdiff \| diff to current
2017-10-10	kiramt	Merge remote-tracking branch 'origin/features/JAL-2609f...	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-09-28	gmungoc	JAL-2744 refactor PopupMenu constructor to enable addin...	blob \| commitdiff \| diff to current
2017-09-05	Jim Procter	Merge branch 'master' into portforward/JAL-2675_2102b1t...	blob \| commitdiff \| diff to current
2017-09-04	kiramt	JAL-2673 turn off update to running flag from scrollUp... bug/JAL-2673	blob \| commitdiff \| diff to current
2017-09-04	kiramt	JAL-2673 Attempt to stop infinite scrolling etc	blob \| commitdiff \| diff to current
2017-08-28	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-08-28	kiramt	Merge remote-tracking branch 'origin/releases/Release_2...	blob \| commitdiff \| diff to current
2017-08-28	kiramt	JAL-2665 Changes for review comments; printing with... bug/JAL-2665	blob \| commitdiff \| diff to current
2017-08-23	gmungoc	JAL-2667 tests added, update status bar and tooltip	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2609fastPaintW...	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-08-17	kiramt	JAL-2665 partial fix for selection running over 2 wrapp...	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-08-16	kiramt	JAL-2665 Added sequence group update event.	blob \| commitdiff \| diff to current
2017-08-15	kiramt	JAL-2265 turn off NPE	blob \| commitdiff \| diff to current
2017-07-28	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-07-28	gmungoc	JAL-147 corrected status bar message for wrapped scroll...	blob \| commitdiff \| diff to current
2017-07-28	gmungoc	JAL-2609 first try	blob \| commitdiff \| diff to current
2017-07-28	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-07-28	gmungoc	JAL-2622 no vertical scroll of wrapped alignment from...	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-07-19	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-07-06	gmungoc	JAL-1858 fast paint wrapped highlights unless view...	blob \| commitdiff \| diff to current
2017-06-29	gmungoc	JAL-147 improved wrapped scrolling (including Overview...	blob \| commitdiff \| diff to current
2017-06-29	gmungoc	JAL-2605 exclude left/right scale in sequence column...	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	JAL-1858 repaint after Amend Features dialog	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	JAL-1858 highlights on wrapped panel - work in progress	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-08	gmungoc	JAL-2526 setStatusMessage avoid redundant findPosition...	blob \| commitdiff \| diff to current
2017-06-06	kiramt	JAL-2591 Removed getHiddenRegions()==null checks which...	blob \| commitdiff \| diff to current
2017-06-02	gmungoc	Merge branch 'features/JAL-2446NCList' into features...	blob \| commitdiff \| diff to current
2017-06-01	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-06-01	gmungoc	JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn	blob \| commitdiff \| diff to current
2017-05-31	Jim Procter	Merge branch 'JAL-2571' into develop	blob \| commitdiff \| diff to current
2017-05-31	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-05-31	gmungoc	JAL-2547 handle contact features 'around' a gap correctly	blob \| commitdiff \| diff to current
2017-05-30	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-05-30	gmungoc	JAL-2547 tooltip/AmendFeatures on gap straddled by...	blob \| commitdiff \| diff to current
2017-05-30	kiramt	JAL-2571 Corrected alignment width/height checks to...	blob \| commitdiff \| diff to current
2017-05-30	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
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