JAL-2069 spike updated with latest (FeatureTypeSettings)
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Wed, 22 Nov 2017 15:36:06 +0000 (15:36 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Wed, 22 Nov 2017 15:36:06 +0000 (15:36 +0000)
commit9e926ac4305fd9dff38b6e079e55b4f50664d544
tree5f7870ff2ae807df94e11b04191c7aa178f1ee57
parentf8b17a9e7363b8a9e7cd12d61bc6d611c7c97d7d
JAL-2069 spike updated with latest (FeatureTypeSettings)
62 files changed:
help/helpTOC.xml
help/html/calculations/sorting.html
help/html/features/viewingpdbs.html
help/html/releases.html
help/html/whatsNew.html
resources/lang/Messages.properties
resources/lang/Messages_es.properties
src/jalview/api/FeatureColourI.java
src/jalview/appletgui/AnnotationPanel.java
src/jalview/appletgui/FeatureColourChooser.java
src/jalview/appletgui/FeatureSettings.java
src/jalview/appletgui/IdCanvas.java
src/jalview/appletgui/ScalePanel.java
src/jalview/appletgui/SeqCanvas.java
src/jalview/appletgui/SeqPanel.java
src/jalview/datamodel/Alignment.java
src/jalview/datamodel/AlignmentAnnotation.java
src/jalview/datamodel/ContiguousI.java
src/jalview/datamodel/Range.java
src/jalview/datamodel/Sequence.java
src/jalview/datamodel/SequenceCursor.java
src/jalview/datamodel/SequenceGroup.java
src/jalview/datamodel/SequenceI.java
src/jalview/datamodel/features/FeatureAttributes.java
src/jalview/datamodel/features/FeatureLocationI.java
src/jalview/datamodel/features/FeatureStore.java
src/jalview/datamodel/features/NCList.java
src/jalview/datamodel/features/NCNode.java
src/jalview/datamodel/features/RangeComparator.java
src/jalview/datamodel/features/SequenceFeatures.java
src/jalview/datamodel/features/SequenceFeaturesI.java
src/jalview/datamodel/xdb/uniprot/UniprotFeature.java
src/jalview/gui/AnnotationPanel.java
src/jalview/gui/CalculationChooser.java
src/jalview/gui/FeatureColourChooser.java [deleted file]
src/jalview/gui/FeatureRenderer.java
src/jalview/gui/FeatureSettings.java
src/jalview/gui/FeatureTypeSettings.java [new file with mode: 0644]
src/jalview/gui/IdCanvas.java
src/jalview/gui/JalviewDialog.java
src/jalview/gui/JvSwingUtils.java
src/jalview/gui/ScalePanel.java
src/jalview/gui/SeqCanvas.java
src/jalview/gui/SeqPanel.java
src/jalview/gui/SequenceRenderer.java
src/jalview/gui/StructureChooser.java
src/jalview/schemes/FeatureColour.java
src/jalview/util/IntRangeComparator.java
src/jalview/viewmodel/OverviewDimensionsHideHidden.java
src/jalview/viewmodel/OverviewDimensionsShowHidden.java
src/jalview/viewmodel/ViewportRanges.java
src/jalview/viewmodel/seqfeatures/FeatureRendererModel.java
src/jalview/ws/dbsources/Uniprot.java
test/jalview/datamodel/SequenceTest.java
test/jalview/datamodel/features/FeatureAttributesTest.java
test/jalview/io/vcf/VCFLoaderTest.java
test/jalview/renderer/seqfeatures/FeatureRendererTest.java
test/jalview/schemes/FeatureColourTest.java
test/jalview/viewmodel/ViewportRangesTest.java
test/jalview/ws/dbsources/UniprotTest.java
utils/InstallAnywhere/Jalview.iap_xml
utils/MessageBundleChecker.java