2005-12-08 |
amwaterhouse | Dont repaint if component has been removed |
tree | commitdiff |
2005-12-08 |
amwaterhouse | showAnnotation state loaded |
tree | commitdiff |
2005-12-08 |
amwaterhouse | null pointer in wrapped mode, click near sequence |
tree | commitdiff |
2005-12-07 |
amwaterhouse | License added to new files |
tree | commitdiff |
2005-12-06 |
amwaterhouse | Slightly larger |
tree | commitdiff |
2005-12-06 |
amwaterhouse | Allow for DNA alignments in imgMap |
tree | commitdiff |
2005-12-06 |
amwaterhouse | Make ImageMap for features as well as groups |
tree | commitdiff |
2005-12-06 |
amwaterhouse | Add features to dataset |
tree | commitdiff |
2005-12-06 |
amwaterhouse | Add internalFrameActivated listener |
tree | commitdiff |
2005-12-06 |
amwaterhouse | After merge |
tree | commitdiff |
2005-11-18 |
jprocter | Fixed bug dragonfly.compbio.dundee.ac.uk/mantis/view... |
tree | commitdiff |
2005-10-07 |
amwaterhouse | getalignment method added |
tree | commitdiff |
2005-10-07 |
amwaterhouse | Select all cutandpaste |
tree | commitdiff |
2005-10-03 |
amwaterhouse | Remove float width |
tree | commitdiff |
2005-10-03 |
amwaterhouse | Request focus for new frames |
tree | commitdiff |
2005-10-03 |
amwaterhouse | Return if no searchString |
tree | commitdiff |
2005-10-03 |
amwaterhouse | Keylistener added to internalFrame |
tree | commitdiff |
2005-10-03 |
amwaterhouse | Remove development code |
tree | commitdiff |
2005-09-30 |
amwaterhouse | Remove redundancy in Eclipse |
tree | commitdiff |
2005-09-29 |
amwaterhouse | Take into account scroll value |
tree | commitdiff |
2005-09-27 |
amwaterhouse | Show labels in wrapped view |
tree | commitdiff |
2005-09-23 |
amwaterhouse | Draw labels, anti alias |
tree | commitdiff |
2005-09-23 |
amwaterhouse | Right click copy/paste popup |
tree | commitdiff |
2005-09-23 |
amwaterhouse | Now an InternalFrame with menus |
tree | commitdiff |
2005-09-22 |
amwaterhouse | SetAnnotationVisible - ignore if wrapped |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Dont calculate conservation for nucleotides |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Create instance of FormatAdapter |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Display nucleotides |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Break if regex not found |
tree | commitdiff |
2005-09-22 |
amwaterhouse | If Mac user hasnt selected file format, give warning |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Wrap alignment with annotations |
tree | commitdiff |
2005-09-21 |
amwaterhouse | Jalview |
tree | commitdiff |
2005-09-21 |
amwaterhouse | Sequences must be aligned before PCA |
tree | commitdiff |
2005-09-21 |
amwaterhouse | Next active Frame losing focus bug fixed |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Checks end of sequence before drawing text |
tree | commitdiff |
2005-09-20 |
amwaterhouse | PCAPanel just requires viewport |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Help gets bounds from help map file |
tree | commitdiff |
2005-09-20 |
amwaterhouse | New methods in treePanel |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Null pointer if user presses shift before anything... |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Align labels format left |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Optimise graphics copy object |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Use selectionGroup to find chosen sequences |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Make sure fontmetrics is not null |
tree | commitdiff |
2005-09-19 |
amwaterhouse | Make sure fontmetrics exists for headless state |
tree | commitdiff |
2005-09-19 |
amwaterhouse | Dont add ServiceListeners if desktop is null |
tree | commitdiff |
2005-09-19 |
amwaterhouse | Alignment of node labels modified |
tree | commitdiff |
2005-09-19 |
amwaterhouse | ShowDistances, placeHolders and bootstraps have their... |
tree | commitdiff |
2005-09-16 |
amwaterhouse | Check image is not null in fast paint |
tree | commitdiff |
2005-09-16 |
amwaterhouse | Set distanceMenu selected true |
tree | commitdiff |
2005-09-15 |
amwaterhouse | OptionPane warning for out of memory |
tree | commitdiff |
2005-09-15 |
amwaterhouse | remove system.out |
tree | commitdiff |
2005-09-15 |
amwaterhouse | Remove key listener |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Move bootStrap/distance settings outside thread |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Add end of consensus test for wrapped edit |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Make new frame selected |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Copy and paste uses FASTA format |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Call methods in treeCanvas on init |
tree | commitdiff |
2005-09-14 |
amwaterhouse | offy changes |
tree | commitdiff |
2005-09-14 |
amwaterhouse | OutOfMemory try catch |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Use font size, not font height |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Use getTreeFont instead of getFont |
tree | commitdiff |
2005-09-14 |
amwaterhouse | use fontchooser to change fonts |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Center labels |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Save fonts for trees |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Change fonts in Treepanel |
tree | commitdiff |
2005-09-14 |
amwaterhouse | Add header |
tree | commitdiff |
2005-09-14 |
amwaterhouse | System.gc after outofmemory |
tree | commitdiff |
2005-09-14 |
amwaterhouse | PCA is in outofmemory try-catch |
tree | commitdiff |
2005-09-13 |
amwaterhouse | Dont respond to mouse movements if alignment wrapped |
tree | commitdiff |
2005-09-13 |
amwaterhouse | Give focus to textarea on startup |
tree | commitdiff |
2005-09-13 |
amwaterhouse | EPSOptions added |
tree | commitdiff |
2005-09-13 |
amwaterhouse | Warn if out of memory |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Remove gaps in regions, not char by char |
tree | commitdiff |
2005-09-12 |
amwaterhouse | null pointers removed |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Null pointers removed |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Dont fastpaint if movement is zero |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Update overview after change |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Update overview in alignmentChanged |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Size checking in drawGraph |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Overview subsamples alignment |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Move tree property change to treePanel |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Only 1 NJtree |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Init PCA in thread |
tree | commitdiff |
2005-09-08 |
amwaterhouse | If no consensus, disable certain colour options |
tree | commitdiff |
2005-09-08 |
amwaterhouse | update consensus and conservation are in try catch... |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Optimise switch to fastPaint |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Correct mouse pressed bug |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Optimised for wide alignments |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Load in a thread |
tree | commitdiff |
2005-09-01 |
amwaterhouse | firePropertyChange if sequences deleted |
tree | commitdiff |
2005-09-01 |
amwaterhouse | Use propertyListener for alignment edits |
tree | commitdiff |
2005-09-01 |
amwaterhouse | Sort by added to preferences |
tree | commitdiff |
2005-09-01 |
amwaterhouse | No need to recalculate image for font change |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Set user colours same as global |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Repaint annotations after edit |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Wrapped, getWidth > vconsensus |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Update colours after remove left, cut, paste |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Keep mouse drag to 1 block when wrapped |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Dont setSelected on new frames |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Out of bounds checks |
tree | commitdiff |
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