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JAL-3829 JAL-3865 test structure chooser queries to mocked 3D Beacons FTS
[jalview.git]
/
src
/
jalview
/
gui
/
2021-09-03
Jim Procter
JAL-3829 comments on the 3D structure chooser’s initial...
tree
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commitdiff
2021-09-03
Jim Procter
JAL-3865 isolate PDB and TDB clients and last query...
tree
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commitdiff
2021-09-03
Jim Procter
JAL-3829 JAL-3865 StructureChooserQuerySource implement...
tree
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commitdiff
2021-09-03
Jim Procter
JAL-3829 refactored FilterOption provider to the Struct...
tree
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commitdiff
2021-09-02
Jim Procter
Merge branch 'develop' into features/r2_11_2/JAL-3829_3...
tree
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commitdiff
2021-09-02
gmungoc
JAL-3509 JAL-1842 minor tidying of code
tree
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commitdiff
2021-09-02
gmungoc
JAL-3509 better placement of call to notifyFeaturesChan...
tree
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commitdiff
2021-09-02
gmungoc
JAL-3509 coerce RESNUM to hidden (really) after fetchin...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 generalised Alphafold retrieval mechanism...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 Structure chooser specific FTS interface and...
tree
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commitdiff
2021-08-30
Jim Procter
Merge branch 'feature/JAL-3855_ebi_alphafold_import...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 3d-beacons structure chooser logic (not yet...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 pulled out more of the FTS dependent parts...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 3d-beacons has a custom alignment retrieval...
tree
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commitdiff
2021-08-30
Jim Procter
JAL-3829 pushed the PDBFTSClient specific code to new...
tree
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commitdiff
2021-07-27
Jim Procter
JAL-3855 check if an alpha fold ID and retrieve using...
tree
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commitdiff
2021-04-06
Jim Procter
JAL-3832 dummy 3d-beacons database client and code...
tree
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commitdiff
2021-02-18
gmungoc
JAL-3822 pass panel height and width to wrapped geometr...
tree
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commitdiff
2021-02-18
gmungoc
JAL-2422 remove temporary patch (requires ChimeraX...
tree
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commitdiff
2021-02-10
Ben Soares
JAL-3251 On linux set (sun.awt.X11.XToolkit.)awtAppClas...
tree
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commitdiff
2021-02-04
gmungoc
JAL-2422 a fix and a fudge for two failing ChimeraX...
tree
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commitdiff
2021-01-21
gmungoc
JAL-3038 corrected code that reads editable JComboBox...
tree
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commitdiff
2020-12-11
Ben Soares
JAL-3594 Defintely want SplashScreen to appear in the...
tree
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commitdiff
2020-12-11
Ben Soares
JAL-3594 Adjustments to allow JalviewJS to use ChannelP...
tree
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commitdiff
2020-12-09
Ben Soares
JAL-3594 Images for splash screen
tree
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commitdiff
2020-12-09
Ben Soares
JAL-3594 JAL-3728 Added taskbar icons to desktop and...
tree
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commitdiff
2020-12-08
Ben Soares
Merge branch 'merge/develop_and_rebase_squashed_merge_J...
tree
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commitdiff
2020-12-08
Ben Soares
JAL-3594 Change main window title
tree
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commitdiff
2020-12-04
Ben Soares
JAL-3594 Added rotating logo png
tree
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commitdiff
2020-12-04
Ben Soares
JAL-3594 New jalview.util.ChannelProperties to get...
tree
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commitdiff
2020-12-01
Ben Soares
JAL-3609 JAL-3775 Tests for jalview.bin.HiDPISetting
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3775 Eclipse re-formatting commit
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Apply (proxy) button enabled when needed
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Small changes to allow future fitting with...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3275 JAL-3633: JAL-3275 Turned Preferences into...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Set proxy preferences before web calls in...
tree
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commitdiff
2020-11-13
Ben Soares
JAL-3633 Memory only proxy auth password storage. Open...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 Added Proxy Authentication credentials in...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 Remember system set proxy properties. Add...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3633 ensure check both or https:// for urls
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3628 Error when saving alert box has been moved...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3676 More explicit tooltip about resetting log...
tree
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commitdiff
2020-11-12
Ben Soares
JAL-3676 Removed BACKUPFILESPRESETENTRY logging for...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 Fixed oddly worded and non-formatted error...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 improvement for visual selection of console...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 code review -- added non-listed Level into...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3676 Added Log Level ComboBox and Copy to Clipboard...
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 Even more Cache.log.debug statements
tree
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commitdiff
2020-11-10
Ben Soares
JAL-3628 More Cache.log.debug statements
tree
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commitdiff
2020-09-21
Jim Procter
Merge branch 'merge_review/JAL-3490_2_11_2_develop...
tree
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commitdiff
2020-09-03
gmungoc
JAL-3648 resize annotation panel after dragging to...
tree
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commitdiff
2020-08-31
Jim Procter
JAL-3732 - sequences can be moved up/down in cursor...
tree
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commitdiff
2020-08-17
Jim Procter
JAL-3490 merged with 2.11.2 develop
tree
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commitdiff
2020-08-17
Jim Procter
Merge branch 'task/JAL-3597memoryLeakTest' into develop
tree
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commitdiff
2020-08-03
Jim Procter
Merge branch 'bug/JAL-2983negativeSliderMin' into develop
tree
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commitdiff
2020-07-29
Jim Procter
JAL-3371 JAL-2983 don't modify 'extent' of slider ...
tree
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commitdiff
2020-07-27
Jim Procter
JAL-3697 show total number of features not shown
tree
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commitdiff
2020-07-14
gmungoc
JAL-1421 last change tidied up properly
tree
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commitdiff
2020-07-14
gmungoc
JAL-1421 types added to nameHash and nodeHash maps
tree
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commitdiff
2020-07-14
gmungoc
JAL-3597 additional references nulled, bug in test...
tree
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commitdiff
2020-07-06
gmungoc
JAL-3311 JAL-3141 JAL-3144 tidying obsolete message...
tree
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commitdiff
2020-06-29
Jim Procter
Merge branch 'develop' of source.jalview.org/git/jalvie...
tree
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commitdiff
2020-06-29
Jim Procter
JAL-3493 clear search highlights when escape/deselect all
tree
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commitdiff
2020-06-29
gmungoc
JAL-3674 more finessed asynchronous structure commands
tree
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commitdiff
2020-06-29
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2020-06-29
gmungoc
JAL-3518 corrected pulled up focusView() command
tree
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commitdiff
2020-06-29
gmungoc
JAL-3518 corrected action on pulled up closeViewer()
tree
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commitdiff
2020-06-26
Jim Procter
JAL-3673 make sure font metrics are updated if dealing...
tree
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commitdiff
2020-06-25
gmungoc
JAL-3518 pull up [get|list]ResidueAttributes to Structu...
tree
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commitdiff
2020-06-23
gmungoc
JAL-3518 separation of ChimeraXManager, pull up of...
tree
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commitdiff
2020-06-23
gmungoc
JAL-3518 pull up closeViewer() and external viewer...
tree
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commitdiff
2020-05-29
gmungoc
JAL-2422 test updated
tree
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commitdiff
2020-05-29
gmungoc
JAL-3551 null pointer defence while structure files...
feature/JAL-3551Pymol
tree
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commitdiff
2020-05-26
gmungoc
JAL-1761 pattern for structure viewer construction...
tree
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commitdiff
2020-05-24
Jim Procter
JAL-3407 redact Java 8 incompatible '<>' with anonymous...
tree
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commitdiff
2020-05-21
gmungoc
JAL-3551 copy Jalview features to Pymol 'p' (with pull...
tree
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commitdiff
2020-05-20
gmungoc
JAL-3626 use Viewer.scriptWait() to send Jmol commands...
tree
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commitdiff
2020-05-19
gmungoc
Merge branch 'develop' into feature/JAL-3551Pymol
tree
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commitdiff
2020-05-18
gmungoc
Merge branch 'Jalview-JS/develop' into develop
tree
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commitdiff
2020-05-15
gmungoc
JAL-3551 pull up Close Viewer dialog to base class
tree
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commitdiff
2020-05-15
gmungoc
Merge branch 'feature/JAL-3551Pymol' into feature/JAL...
tree
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commitdiff
2020-05-15
gmungoc
JAL-3551 raise label on ('highlight') structure residue...
tree
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commitdiff
2020-05-11
gmungoc
JAL-2422 JAL-3551 viewer text/variables generalised...
tree
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commitdiff
2020-05-11
gmungoc
JAL-2422 restore saved ChimeraX session from project
tree
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commitdiff
2020-05-01
gmungoc
JAL-3613 check sequence overlap when matching search...
tree
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commitdiff
2020-04-30
gmungoc
JAL-3551 save structure viewer session refactorings...
tree
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commitdiff
2020-04-25
gmungoc
Merge branch 'develop' into feature/JAL-3551Pymol
tree
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commitdiff
2020-04-21
Jim Procter
JAL-3407 add GPL license to Jalview source files
tree
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commitdiff
2020-04-21
gmungoc
JAL-3603 load annotation file from RELATIVE_URL in...
tree
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commitdiff
2020-04-16
BobHanson
JAL-3587 Load Project bug
tree
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commitdiff
2020-04-16
gmungoc
JAL-3567 report mapped location for virtual features...
tree
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commitdiff
2020-04-14
gmungoc
JAL-3583 remove debug logging, Javadoc added
tree
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commitdiff
2020-04-12
gmungoc
JAL-3583 consistent last[Formatted]Tooltip, show once...
tree
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commitdiff
2020-04-07
soares
merge from develop: Most of the changes
tree
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commitdiff
2020-04-06
Jim Procter
JAL-3407 redact java 8 incompatible type inference
tree
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commitdiff
2020-04-06
gmungoc
JAL-3581 no hidden sequence marker if hidden markers...
tree
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commitdiff
2020-04-06
gmungoc
JAL-3581 no hidden sequence marker if hidden markers...
tree
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commitdiff
2020-04-06
gmungoc
Merge branch 'develop' into Jalview-JS/develop
tree
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commitdiff
2020-04-06
gmungoc
JAL-3579 no Feature Editor if features not shown
tree
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commitdiff
2020-03-30
gmungoc
JAL-3210 debug logging commented out
tree
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commitdiff
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