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added help and documentation for annotation editing.
[jalview.git]
/
src
/
jalview
/
gui
/
2005-07-11
amwaterhouse
Release and build date methods changed
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commitdiff
2005-07-07
amwaterhouse
press del to cut
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commitdiff
2005-07-07
amwaterhouse
delete markers from start to end
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commitdiff
2005-07-07
amwaterhouse
Remove all gaps must check jSize
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2005-07-06
amwaterhouse
dont add null group
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-16
amwaterhouse
dont add sequence twice to new group
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2005-06-16
amwaterhouse
Sort Groups modified
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2005-06-16
amwaterhouse
remove gaps applies to selected area
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2005-06-15
amwaterhouse
Check colours not null
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2005-06-15
amwaterhouse
check colourscheme is not null
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2005-06-15
amwaterhouse
paintrefresher
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commitdiff
2005-06-15
amwaterhouse
add/remove updated
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commitdiff
2005-06-15
amwaterhouse
Column selection changed
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commitdiff
2005-06-15
amwaterhouse
REmove commented out lines
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commitdiff
2005-06-15
amwaterhouse
allow for fastpaint
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2005-06-15
amwaterhouse
add / remove editable columns
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2005-06-14
amwaterhouse
add version
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commitdiff
2005-06-14
jprocter
pad-1 gaps fixed.
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commitdiff
2005-06-14
jprocter
slight modification to srs query so it takes both unipr...
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commitdiff
2005-06-14
amwaterhouse
update conservation colours after edit
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commitdiff
2005-06-14
amwaterhouse
ToolTip updated
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commitdiff
2005-06-14
amwaterhouse
add value to conservation mouseover
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commitdiff
2005-06-14
amwaterhouse
if seq is null, dont check pdb
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commitdiff
2005-06-14
amwaterhouse
mouse pressed moved to mouseclicked
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commitdiff
2005-06-14
amwaterhouse
Deselect sets annotationPanel activeres null
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commitdiff
2005-06-14
amwaterhouse
PaintRefresher must be sent alignment
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commitdiff
2005-06-14
amwaterhouse
super.paintComponent
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2005-06-14
amwaterhouse
protected now public
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commitdiff
2005-06-14
amwaterhouse
tooltips instant (hopefully)
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2005-06-14
amwaterhouse
No spaces allowed in sequence name
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2005-06-14
amwaterhouse
Load/Save trees
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commitdiff
2005-06-14
amwaterhouse
Returns TreePanel when opening Newick
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commitdiff
2005-06-13
jprocter
null pointer fix.
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commitdiff
2005-06-13
amwaterhouse
clustal probs
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2005-06-13
amwaterhouse
quit saves screen size
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2005-06-13
amwaterhouse
Updates checkboxes on load
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commitdiff
2005-06-13
amwaterhouse
PaintRefresh changed
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commitdiff
2005-06-10
amwaterhouse
SeqFetcher modified
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commitdiff
2005-06-10
amwaterhouse
Fastpaint is false initially
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commitdiff
2005-06-08
amwaterhouse
recalc group conserve
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2005-06-08
amwaterhouse
Recalc accelerated
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2005-06-08
amwaterhouse
Sets sequence features
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2005-06-08
amwaterhouse
Formatted source
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commitdiff
2005-06-08
amwaterhouse
GPL license added
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commitdiff
2005-06-08
amwaterhouse
Add email to about
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commitdiff
2005-06-06
amwaterhouse
closes if accepted
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commitdiff
2005-06-05
jprocter
made error for browser configuration on unix a bit...
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commitdiff
2005-06-03
jprocter
Reinstated 'create tree from selected region only'...
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commitdiff
2005-06-02
amwaterhouse
Cut and paste changed
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commitdiff
2005-06-02
amwaterhouse
Reverse order for windows, readin from url
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commitdiff
2005-06-02
amwaterhouse
startup file is jalview.org
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commitdiff
2005-06-02
amwaterhouse
Name of xml file changed
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commitdiff
2005-05-30
jprocter
Added clustalW 'realignment' (primitive)
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commitdiff
2005-05-30
jprocter
added default ClustalWS or MuscleWS to remove gaps.
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commitdiff
2005-05-30
jprocter
modified history for redundancy removal.
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commitdiff
2005-05-30
jprocter
fixed stacktrace potential for pairwise alignment action.
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commitdiff
2005-05-30
jprocter
Modified output on stdout for similarity matrix.
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commitdiff
2005-05-27
jprocter
right ordering for RedundancyPanel constructor
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2005-05-27
jprocter
Added jobFail state
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2005-05-27
amwaterhouse
Check if colos are null
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commitdiff
2005-05-27
amwaterhouse
Cut and paste changes
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commitdiff
2005-05-27
amwaterhouse
Add cut and paste menus
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2005-05-27
amwaterhouse
CutAndPaste changed
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2005-05-27
jprocter
recovered changes from v 1.84
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commitdiff
2005-05-27
amwaterhouse
Check if usrCol is null
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2005-05-27
amwaterhouse
New cut and paste
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2005-05-26
jprocter
fixed redundancy Undo and allowed it to work on UNALIGN...
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commitdiff
2005-05-26
jprocter
bug fix in jpred client. TreeViewer display state and...
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commitdiff
2005-05-26
amwaterhouse
check for null residues
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2005-05-26
amwaterhouse
DOnt add Conservation graph to every residue
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2005-05-25
amwaterhouse
more clustalx bugs fixed
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2005-05-25
amwaterhouse
c&p changed
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2005-05-25
amwaterhouse
usercolours changed
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2005-05-25
amwaterhouse
output text to textbox
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2005-05-25
amwaterhouse
all colours can threshold
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2005-05-25
amwaterhouse
selectiongroup could be null
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2005-05-25
amwaterhouse
saves usercolours
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2005-05-25
amwaterhouse
formatforoutput never used
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2005-05-25
amwaterhouse
output values to textbox
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commitdiff
2005-05-25
jprocter
added jalview.browser property so a linux user can...
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commitdiff
2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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commitdiff
2005-05-24
jprocter
Added more firePropertyChange calls - mainly for sequen...
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2005-05-24
jprocter
added PropertyChangeListeners for alignviewport.alignme...
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commitdiff
2005-05-24
amwaterhouse
remove .
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2005-05-24
amwaterhouse
setDefaultFileFormat
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2005-05-24
amwaterhouse
setgraphics black
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2005-05-23
jprocter
Added PadGaps and made treeSortMenu dynamic (it gets...
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commitdiff
2005-05-23
amwaterhouse
colour groups by text colour
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commitdiff
2005-05-23
amwaterhouse
make sure fonts are not null
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2005-05-23
amwaterhouse
remove separator
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2005-05-23
amwaterhouse
new savestate method
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commitdiff
2005-05-23
amwaterhouse
boxes, colour text, show text added to groups
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commitdiff
2005-05-23
amwaterhouse
historyitem added
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commitdiff
2005-05-22
jprocter
include MsaWS ordering but not perfect (undo destroys...
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commitdiff
2005-05-22
jprocter
Added alignment ordering option to 'Sort by' and implem...
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2005-05-20
jprocter
added placeholder indicators and menu item
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2005-05-20
amwaterhouse
DEFAULT_FILE_FORMAT added
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2005-05-20
jprocter
sequence place holder reveal menu item.
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commitdiff
2005-05-20
amwaterhouse
startup file added
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git://source.jalview.org / jalview.git / history