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JAL-3383 removed FeatureStore.getFeatures() as 'breaks encapsulation'
[jalview.git] / src / jalview / gui /
2019-01-03 gmungocJAL-3181 order link menu items tree | commitdiff
2018-12-25 hansonrbetter Jmol help link tree | commitdiff
2018-12-20 Jim ProcterJAL-1767 port save/load PCA panel to JAXB - JAL-3063 tree | commitdiff
2018-12-20 Jim ProcterJAL-3171 JAL-3063 merge updates from JAL-1767 tree | commitdiff
2018-12-20 hansonrseq panel issue with shift-left-mouse drag fix tree | commitdiff
2018-12-20 hansonrlabel work; adds preliminary _j2sclasslist.txt tree | commitdiff
2018-12-19 Jim ProcterMerge branch 'features/JAL-1767pcaInProject' into bug... tree | commitdiff
2018-12-19 gmungocJAL-2621 Overview uses hand cursor in drag box, crossha... bug/JAL-2621 tree | commitdiff
2018-12-18 gmungocMerge branch 'JAL-3048dialogRunner2' into Jalview-BH... tree | commitdiff
2018-12-18 gmungocJAL-3032 revert table repaint customisations tree | commitdiff
2018-12-18 gmungocJAL-3048 DialogRunnerI reduced to minimal implementation tree | commitdiff
2018-12-18 hansonrremoving special needs for JavaScript table repainting tree | commitdiff
2018-12-18 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into tree | commitdiff
2018-12-18 hansonrtable work tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into... tree | commitdiff
2018-12-17 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2750' into develop tree | commitdiff
2018-12-17 gmungocJAL-3068 tidy status bar messaging tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 resolve dataset for imported projects via... tree | commitdiff
2018-12-14 Jim ProcterJAL-3171 register existing dataset for new view tree | commitdiff
2018-12-11 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into... tree | commitdiff
2018-12-10 gmungocJAL-3048 wip externalise trigger from RunResponse tree | commitdiff
2018-12-10 gmungocJAL-3048 DialogRunner changes (wip) tree | commitdiff
2018-12-10 gmungocJAL-1544 corrected 'adjunst' to 'adjust' tree | commitdiff
2018-12-10 hansonrFaster JTable processing; fixes Annotation painting... tree | commitdiff
2018-12-06 gmungocJAL-3048 response() renamed addResponse(); checkstyle... tree | commitdiff
2018-12-06 gmungocJAL-3048 explicit instead of default 'No' response... tree | commitdiff
2018-12-04 gmungocJAL-3032 set radio buttons transparent tree | commitdiff
2018-12-04 hansonrx,y switch in FeatureIcon tree | commitdiff
2018-12-03 gmungocJAL-3063 Castor removed from codebase tree | commitdiff
2018-12-03 gmungocMerge branch 'feature/JAL-3063JAXB' into feature/JAL... tree | commitdiff
2018-12-03 gmungocJAL-3168 include feature type in colour chooser dialog... tree | commitdiff
2018-12-03 gmungocJAL-3167 end cell editing on cancel in colour chooser tree | commitdiff
2018-12-03 gmungocJAL-3058 provide cancel callback method for colour... tree | commitdiff
2018-11-30 gmungocJAL-2420 don't offer Reveal All over alignment panel bug/JAL-2420revealAllMenu tree | commitdiff
2018-11-30 gmungocJAL-3166 catch NPE if all sequences are hidden bug/JAL-3166npeAllRowsHidden tree | commitdiff
2018-11-28 gmungocJAL-3164 redraw complement overview on hide columns bug/JAL-3164complementOverview tree | commitdiff
2018-11-28 gmungocJAL-3158 additional calls to reset 'selection changed... bug/JAL-3158selectionBroadcasts tree | commitdiff
2018-11-26 gmungocJAL-3162 only allow start <= end while modifying bug/JAL-3162featureStartLtEnd tree | commitdiff
2018-11-26 gmungocJAL-3032 make JS properties conditional on Jalview... tree | commitdiff
2018-11-26 hansonradds swingjs.overflow.hidden client property tree | commitdiff
2018-11-22 gmungocJAL-3161 limit tooltip and status updates to visible... bug/JAL-3161annotationTooltipRange tree | commitdiff
2018-11-19 Jim ProcterJAL-3127 drop redundant hidden representative sequences... tree | commitdiff
2018-11-19 Jim ProcterJAL-3127 JAL-2773 don’t need to call paintAlignment... tree | commitdiff
2018-11-19 Jim ProcterJAL-3127 tidier tree group colour -> view propagation tree | commitdiff
2018-11-19 gmungocJAL-3154 disable drag to reorder JTable columns bug/JAL-3154tableColumnDrag tree | commitdiff
2018-11-19 gmungocJAL-3032 J2S variant for painting JTable tree | commitdiff
2018-11-18 hansonradds JS hook for JTable repaint tree | commitdiff
2018-11-18 hansonrBH - suggestion to turn off column dragging in Java... tree | commitdiff
2018-11-16 gmungocJAL-2069 wider dialog so all fields show! tree | commitdiff
2018-11-09 Jim ProcterJAL-3127 polished setColor after review tree | commitdiff
2018-11-08 gmungocJAL-3048 use JalviewJS compatible JalviewFileChooser... tree | commitdiff
2018-11-05 Ben SoaresJAL-3141 couple of minor fixes for example files being... tree | commitdiff
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing... tree | commitdiff
2018-11-01 gmungocMerge branch 'feature/JAL-3143ensemblJSON' into tree | commitdiff
2018-11-01 Ben SoaresJAL-3141 Preferences 'Backups' tab now fits. Moved... tree | commitdiff
2018-11-01 gmungocMerge branch 'feature/JAL-3144noJTree' into tree | commitdiff
2018-11-01 gmungocMerge branch 'Jalview-BH/JAL-3026' into tree | commitdiff
2018-11-01 gmungocJAL-3048 JAL-3056 reinstate save/load project, colour... Jalview-BH/JAL-3026 tree | commitdiff
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn... tree | commitdiff
2018-10-31 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into... feature/JAL-3144noJTree tree | commitdiff
2018-10-30 gmungocJAL-3144 left aligned looks better (and works in Jalvie... tree | commitdiff
2018-10-30 gmungocJAL-3144 close SequenceFetcher before opening PDB/Unipr... tree | commitdiff
2018-10-30 gmungocJAL-3144 spelling, Javadoc, abstract method for JalviewJS tree | commitdiff
2018-10-29 gmungocJAL-3144 SequenceFetcher without JDatabaseTree tree | commitdiff
2018-10-25 Ben SoaresJAL-3141 Ostensibly all backups working for alignment... tree | commitdiff
2018-10-17 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into Jalview-BH... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 reinstate ability to set sequence ID colour... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup to create & propag... tree | commitdiff
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup() to add group... tree | commitdiff
2018-10-16 Jim Procterviewport flag to indicate when structure view needs... tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 TODO - resolve reference to Viewport for group... tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating... tree | commitdiff
2018-10-08 gmungocJAL-1244 comments, javadoc, method signature tweaks feature/JAL-1244stretchStatusMsg tree | commitdiff
2018-10-08 gmungocJAL-1244 editSequence extract method refactoring tree | commitdiff
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap tree | commitdiff
2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group... tree | commitdiff
2018-10-04 gmungocJAL-1244 no status message (yet) for locked edit of... tree | commitdiff
2018-10-04 gmungocJAL-1244 status message for insert/delete gaps on singl... tree | commitdiff
2018-10-04 gmungocJAL-1244 status message while dragging a stretch group tree | commitdiff
2018-10-04 gmungocJAL-3132 set status message when over sequence id or... tree | commitdiff
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right... tree | commitdiff
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above... tree | commitdiff
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition tree | commitdiff
2018-10-02 gmungocJAL-3093 limited Consensus popup menu when in wrapped... tree | commitdiff
2018-10-02 gmungocJAL-3093 added MousePos.isOverAnnotation() for extra... tree | commitdiff
2018-10-01 gmungocJAL-3093 'read-only' annotations when in wrapped mode tree | commitdiff
2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip... tree | commitdiff
2018-10-01 gmungocJAL-3093 show annotation tooltips and status message... tree | commitdiff
2018-09-28 gmungocJAL-3063 service param files read/saved using JAXB... tree | commitdiff
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi... tree | commitdiff
2018-09-26 gmungocJAL-3125 tidy up tree | commitdiff
2018-09-26 gmungocJAL-3125 avoid slider 'rounding' threshold field value tree | commitdiff
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour tree | commitdiff
2018-09-19 gmungocJAL-3120 preserve plain colour value when changing... tree | commitdiff
2018-09-19 Jim ProcterJAL-2808 JAL-3026 deleted all commented out tab code... tree | commitdiff
2018-09-19 gmungocJAL-2808 JAL-3032 drop tabbed layout for Colours and... tree | commitdiff
2018-09-19 gmungocJAL-3063 use JAXB for 'Save as Project' and load projec... tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user defined colours using JAXB tree | commitdiff
2018-09-18 gmungocJAL-3063 Save/Load user colour scheme using JAXB tree | commitdiff
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