| 2006-11-20 |
amwaterhouse | check cursor is visible for hidden cols |
tree | commitdiff |
| 2006-11-20 |
amwaterhouse | look for current alignframe to search |
tree | commitdiff |
| 2006-11-15 |
amwaterhouse | dont adjust aligments if they're the same size |
tree | commitdiff |
| 2006-11-15 |
amwaterhouse | Add remove seq from multiple views, must fire alignment... |
tree | commitdiff |
| 2006-11-15 |
amwaterhouse | IdMask must be Max seq end, not seq width |
tree | commitdiff |
| 2006-11-15 |
amwaterhouse | right align ids |
tree | commitdiff |
| 2006-11-14 |
amwaterhouse | minimize and raise associated windows |
tree | commitdiff |
| 2006-11-14 |
amwaterhouse | Close all added |
tree | commitdiff |
| 2006-11-14 |
amwaterhouse | Paintrefresh alignpanel |
tree | commitdiff |
| 2006-11-14 |
amwaterhouse | set seqColours null |
tree | commitdiff |
| 2006-11-14 |
amwaterhouse | recalc cons for group size change |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | REload from URL |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Enable lower case colours |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Text colour adapter |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | sequence colours and text colours added |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | colours in viewport |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Save text colours |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Group Menu level changed |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Colour text |
tree | commitdiff |
| 2006-11-13 |
amwaterhouse | Sequence colour in viewport |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | remove system.out |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | smooth font gone, setFileName and close open alignPanel |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | close frame true |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | smooth fonts moved here |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | cut and paste input output |
tree | commitdiff |
| 2006-11-09 |
amwaterhouse | close menu item true |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Reload alignment |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Reload alignment |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Text by default |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Use sequence description |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Dont set the dataset name and description |
tree | commitdiff |
| 2006-11-08 |
amwaterhouse | Tooltip on mouseover |
tree | commitdiff |
| 2006-11-07 |
amwaterhouse | Dont load trees if copying Viewport |
tree | commitdiff |
| 2006-11-07 |
amwaterhouse | Check features.length>0 |
tree | commitdiff |
| 2006-11-07 |
amwaterhouse | Color updated for new seq, OK is default option |
tree | commitdiff |
| 2006-11-07 |
amwaterhouse | Tidy up group size after alignmentChanged |
tree | commitdiff |
| 2006-11-07 |
amwaterhouse | Add keylistener to InternalFrame, not canvas |
tree | commitdiff |
| 2006-11-06 |
amwaterhouse | Only recalc consensus for start to end of group |
tree | commitdiff |
| 2006-11-06 |
amwaterhouse | dont limit menu size |
tree | commitdiff |
| 2006-11-06 |
amwaterhouse | accelerators, save menu item |
tree | commitdiff |
| 2006-11-03 |
amwaterhouse | Alignpanel is not new if copied from j2xml |
tree | commitdiff |
| 2006-11-03 |
amwaterhouse | Remove unnecessary refresh |
tree | commitdiff |
| 2006-11-03 |
amwaterhouse | Use Jalview2XML to copy AlignmentPanel |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | return if image is null |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | Update editMenuBar after alignment changed |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | Set menu state in alignFrame |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | Fire align change for case change |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | History is per viewport |
tree | commitdiff |
| 2006-11-02 |
amwaterhouse | selected states set in updateMenusFromViewport |
tree | commitdiff |
| 2006-10-30 |
amwaterhouse | Fix for feature name amended |
tree | commitdiff |
| 2006-10-30 |
amwaterhouse | Update features |
tree | commitdiff |
| 2006-10-30 |
amwaterhouse | conservation lock |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | Remove consensus annotation if out of memory |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | updatingConsensus, updatingConservation is static ... |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | PaintRefresher can calculate seqs added or removed |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | Dont remove or add PaintRefresher registrations for... |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | -1 error |
tree | commitdiff |
| 2006-10-27 |
amwaterhouse | Reset colour schemes and alignmentChanged moved to... |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | Only adds history item if size>0 |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | void changeCase(ActionEvent e |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | set quality to null if removed |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | showConservation, quality, identity not used |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | Dont readd the undo |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | sequence may be null if hidden or deleted |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | Set alignFrame of gathered panels to be the source... |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | remove gaps size range |
tree | commitdiff |
| 2006-10-26 |
amwaterhouse | Dont scroll off width-1 |
tree | commitdiff |
| 2006-10-25 |
amwaterhouse | Return if negative width, ie alignment deleted |
tree | commitdiff |
| 2006-10-25 |
amwaterhouse | Get sequence in routine |
tree | commitdiff |
| 2006-10-25 |
amwaterhouse | viewport.hasHiddenColumns updated after undo/redo performed |
tree | commitdiff |
| 2006-10-25 |
amwaterhouse | EditCommand added to AlignFrame |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Must set alignIndex before delete takes place |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Use EditCommand.Cut |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | EditCommand implemented |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | must translate graphics back the same amountcvs diff... |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Change Case is undoable |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | SequenceIndex might be beyond old height |
tree | commitdiff |
| 2006-10-24 |
amwaterhouse | Must catch image outOfMemoryError |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | showqual, showcons never used |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | remove html and body from tooltip |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | new feature args |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Can set description for new features |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | Faded anntotations when recalculating |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | set conserve and quality null if outofmemory |
tree | commitdiff |
| 2006-10-18 |
amwaterhouse | No longer a FeatureListener |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | showQuality may be updated during archive file load |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Add features from Popupmenu |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservat... |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Annotasiont[j] might be null |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine |
tree | commitdiff |
| 2006-10-12 |
amwaterhouse | RepresentGroup count items |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | No need to find index when deleting |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Calculate alWidth earlier |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Must repaint whole alignPanel |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Only getGroups once if groupEditingcvs update |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | aaIndex replaces aaHash |
tree | commitdiff |
| 2006-10-10 |
amwaterhouse | Consensus and conservation updated in threads |
tree | commitdiff |
| 2006-10-09 |
jprocter | imported Vamsas bindings and alpha vamsas client code... |
tree | commitdiff |
| next |
git://source.jalview.org / jalview.git / history