JAL-2089 fix broken help link
[jalview.git] / src / jalview / gui /
2016-09-29 Jim ProcterJAL-2236 include associated sequence id for annotation...
2016-09-27 gmungocJAL-2233 less verbose logging for Jmol
2016-09-27 gmungocJAL-2231 save preferred scroll height _without_ progres...
2016-09-22 gmungocJAL-1421 typed ResidueProperties.propHash; JAL-2176...
2016-09-22 gmungocJAL-2216 null currentAlignFrame on close all windows...
2016-09-22 gmungocJAL-2216 explicitly null AnnotationPanel and Annotation...
2016-09-22 gmungocJAL-2216 new dispose() method to null references
2016-09-21 Jim ProcterJAL-2215 fix - trigger alignment update when ‘ignore...
2016-09-19 gmungocJAL-2118 reorder annotations after add/delete/hide...
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection...
2016-09-16 gmungocJAL-2183 avoid duplicate closeDialog()
2016-09-13 tcofoegbuJAL-2195 bug fix to enable restoring jmol session save...
2016-09-07 Jim ProcterMerge branch 'develop' into bug/JAL-1803_JAL-2157
2016-09-07 Jim ProcterJAL-2191 comments re chimera view code redundancy and...
2016-09-04 Jim ProcterJAL-1919 preserve filename on restore of project so...
2016-09-04 Jim ProcterJAL-1803 recover type field faithfully for mmCIF/PDB...
2016-09-04 Jim ProcterJAL-1803 restore property array for a sequence’s associ...
2016-09-01 Jim ProcterMerge branch 'bug/JAL-2034_fix' into develop
2016-09-01 Jim ProcterJAL-2034 - remember to reset needsOverviewUpdate at...
2016-09-01 gmungocJAL-2077 check isPopupTrigger in mouseReleased not...
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive...
2016-09-01 gmungocJAL-2077 do nothing in mousePressed if right button...
2016-09-01 gmungocJAL-2077 force defer right-click handling to mouseRelea...
2016-09-01 Jim ProcterJAL-1803 JAL-2188 experimental:
2016-08-31 gmungocJAL-2077 test isPopupTrigger in mouseReleased or mouseC...
2016-08-31 Jim ProcterJAL-2157 JAL-2154 simplify CanshowProducts code to...
2016-08-31 Jim ProcterJAL-2034 moved ‘isDefinedGroup’ flag to a test method...
2016-08-31 Jim ProcterJAL-2034 remove todo - answer is yes!
2016-08-31 gmungocJAL-2077 check for isPopupTrigger() in mousePressed...
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p... merge/develop_bug/JAL-2154projectMappings
2016-08-30 gmungocJAL-2183 defensive check for openFrameCount < 0 (should...
2016-08-30 gmungocJAL-2183 simplified database tree actionPerformed,...
2016-08-30 gmungocJAL-2183 revised change (= no change)
2016-08-30 gmungocJAL-2183 formatter added @Override (only)
2016-08-30 gmungocJAL-2183 removed redundant (overriden) add panel to...
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p...
2016-08-26 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-25 gmungocJAL-1854 missing case break statements added
2016-08-25 Jim ProcterMerge branch 'refactor/JAL-2106_sourceDbRef_revision...
2016-08-25 Jim ProcterMerge branch 'develop' into bug/JAL-2154projectMappings
2016-08-25 Jim ProcterMerge branch 'develop' into refactor/JAL-2106_sourceDbR...
2016-08-24 Jim ProcterJAL-2106 removed setSourceDBRef, refactor getSourceDBRe...
2016-08-24 gmungocJAL-1355 correct 'thereshold' to 'threshold' in message...
2016-08-24 gmungocJAL-1424 removed unused and duplicated message keys
2016-08-24 gmungocJAL-1424 tidy / recode MessageManager calls to support...
2016-08-24 gmungocJAL-1854 removed pointless method override
2016-08-24 gmungocJAL-1424 removed two redundant (overwritten) setText...
2016-08-24 gmungocJAL-1424 corrected Message bundle lookup key
2016-08-24 gmungocJAL-1424 recode calls to MessageManager to allow code...
2016-08-23 Jim ProcterMerge branch 'develop' into bug/JAL-2154projectMappings
2016-08-23 gmungocJAL-2176 unused field / methods removed
2016-08-19 gmungocJAL-2174 bug fixes + refactoring to allow + unit tests
2016-08-19 Jim ProcterJAL-2154 - possible patch .. but leads to new stringify...
2016-08-19 Jim ProcterJAL-2154 reorder the dataset sequences according to...
2016-08-19 Jim ProcterJAL-2154 belt-and-braces patch:
2016-08-19 Jim ProcterJAL-2154 verify mapping’s sequenceI ref has been resolv...
2016-08-18 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-18 gmungocJAL-2077 using Platform method to check for Ctrl-down
2016-08-18 gmungocJAL-1693 show warning dialog if unable to make CDS...
2016-08-18 gmungocJAL-2077 handling Cmd-click in scale panel for Mac...
2016-08-17 gmungocJAL-2146 status message now with formatted residue...
2016-08-17 gmungocJAL-2173 don't remove annotation from hidden columns
2016-08-16 gmungocJAL-2171 matching bracket default character for rna...
2016-08-16 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
2016-08-15 tcofoegbuJAL-1128 fix for truncated bottom boarder pixels in...
2016-08-13 Jim ProcterJAL-2154 refactor CrossRef UI code to its own class
2016-08-13 Jim ProcterJAL-2154 ignore all but the primary source resolved...
2016-08-13 Jim ProcterJAL-2154 make sure we wait for constructor thread to...
2016-08-12 gmungocJAL-2171 default SS symbol to existing (if present)
2016-08-11 Jim ProcterJAL-2154 jalview.gui.SequenceFetcher.fetchAndShow(db...
2016-08-11 Jim ProcterJAL-2154 JAL-1993 relocate show dbchooser action out...
2016-08-10 gmungocJAL-2124 i18n of "All" menu item
2016-08-10 gmungocJAL-2146 small optimisation (avoid String creation)
2016-08-10 gmungocJAL-2146 show Column no [Sequence no [Residue / pos...
2016-08-08 gmungocJAL-1577 rebuild menus when secondary structure manuall...
2016-08-05 gmungocJAL-2168 skip news feed if parameter "-nonews" is supplied
2016-08-05 gmungocJAL-1448 always use UK locale for formatted date properties
2016-08-04 gmungocJAL-2008 handle fast mouse drag of feature ordering...
2016-08-04 gmungocJAL-2015 convert Color from colour picker to FeatureColour
2016-08-02 Jim ProcterJAL-2034 show greyed out image during overview update
2016-08-02 Jim ProcterMerge branch 'develop' into efficiency/JAL-2034_JAL...
2016-08-01 Jim ProcterMerge branch 'bug/JAL-2154projectMappings' into develop
2016-08-01 Jim ProcterJAL-1772 make sure we actually return reference to...
2016-07-29 Jim ProcterJAL-2164 JAL-1772 explodeViews can be static, so make...
2016-07-29 Jim ProcterJAL-2154 disable visual delay only after completed...
2016-07-29 Jim ProcterJAL-2154 register any new dataset codon frames only...
2016-07-29 Jim ProcterJAL-2154 only include mappings in dbref/alcodon in...
2016-07-27 Jim ProcterJAL-2154 toString for forward references
2016-07-27 Jim ProcterJAL-2163 set title for the alignframe from restored... patch/JAL-2156_JAL-2163_saveSplitFrameFromSaveAs_restoreTitles
2016-07-27 Jim ProcterJAL-2156 resolve and add complementary views for saveAl...
2016-07-27 Jim ProcterJAL-2156 refactor saveState & saveAlignment to common...
2016-07-27 Jim ProcterJAL-2156 getter for AlignFrame(s) held in a splitframe
2016-07-24 Jim ProcterJAL-2154 formatting
2016-07-24 Jim ProcterJAL-2154 keep track of incomplete sequences and report...
2016-07-24 Jim ProcterJAL-2154 systematic pattern for defining/resolving...
2016-07-23 Jim ProcterJAL-2154 patch the hack (Jalview2XML tests pass)
2016-07-20 gmungocJAL-2154 poke JSeq start/end into Vamsas sequence
2016-07-20 gmungocJAL-2023 avoid writing / loading empty mappings
2016-07-19 Jim ProcterMerge branch 'develop' into efficiency/JAL-2034_JAL...
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