Merge branch 'features/JAL-2446NCList' into features/JAL-2574findFeaturesByColumn
[jalview.git] / src / jalview / gui /
2017-05-02 Jim ProcterJAL-1632 validate CalculationChooser when selection...
2017-05-02 Jim ProcterJAL-1632 enable/disable CalculationChooser buttons...
2017-05-02 Jim ProcterJAL-1632 compare size of input against minimums for...
2017-05-02 Jim ProcterJAL-1632 OK->Calculate, Cancel->Close buttons
2017-05-02 Jim ProcterJAL-1632 removed ‘tree’ option and changed dialog layout
2017-05-02 gmungocJAL-2447 EXPERIMENTAL preference (option in Tools menu) features/JAL-2447experimentalFlag
2017-05-02 gmungocJAL-2499 inlined two 1-line methods
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside...
2017-05-02 kiramtJAL-2491 first addition of new event
2017-05-01 tcofoegbuJAL-2465 missed commit for refactore renaming of getPdb...
2017-05-01 tcofoegbuJAL-2465 bugfix and rerefactor renamed getPdbFile(...
2017-05-01 tcofoegbuJAL-2376 copied out patch from Phyre branch
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-27 Jim ProcterJAL-1933 use constant for preference token
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA...
2017-04-27 Jim ProcterJAL-2432 desktop: filter/select columns by threshold...
2017-04-27 gmungocJAL-2492 use SequenceFeatures.getNonPositionalFeatures()
2017-04-26 kiramtMerge remote-tracking branch 'origin/features/JAL-2388h...
2017-04-26 kiramtJAL-2388 last separation of hidden columns/col selection
2017-04-26 kiramtJAL-2388 Tidies and unit tests
2017-04-25 kiramtJAL-2388 Reverted and re-did applet changes
2017-04-25 kiramtJAL-2388 Tidies and other corrections so applet compiles
2017-04-25 kiramtJAL-2388 And corrected OverviewCanvas for applet
2017-04-25 kiramtJAL-2388 Updated applet to show/hide hidden regions...
2017-04-25 kiramtJAL-2388 Working hidden regions hide/show in desktop
2017-04-24 kiramtMerge remote-tracking branch
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-04-24 kiramtJAL-2388 Finished split of hidden columns and selected...
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped...
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row...
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection...
2017-04-21 gmungocJAL-2423 tweak tree panel title, add Spanish text
2017-04-21 kiramtJAL-2388 Tidies
2017-04-21 kiramtJAL-2388 Alignment col and row collections with iterators
2017-04-19 gmungocJAL-2435 mirror font changes with middle mouse drag
2017-04-19 gmungocMerge branch 'develop' into features/JAL-2435splitScree...
2017-04-19 kiramtMerge remote-tracking branch 'origin/develop' into
2017-04-19 gmungocJAL-2483 use SequenceFeatures to look up groups, types...
2017-04-18 gmungocJAL-2480 SequenceFeaturesI encapsulates features api
2017-04-17 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-12 gmungocJAL-1632 removed check for aligned sequences for Tree...
2017-04-12 gmungocJAL-1632 remove unused check for sequences aligned
2017-04-12 gmungocJAL-1632 one PCA/Tree per panel, closed when panel...
2017-04-11 tcofoegbuPull from develop features/JAL-2473_set-minimium-dimensions
2017-04-11 tcofoegbuJAL-2473 removed unused fields in JalviewDialog
2017-04-11 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux...
2017-04-10 tcofoegbuJAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux
2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher...
2017-04-10 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom...
2017-04-10 gmungocJAL-2361 option to save on OK of changed named colour...
2017-04-07 gmungocJAL-2393 code tidying for review comments
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-06 gmungocJAL-2361 make a modified saved scheme the backout check...
2017-04-05 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-05 gmungocJAL-2361 simplify constructors, select unsaved but...
2017-04-05 gmungocJAL-2361 apply any saved changes to current colour...
2017-04-04 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314
2017-04-03 gmungocJAL-2435 further adjustments to behaviour in split...
2017-04-03 gmungocMerge branch 'develop' into features/JAL-2435splitScree...
2017-03-31 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-03-31 gmungocMerge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView
2017-03-31 gmungocJAL-2435 tidy code
2017-03-31 gmungocJAL-2435 slightly more sensible behaviour changing...
2017-03-30 gmungocMerge branch 'develop' into features/JAL-2435splitScree...
2017-03-30 gmungocJAL-1608 leave Create Group, Remove Group menu items...
2017-03-30 gmungocJAL-2401 code and help tidy for review comments
2017-03-30 gmungocJAL-2401 don't apply lower case colour to upper case
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups
2017-03-29 kiramtJAL-2388 New rendering code, extensions to support...
2017-03-27 gmungocJAL-2416 tooltip with descriptions for score models...
2017-03-27 gmungocJAL-2416 add score model description field for tooltip...
2017-03-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin...
2017-03-24 Jim ProcterJAL-2360 fix applet build by separating castor XML...
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text...
2017-03-24 gmungocJAL-1632 named parameters
2017-03-24 kiramtJAL-2388 Removing AlignmentPanel dependency (mostly)
2017-03-24 kiramtJAL-2314 Tidy up
2017-03-24 gmungocJAL-2464 fix cancel tree print behaviour
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca...
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues
2017-03-23 gmungocJAL-1632 suppress PID parameter options in Tree/PCA...
2017-03-23 gmungocJAL-2464 fix cancel tree print behaviour
2017-03-23 kiramtJAL-2314 Tidies
2017-03-23 kiramtJAL-2388 Factored out applet overview canvas, threading...
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-22 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-03-22 kiramtJAL-2388 Rationalised overview panel drawing thread
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into
2017-03-22 kiramtJAL-2388 Reinstated original overview checks for annota...
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