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Recalc accelerated
[jalview.git]
/
src
/
jalview
/
gui
/
2005-06-08
amwaterhouse
Recalc accelerated
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commitdiff
2005-06-08
amwaterhouse
Sets sequence features
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commitdiff
2005-06-08
amwaterhouse
Formatted source
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commitdiff
2005-06-08
amwaterhouse
GPL license added
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commitdiff
2005-06-08
amwaterhouse
Add email to about
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commitdiff
2005-06-06
amwaterhouse
closes if accepted
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commitdiff
2005-06-05
jprocter
made error for browser configuration on unix a bit...
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commitdiff
2005-06-03
jprocter
Reinstated 'create tree from selected region only'...
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commitdiff
2005-06-02
amwaterhouse
Cut and paste changed
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commitdiff
2005-06-02
amwaterhouse
Reverse order for windows, readin from url
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commitdiff
2005-06-02
amwaterhouse
startup file is jalview.org
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commitdiff
2005-06-02
amwaterhouse
Name of xml file changed
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commitdiff
2005-05-30
jprocter
Added clustalW 'realignment' (primitive)
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commitdiff
2005-05-30
jprocter
added default ClustalWS or MuscleWS to remove gaps.
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commitdiff
2005-05-30
jprocter
modified history for redundancy removal.
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commitdiff
2005-05-30
jprocter
fixed stacktrace potential for pairwise alignment action.
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commitdiff
2005-05-30
jprocter
Modified output on stdout for similarity matrix.
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commitdiff
2005-05-27
jprocter
right ordering for RedundancyPanel constructor
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commitdiff
2005-05-27
jprocter
Added jobFail state
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commitdiff
2005-05-27
amwaterhouse
Check if colos are null
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commitdiff
2005-05-27
amwaterhouse
Cut and paste changes
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commitdiff
2005-05-27
amwaterhouse
Add cut and paste menus
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commitdiff
2005-05-27
amwaterhouse
CutAndPaste changed
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commitdiff
2005-05-27
jprocter
recovered changes from v 1.84
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commitdiff
2005-05-27
amwaterhouse
Check if usrCol is null
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commitdiff
2005-05-27
amwaterhouse
New cut and paste
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commitdiff
2005-05-26
jprocter
fixed redundancy Undo and allowed it to work on UNALIGN...
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commitdiff
2005-05-26
jprocter
bug fix in jpred client. TreeViewer display state and...
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commitdiff
2005-05-26
amwaterhouse
check for null residues
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commitdiff
2005-05-26
amwaterhouse
DOnt add Conservation graph to every residue
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commitdiff
2005-05-25
amwaterhouse
more clustalx bugs fixed
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commitdiff
2005-05-25
amwaterhouse
c&p changed
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commitdiff
2005-05-25
amwaterhouse
usercolours changed
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commitdiff
2005-05-25
amwaterhouse
output text to textbox
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commitdiff
2005-05-25
amwaterhouse
all colours can threshold
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commitdiff
2005-05-25
amwaterhouse
selectiongroup could be null
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commitdiff
2005-05-25
amwaterhouse
saves usercolours
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commitdiff
2005-05-25
amwaterhouse
formatforoutput never used
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commitdiff
2005-05-25
amwaterhouse
output values to textbox
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commitdiff
2005-05-25
jprocter
added jalview.browser property so a linux user can...
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commitdiff
2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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commitdiff
2005-05-24
jprocter
Added more firePropertyChange calls - mainly for sequen...
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commitdiff
2005-05-24
jprocter
added PropertyChangeListeners for alignviewport.alignme...
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commitdiff
2005-05-24
amwaterhouse
remove .
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commitdiff
2005-05-24
amwaterhouse
setDefaultFileFormat
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commitdiff
2005-05-24
amwaterhouse
setgraphics black
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commitdiff
2005-05-23
jprocter
Added PadGaps and made treeSortMenu dynamic (it gets...
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commitdiff
2005-05-23
amwaterhouse
colour groups by text colour
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commitdiff
2005-05-23
amwaterhouse
make sure fonts are not null
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commitdiff
2005-05-23
amwaterhouse
remove separator
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commitdiff
2005-05-23
amwaterhouse
new savestate method
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commitdiff
2005-05-23
amwaterhouse
boxes, colour text, show text added to groups
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commitdiff
2005-05-23
amwaterhouse
historyitem added
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commitdiff
2005-05-22
jprocter
include MsaWS ordering but not perfect (undo destroys...
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commitdiff
2005-05-22
jprocter
Added alignment ordering option to 'Sort by' and implem...
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commitdiff
2005-05-20
jprocter
added placeholder indicators and menu item
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commitdiff
2005-05-20
amwaterhouse
DEFAULT_FILE_FORMAT added
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commitdiff
2005-05-20
jprocter
sequence place holder reveal menu item.
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commitdiff
2005-05-20
amwaterhouse
startup file added
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commitdiff
2005-05-20
amwaterhouse
copy order maintained
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commitdiff
2005-05-20
amwaterhouse
Fasta FASTA
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commitdiff
2005-05-19
amwaterhouse
loading/saving changes
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commitdiff
2005-05-19
amwaterhouse
changes to jalviewfilechooser
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commitdiff
2005-05-19
amwaterhouse
% identity is consensus
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commitdiff
2005-05-19
amwaterhouse
no need for right mouse click
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commitdiff
2005-05-19
amwaterhouse
Load and Save State added
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commitdiff
2005-05-19
amwaterhouse
dont show redundant menuitems
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commitdiff
2005-05-19
amwaterhouse
load in gap symbol
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commitdiff
2005-05-19
amwaterhouse
block edit bug fixed
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commitdiff
2005-05-19
amwaterhouse
maintain original threshold value
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commitdiff
2005-05-19
amwaterhouse
changes to JalviewFileChooser
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commitdiff
2005-05-19
amwaterhouse
new class
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commitdiff
2005-05-12
amwaterhouse
corrections for find when edit takes place
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commitdiff
2005-05-09
amwaterhouse
paintComponent. not paint
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commitdiff
2005-05-09
amwaterhouse
correct conservation errors after edit
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commitdiff
2005-05-09
amwaterhouse
if imgWidth <0
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commitdiff
2005-05-06
amwaterhouse
wrap align correction for last row
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commitdiff
2005-05-06
amwaterhouse
add 1 to fastPaint, in case seqs of different length
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commitdiff
2005-05-06
amwaterhouse
if clustal + edit, make new clustal
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commitdiff
2005-05-05
amwaterhouse
Accelerator on menu takes care of actionkey
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commitdiff
2005-05-05
amwaterhouse
saveAsNewick
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commitdiff
2005-05-05
amwaterhouse
send rotCanvas sequence and viewport
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commitdiff
2005-05-04
amwaterhouse
renderer removed
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commitdiff
2005-05-04
amwaterhouse
no need to send pid, seqnum
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commitdiff
2005-05-04
amwaterhouse
SequenceRenderer changes
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commitdiff
2005-05-04
amwaterhouse
no need to send vector pid or seqnum
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commitdiff
2005-05-04
amwaterhouse
No need for this interface
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commitdiff
2005-05-03
jprocter
Better treatment of error states and cancellability...
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commitdiff
2005-05-03
amwaterhouse
formatAdapter.formatSequences and maintain annotation...
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commitdiff
2005-05-03
amwaterhouse
formatAdapter.formats
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commitdiff
2005-05-03
amwaterhouse
formatAdapter.readFile
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commitdiff
2005-05-03
amwaterhouse
change Container to Component
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commitdiff
2005-04-29
amwaterhouse
REad in defaultColour
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commitdiff
2005-04-29
amwaterhouse
preferences held statically
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commitdiff
2005-04-29
amwaterhouse
preferences moved to desktop
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commitdiff
2005-04-28
amwaterhouse
Preferences panel added
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commitdiff
2005-04-28
amwaterhouse
Viewport now looks at preferences when loading up
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commitdiff
2005-04-28
amwaterhouse
Set fullscreen if in preferences
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commitdiff
2005-04-28
amwaterhouse
can search ids
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commitdiff
2005-04-28
amwaterhouse
set as default added
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commitdiff
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git://source.jalview.org / jalview.git / history