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JAL-2698 spawn a thread to test for and raise auto associate dialogs for PDB file...
[jalview.git] / src / jalview / gui /
2017-08-29 Jim ProcterJAL-2698 spawn a thread to test for and raise auto... tree | commitdiff
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-08-10 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-10 gmungocJAL-2660 used saved value of ignoreGapsInConsensus... tree | commitdiff
2017-08-10 gmungocJAL-2505 apply changed description to new, not deleted... tree | commitdiff
2017-08-10 gmungocJAL-2658 ensure features dropdown entries are unique tree | commitdiff
2017-08-09 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-09 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... tree | commitdiff
2017-08-08 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-08 gmungocJAL-2650 configure new viewport settings before selecti... tree | commitdiff
2017-08-07 Jim ProcterMerge branch 'bug/JAL-2592userDefinedScheme' into develop tree | commitdiff
2017-08-03 gmungocJAL-2643 updated threshold on threshold value focus... tree | commitdiff
2017-08-03 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-03 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-03 gmungocJAL-2435 test for 'mirror font' option visible (not... tree | commitdiff
2017-08-02 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-01 Jim ProcterMerge branch 'bug/JAL-2632' into develop tree | commitdiff
2017-08-01 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-08-01 gmungocMerge branch 'feature/JAL-2611' into develop tree | commitdiff
2017-08-01 gmungocMerge branch 'bug/JAL-2630gradColourUpdateOverview... tree | commitdiff
2017-07-31 gmungocJAL-2622 don't vertical scroll wrapped alignment id... tree | commitdiff
2017-07-28 kiramtJAL-2632 Added paintAlignment(true) to show cols code tree | commitdiff
2017-07-28 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-28 gmungocJAL-147 corrected status bar message for wrapped scroll... tree | commitdiff
2017-07-28 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-28 gmungocJAL-2622 no vertical scroll of wrapped alignment from... tree | commitdiff
2017-07-28 gmungocJAL-2006 squash rounding errors at min/max threshold... tree | commitdiff
2017-07-28 gmungocJAL-2630 update Overview/structure from graduated colou... tree | commitdiff
2017-07-23 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-22 gmungocJAL-2623 initialise colour threshold slider correctly tree | commitdiff
2017-07-22 kiramtMerge branch 'develop' into feature/JAL-2611 tree | commitdiff
2017-07-19 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-07-18 gmungocJAL-147 don't scroll up beyond startRes = 0 bug/JAL-147scrollWrappedView tree | commitdiff
2017-07-18 gmungocJAL-147 corrected calculation of vertical scroll positi... tree | commitdiff
2017-07-18 gmungocJAL-147 draw up to last position of wrapped alignment! tree | commitdiff
2017-07-18 kiramtJAL-2611 Better tree | commitdiff
2017-07-17 kiramtJAL-2611 Still not happy with behaviour tree | commitdiff
2017-07-14 kiramtJAL-2611 First pass, not thrilled with hidden column... tree | commitdiff
2017-07-14 kiramtJAL-2611 Pre-merge checkin tree | commitdiff
2017-07-06 gmungocJAL-1858 fast paint wrapped highlights unless view... tree | commitdiff
2017-07-06 gmungocJAL-2605 ensure correct scale width calculation tree | commitdiff
2017-07-05 gmungocJAL-1858 fastpaint highlights on wrapped alignment tree | commitdiff
2017-07-04 gmungocJAL-147 remove redundant calls to update overview panel tree | commitdiff
2017-07-04 gmungocJAL-2608 tidy up OverviewPanel when closed tree | commitdiff
2017-07-04 gmungocJAL-147 call method that sets visible width when drawin... tree | commitdiff
2017-07-03 gmungocMerge branch 'develop' into bug/JAL-147scrollWrappedView tree | commitdiff
2017-07-03 gmungocJAL-147 correct width out-by-one drawing ids tree | commitdiff
2017-07-03 gmungocJAL-147 ViewportRanges calculate wrapped vertical scrol... tree | commitdiff
2017-07-03 gmungocJAL-147 don't draw ScalePanel when in wrapped mode tree | commitdiff
2017-07-03 gmungocJAL-2034 don't refresh Overview for selection in id... tree | commitdiff
2017-06-30 gmungocJAL-2505 correct handling of change of feature type tree | commitdiff
2017-06-30 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-30 gmungocJAL-147 don't page up above origin, repaint ids for... tree | commitdiff
2017-06-30 gmungocJAL-2602 pulled up identical methods to base class tree | commitdiff
2017-06-30 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-29 gmungocJAL-147 improved wrapped scrolling (including Overview... tree | commitdiff
2017-06-29 gmungocJAL-2605 exclude left/right scale in sequence column... tree | commitdiff
2017-06-28 gmungocMerge branch 'bug/JAL-2600resizeflicker' into develop tree | commitdiff
2017-06-28 kiramtJAL-2600 Tidies bug/JAL-2600resizeflicker tree | commitdiff
2017-06-28 kiramtJAL-2600 updates following review tree | commitdiff
2017-06-27 gmungocJAL-1858 repaint after Amend Features dialog tree | commitdiff
2017-06-27 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-27 kiramtJAL-2600 Tidies tree | commitdiff
2017-06-27 kiramtJAL-2600 Abandoned fastpaint for resize; now full repai... tree | commitdiff
2017-06-27 gmungocJAL-2602 check for null or empty description when copyi... tree | commitdiff
2017-06-27 gmungocJAL-1858 highlights on wrapped panel - work in progress tree | commitdiff
2017-06-27 gmungocJAL-147 scroll wrapped panel by one width's worth at... tree | commitdiff
2017-06-27 kiramtJAL-2600 Add in IdCanvas and checks for 0 size images tree | commitdiff
2017-06-27 kiramtJAL-2600 vertical fast paint too tree | commitdiff
2017-06-27 kiramtJAL-2600 fast painting on resize tree | commitdiff
2017-06-26 kiramtJAL-2600 reinstate original behaviour tree | commitdiff
2017-06-26 gmungocJAL-1858 ensure full redraw on 'remove all selections' tree | commitdiff
2017-06-24 gmungocJAL-1858 null img when doing full repaint of wrapped... tree | commitdiff
2017-06-24 gmungocJAL-1858 don't fastpaint highlights if wrapped format bug/JAL-1858fastPaintHighlights tree | commitdiff
2017-06-24 gmungocJAL-1858 refactored method to redraw previous/new highl... tree | commitdiff
2017-06-23 gmungocJAL-1858 handle hidden columns when computing region... tree | commitdiff
2017-06-23 gmungocJAL-1858 'fastPaint' of minimal region for highlights... tree | commitdiff
2017-06-21 gmungocJAL-2524 don't render up to a hidden marker beyond... tree | commitdiff
2017-06-15 gmungocMerge branch 'bug/JAL-2386groupConservationColouring... tree | commitdiff
2017-06-15 kiramtMerge remote-tracking branch 'origin/develop' into... bug/JAL-2591 tree | commitdiff
2017-06-15 gmungocMerge branch 'bug/JAL-2589gapColour' into develop tree | commitdiff
2017-06-14 gmungocJAL-2598 Sequence.getSequence return a copy of the... tree | commitdiff
2017-06-13 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-12 gmungocJAL-2577 mirror select/hide by annotation in split... tree | commitdiff
2017-06-12 gmungocJAL-2577 mirror hide/select columns by annotation acros... tree | commitdiff
2017-06-09 gmungocJAL-2592 distinguish "User Defined" (scheme name) from... bug/JAL-2592userDefinedScheme tree | commitdiff
2017-06-09 gmungocJAL-2594 avoid stack trace creating feature on gapped... tree | commitdiff
2017-06-08 kiramtJAL-2591 Refactor HiddenColumns to use ArrayList instea... tree | commitdiff
2017-06-08 kiramtJAL-2591 More HiddenColumns refactoring. Tests passing. tree | commitdiff
2017-06-08 gmungocJAL-2526 setStatusMessage avoid redundant findPosition... tree | commitdiff
2017-06-07 kiramtJAL-2591 Further refactoring (still incomplete) tree | commitdiff
2017-06-07 kiramtJAL-2591 More refactoring (incomplete) tree | commitdiff
2017-06-07 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-06-07 kiramtJAL-2591 updated HiddenColumns::findHiddenRegionPositio... tree | commitdiff
2017-06-07 kiramtJAL-2591 More rationalising of hiddencols tree | commitdiff
2017-06-07 gmungocJAL-2386 ensure group conservation shading is applied... tree | commitdiff
2017-06-07 kiramtJAL-2591 Overview window update interrupts tree | commitdiff
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