source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	3066	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	164768	AlignFrame.java	blob \| history \| raw
-rw-r--r--	32446	AlignViewport.java	blob \| history \| raw
-rw-r--r--	53478	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18577	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	14457	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	24936	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	9361	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	34919	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	29767	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	12678	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	20878	AppJmol.java	blob \| history \| raw
-rw-r--r--	5102	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19428	AppVarna.java	blob \| history \| raw
-rw-r--r--	13976	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2796	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23352	BlogReader.java	blob \| history \| raw
-rw-r--r--	17248	CalculationChooser.java	blob \| history \| raw
-rw-r--r--	24680	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	9173	ColourMenuHelper.java	blob \| history \| raw
-rw-r--r--	1006	ComboBoxTooltipRenderer.java	blob \| history \| raw
-rw-r--r--	17221	Console.java	blob \| history \| raw
-rw-r--r--	10577	CrossRefAction.java	blob \| history \| raw
-rw-r--r--	6131	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10784	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	23258	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	97687	Desktop.java	blob \| history \| raw
-rw-r--r--	4244	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2811	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15501	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	17166	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	53877	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	11069	Finder.java	blob \| history \| raw
-rwxr-xr-x	11912	FontChooser.java	blob \| history \| raw
-rw-r--r--	4205	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2770	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	12925	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12664	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3954	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15752	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	174948	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15568	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3627	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4442	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	9658	JvOptionPane.java	blob \| history \| raw
-rw-r--r--	8378	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2625	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24406	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rw-r--r--	4801	OverviewCanvas.java	blob \| history \| raw
-rwxr-xr-x	6847	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	21213	PCAPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3988	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	59303	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	40005	Preferences.java	blob \| history \| raw
-rw-r--r--	6965	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6325	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7696	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7602	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15659	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17216	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4199	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	13829	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	26326	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	55506	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	30747	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	14327	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	12064	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	22094	SplitFrame.java	blob \| history \| raw
-rw-r--r--	36602	StructureChooser.java	blob \| history \| raw
-rw-r--r--	7011	StructureViewer.java	blob \| history \| raw
-rw-r--r--	27310	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	7845	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	26754	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	22355	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	25297	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5329	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35576	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8289	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22011	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43567	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9807	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17654	WsPreferences.java	blob \| history \| raw