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Merge branch 'JAL-3878_ws-overhaul-3' into with_ws_overhaul-3
[jalview.git] / src / jalview / gui /
2020-02-04 gmungocJAL-2422 fixed stopProgressBar (broken in pull up refac... tree | commitdiff
2020-02-04 gmungocJAL-2422 pull up refactoring in preparation for Chimera... tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Change to JvOptionPane wrapper feature/JAL-3515-slivka-preferences tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Build a WSPreferences page for Slivka services. tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separat... tree | commitdiff
2020-01-31 gmungocJAL-2422 temporary hacks removed; use hex colours for... tree | commitdiff
2020-01-31 gmungocJAL-2422 more responsive Chimera/X path prompts in... tree | commitdiff
2020-01-30 gmungocJAL-2422 save/restore ChimeraX session tree | commitdiff
2020-01-28 gmungocJAL-2422 ChimeraX added to Preferences tree | commitdiff
2020-01-14 gmungocJAL-2422 proof of concept adaptations for ChimeraX... tree | commitdiff
2019-12-11 gmungocJAL-3490 revised layout and search algorithm (more... tree | commitdiff
2019-12-09 gmungocJAL-3490 pull up getViewAsVisibleContigs to base class... tree | commitdiff
2019-11-12 gmungocJAL-3274 resource path correction, code tidying (consta... tree | commitdiff
2019-11-05 gmungocJAL-3210 reverted (ignore previous commit) tree | commitdiff
2019-11-05 gmungocJAL-3120 JAL-3130 can't read "java.specification.versio... tree | commitdiff
2019-11-01 Ben SoaresJAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files tree | commitdiff
2019-10-31 gmungocJAL-3468 truncate feature description to 40 chars in... tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work... tree | commitdiff
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 slivka service discovery as a background threa... tree | commitdiff
2019-09-26 Jim ProcterJAL-3070 JAL-3066 JAL-2808 allow feature filter definit... tree | commitdiff
2019-09-26 gmungocJAL-3441 action double-click in Feature Type column... tree | commitdiff
2019-09-23 Jim ProcterJAL-3066 JAL-3070 pull up non-jabaws specific service... tree | commitdiff
2019-09-17 Jim ProcterJAL-3432 hide the slider when validator has no min... tree | commitdiff
2019-09-05 Mateusz WarownyJAL-3066 Implement clustaloWS using slivka system. tree | commitdiff
2019-08-19 gmungocJAL-3412 calculateIdWidth - more consistency, constants... tree | commitdiff
2019-08-13 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2019-08-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-29 gmungocJAL-3386 correct wrapped width calculation for headless... tree | commitdiff
2019-07-29 gmungocJAL-3377 more reused of SeqCanvas.computeWrappedGeometry tree | commitdiff
2019-07-29 gmungocJAL-3377 add seq-annotations gap to cheight not to... tree | commitdiff
2019-07-29 gmungocJAL-3377 Javadoc added for getWrappedHeight() tree | commitdiff
2019-07-29 gmungocJAL-3377 corrected wrapped widths height for IdCanvas tree | commitdiff
2019-07-29 gmungocJAL-3377 include seq-annotation spacing in getWrappedHe... tree | commitdiff
2019-07-19 gmungocJAL-3371 lastVal now String not Object tree | commitdiff
2019-07-19 gmungocJAL-3371 remove unused field tree | commitdiff
2019-07-19 gmungocJAL-3371 use gui.Slider for OptAndParamPage min-max... tree | commitdiff
2019-07-18 gmungocJAL-3371 JAL-2983 add gui.Slider to handle negative... tree | commitdiff
2019-07-16 gmungocJAL-2983 slider 'translated' to have a non-negative... tree | commitdiff
2019-07-16 gmungocJAL-3144 better error message if no database selected tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-15 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-12 ThomasJAL-2629 add sort by evalue and bit score tree | commitdiff
2019-07-11 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-07-10 tvaJAL-2629 fix incorrect hmmbuild on groups behaviour tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests tree | commitdiff
2019-07-05 gmungocJAL-3187 initial refactoring towards peptide variant... tree | commitdiff
2019-07-03 tvaJAL-2629 can now filter by sequence e-value or bit... tree | commitdiff
2019-07-02 Jim ProcterMerge branch 'develop' into tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-07-02 gmungocJAL-3071 restore correct if-else branches in startScrolling tree | commitdiff
2019-07-02 tvaJAL-2629 add simple jackhmmer functionality tree | commitdiff
2019-07-01 Ben SoaresJAL-3333 removed unused variable tree | commitdiff
2019-07-01 Ben SoaresJAL-3333 using floats for smoother weighting tree | commitdiff
2019-06-29 Ben SoaresJAL-3333 Sorry couldn't resist adding a bit of weightin... tree | commitdiff
2019-06-29 Ben SoaresJAL-3333 Title text now appears instantly. Altering... tree | commitdiff
2019-06-28 Ben SoaresMerge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn... tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 changed RGB model. Tested in mojave and Windo... tree | commitdiff
2019-06-28 tvaJAL-2629 add ability to add background frequencies... tree | commitdiff
2019-06-28 Jim ProcterMerge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn... tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 Smooth rotation of image now too tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 added height to rotating image preferred size tree | commitdiff
2019-06-28 Jim ProcterJAL-3330 apply Ensembl feature settings when showing... bug/JAL-3330_backpropagateEnsemblFeatureColours tree | commitdiff
2019-06-28 Ben SoaresJAL-3333 Replaced title text rendered in animated image... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating view after fetch... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 merge styles onto originating views when show... tree | commitdiff
2019-06-24 Jim ProcterJAL-3330 mergeFeatureStyles - needs test coverage tree | commitdiff
2019-06-18 Jim ProcterMerge branch 'bug/JAL-3286duplicatePdbQuery' into develop tree | commitdiff
2019-06-18 gmungocJAL-3304 option to export linked features in Jalview... tree | commitdiff
2019-06-18 gmungocJAL-3187 i18n show linked features checkboxes tree | commitdiff
2019-06-18 gmungocJAL-3305 mirror popup menu column selections in split... tree | commitdiff
2019-06-17 gmungocJAL-2792 JAL-3187 linked features (if shown) in Feature... tree | commitdiff
2019-06-17 gmungocJAL-3187 add sequence to feature details table (and... tree | commitdiff
2019-06-17 Jim ProcterJAL-3311 remove menus and documentation relating to... tasks/JAL-3311_removeVamsasMenu tree | commitdiff
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from... tree | commitdiff
2019-06-11 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus tree | commitdiff
2019-06-07 gmungocJAL-3187 change fields to local variables tree | commitdiff
2019-06-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into... tree | commitdiff
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom... tree | commitdiff
2019-06-06 tvaJAL-3285 build Jalview XML file for current version tree | commitdiff
2019-06-06 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into... tree | commitdiff
2019-06-06 gmungocJAL-3187 deletions (of Castor code) after merge from... tree | commitdiff
2019-06-06 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid... bug/JAL-3288splitFrameMenusJava11 tree | commitdiff
2019-06-05 tvaJAL-3285 method call change in SeqPanel to match develop tree | commitdiff
2019-06-05 tvaJAL-3285 code changes to AnnotationLabels not included... tree | commitdiff
2019-06-05 tvaJAL-3285 add unmerged features to AlignViewport tree | commitdiff
2019-06-04 Jim ProcterMerge branch 'develop' into developtomchmmer tree | commitdiff
2019-06-04 gmungocJAL-2386 avoid duplicate pdbids in free text query bug/JAL-3286duplicatePdbQuery tree | commitdiff
2019-05-28 Ben SoaresJAL-1988 Some TEST code accidentally left in now remove... tree | commitdiff
2019-05-27 Ben SoaresJAL-3141 Added HashMap types for Java 1.8 compatibility tree | commitdiff
2019-05-27 Ben SoaresMerge branch 'task/JAL-3247_JAL-3246_JAL-3254_JAL-3236_... tree | commitdiff
2019-05-27 Ben SoaresJAL-3141 Generified the JvUtils.buildComboWithTooltips... tree | commitdiff
2019-05-25 Ben SoaresJAL-3141 Added tooltips on Schemes dropdown and Customi... tree | commitdiff
2019-05-24 Ben SoaresJAL-3141 Reworked a lot of BackupFiles to allow the... tree | commitdiff
2019-05-22 Ben SoaresMerge branch 'bug/JAL-3141_backupfiles_prefs_widget_dis... tree | commitdiff
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