git://source.jalview.org
/
jalview.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
JAL-966 SearchResultsI now on viewmodels.AlignmentViewport rather than on SeqCanvas
[jalview.git]
/
src
/
jalview
/
gui
/
2016-05-31
gmungoc
JAL-1011 JAL-1989 don't mirror column-only selections...
tree
|
commitdiff
2016-05-30
Jim Procter
JAL-553 JAL-1557 always send selections after triggerin...
tree
|
commitdiff
2016-05-30
Jim Procter
JAL-1557 allow group associated rows to be used to...
tree
|
commitdiff
2016-05-30
Jim Procter
JAL-2077 fix: convenience method and checks for CMD...
tree
|
commitdiff
2016-05-30
Jim Procter
Merge branch 'develop' into efficiency/JAL-2034_JAL...
tree
|
commitdiff
2016-05-30
Jim Procter
JAL-1552 fix JAL-2122 resolve File->string before addin...
tree
|
commitdiff
2016-05-27
gmungoc
JAL-1989 tightened up use of flag for 'column selection...
tree
|
commitdiff
2016-05-27
gmungoc
JAL-1911 use existing object when setting 'Prompt each...
tree
|
commitdiff
2016-05-27
tcofoegbu
merge
tree
|
commitdiff
2016-05-27
tcofoegbu
JAL-1823 improvement to all chain code specification...
tree
|
commitdiff
2016-05-27
tcofoegbu
JAL-1911 further improvement to bugfix - do not save...
tree
|
commitdiff
2016-05-27
gmungoc
JAL-1942 small tidy (formatting, explict imports, typed...
tree
|
commitdiff
2016-05-26
tcofoegbu
JAL-1911 improvement to bugfix - do not save i18n text...
tree
|
commitdiff
2016-05-26
gmungoc
JAL-391 add reverse / complement to command history...
tree
|
commitdiff
2016-05-26
Jim Procter
Merge branch 'develop' of source.jalview.org/git/jalvie...
tree
|
commitdiff
2016-05-26
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2016-05-26
Jim Procter
JAL-1552 refactor shared dataflavor hander
tree
|
commitdiff
2016-05-26
gmungoc
JAL-1993 open sequence fetcher tree on 'fetch sequences'
tree
|
commitdiff
2016-05-26
Jim Procter
JAL-1552 extra debug logging for dataflavor if drop...
tree
|
commitdiff
2016-05-26
tcofoegbu
merge
tree
|
commitdiff
2016-05-26
tcofoegbu
JAL-1911 bugfix - do not save i18n text in preference...
tree
|
commitdiff
2016-05-25
Jim Procter
JAL-1522 patch - try to pick best text dataflavor
tree
|
commitdiff
2016-05-20
gmungoc
JAL-2110 unit tests for and minor refactoring of CrossRef
tree
|
commitdiff
2016-05-13
gmungoc
JAL-2105 capture Ensembl data version, check REST versi...
tree
|
commitdiff
2016-05-10
gmungoc
Merge branch 'develop' into features/JAL-1956_featureStyles
tree
|
commitdiff
2016-05-09
gmungoc
JAL-2018 export graduated feature colours correctly
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 JAL-2099 unused variables
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 JAL-2099 reuse refactored scale code for wrappe...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from renderin...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from renderin...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from renderin...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-2100 centre triangles on hidden column vertical...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-2100 optimisation
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-2100 triangles shown below in jvdesktop unwrapped...
tree
|
commitdiff
2016-05-06
Jim Procter
JAL-192 patch off-by-one for pathological gap case
tree
|
commitdiff
2016-05-05
Jim Procter
JAL-192 patch for off-by one and pathological case...
tree
|
commitdiff
2016-05-04
gmungoc
JAL-2092 hide columns with/without feature
tree
|
commitdiff
2016-05-03
gmungoc
JAL-2050 hide introns also when fetching Ensembl xrefs...
tree
|
commitdiff
2016-05-03
gmungoc
JAL-2068 minimised jalview.gui imports, test for remove...
tree
|
commitdiff
2016-05-02
gmungoc
JAL-1812 bind Groovy to Jalview rather than Desktop...
tree
|
commitdiff
2016-04-29
tcofoegbu
merge
tree
|
commitdiff
2016-04-29
gmungoc
JAL-2051 better checking of retrieved / duplicated...
tree
|
commitdiff
2016-04-29
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
|
commitdiff
2016-04-29
Jim Procter
JAL-192 need visible and actual sequence limits for...
tree
|
commitdiff
2016-04-29
Jim Procter
JAL-192 fix bounds when no hidden regions, and when...
tree
|
commitdiff
2016-04-29
Jim Procter
JAL-192 scale origin relative to start of reference...
tree
|
commitdiff
2016-04-29
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
|
commitdiff
2016-04-28
gmungoc
JAL-2083 removed use of reflection for Groovy
tree
|
commitdiff
2016-04-27
Jim Procter
JAL-192 fix off-by-one for alignment ruler with no...
tree
|
commitdiff
2016-04-27
Jim Procter
JAL-192 show reference sequence position and residue...
tree
|
commitdiff
2016-04-27
Jim Procter
JAL-1366 JAL-2086 reinstate bolding of reference sequence
tree
|
commitdiff
2016-04-27
tcofoegbu
re-enabled new uniprot sequence fetcher on spike branch
tree
|
commitdiff
2016-04-26
tcofoegbu
merge
tree
|
commitdiff
2016-04-26
tcofoegbu
JAL-1563 reverted to old uniprot fetcher to enable...
tree
|
commitdiff
2016-04-26
Jim Procter
JAL-2077 reinstate JAL-1554 fix for left-then-right...
tree
|
commitdiff
2016-04-26
Jim Procter
JAL-2077 reinstate annotation label popup by handling...
tree
|
commitdiff
2016-04-26
gmungoc
JAL-2068 deleting user-defined annotation removes the...
tree
|
commitdiff
2016-04-26
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
|
commitdiff
2016-04-25
tcofoegbu
develop merge
tree
|
commitdiff
2016-04-25
gmungoc
JAL-1812 JAL-2068 only allow one Groovy console open...
tree
|
commitdiff
2016-04-24
Jim Procter
JAL-1551 JAL-2077 formatting
tree
|
commitdiff
2016-04-24
Jim Procter
JAL-2077 - reinstate popups on osx
tree
|
commitdiff
2016-04-24
Jim Procter
JAL-2075 make GroovyConsole a singleton so tests requir...
tree
|
commitdiff
2016-04-22
tcofoegbu
JAL-2071 further refactoring, optimisation, and house...
tree
|
commitdiff
2016-04-22
gmungoc
JAL-1812 JAL-2068 add Run Groovy Script to AlignFrame...
tree
|
commitdiff
2016-04-20
Jim Procter
fix for JAL-2072
tree
|
commitdiff
2016-04-19
tcofoegbu
JAL-2071 architectural improvement for Plugable Free...
tree
|
commitdiff
2016-04-14
gmungoc
JAL-1421 typed map / lists, explicit imports, method...
tree
|
commitdiff
2016-04-14
gmungoc
JAL-1421 type parameter added to some collections
tree
|
commitdiff
2016-04-12
gmungoc
JAL-2050 only hide introns if exons are present! Remove...
tree
|
commitdiff
2016-04-11
gmungoc
JAL-2051 fetch Ensembl Gene accessions one at a time
tree
|
commitdiff
2016-04-11
tcofoegbu
merge
tree
|
commitdiff
2016-04-11
tcofoegbu
JAL-2054 Renamed getStartEnd in AlignFrame to getVisibl...
tree
|
commitdiff
2016-04-11
gmungoc
JAL-1705 (new preference option to) hide introns when...
tree
|
commitdiff
2016-04-11
Jim Procter
Merge branch 'develop' into efficiency/JAL-2034_JAL...
tree
|
commitdiff
2016-04-08
Jim Procter
Merge branch 'feature/JAL-2050_intronhidden' into develop
tree
|
commitdiff
2016-04-08
Jim Procter
JAL-2053 fix erratic hidden column marker display
tree
|
commitdiff
2016-04-07
Jim Procter
JAL-1722 fix: don’t draw visible regions outside viewpo...
tree
|
commitdiff
2016-04-06
tcofoegbu
merge
tree
|
commitdiff
2016-04-06
tcofoegbu
JAL-1960 updated test to capture new behaviour improvement
tree
|
commitdiff
2016-04-04
Jim Procter
JAL-2001 TODO for new ColumnSelection API
tree
|
commitdiff
2016-04-04
Jim Procter
JAL-969 refactor columnselection operation (during...
tree
|
commitdiff
2016-04-01
gmungoc
JAL-1705 ensure the right mapping is used to align...
tree
|
commitdiff
2016-04-01
gmungoc
Merge branch 'develop' into features/JAL-653_JAL-1766_h...
tree
|
commitdiff
2016-04-01
gmungoc
JAL-1705 reworked AlignmentUtils.makeCdsAlignment and...
tree
|
commitdiff
2016-04-01
tcofoegbu
JAL-2045 JAL-2047 improvement for sorting PDB quality...
tree
|
commitdiff
2016-03-30
tcofoegbu
JAL-1668 further clean-up of popup menu and NPE check...
tree
|
commitdiff
2016-03-28
tcofoegbu
merge
tree
|
commitdiff
2016-03-28
tcofoegbu
JAL-1668 removed redundant UI elements in PopupMenu...
tree
|
commitdiff
2016-03-28
gmungoc
JAL-2016 push getFeatureColourScheme(source) into Seque...
tree
|
commitdiff
2016-03-28
gmungoc
JAL-2036 update AlignFrame menus when dbreffetcher...
tree
|
commitdiff
2016-03-25
Jim Procter
JAL-2034 notes on efficiency
tree
|
commitdiff
2016-03-25
Jim Procter
JAL-2034 break out of redraw loop early if another...
tree
|
commitdiff
2016-03-25
Jim Procter
JAL-2034 disable overview updates when extent of a...
tree
|
commitdiff
2016-03-25
Jim Procter
JAL-2034 make Escape/select/deselect operations not...
tree
|
commitdiff
2016-03-25
Jim Procter
JAL-2034 flag for triggering redraw of overview window...
tree
|
commitdiff
2016-03-24
gmungoc
JAL-1705 removed experimental 'highlight selection...
tree
|
commitdiff
2016-03-23
tcofoegbu
JAL-2009 added programmatic custom feature setting...
tree
|
commitdiff
2016-03-22
tcofoegbu
resolve conflict with Mungo's merge
tree
|
commitdiff
next