source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	2993	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	182092	AlignFrame.java	blob \| history \| raw
-rw-r--r--	33827	AlignViewport.java	blob \| history \| raw
-rw-r--r--	48505	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	18567	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13976	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26123	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8775	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32810	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24448	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	10054	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	30601	AppJmol.java	blob \| history \| raw
-rw-r--r--	5031	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19366	AppVarna.java	blob \| history \| raw
-rw-r--r--	13967	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2760	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23289	BlogReader.java	blob \| history \| raw
-rw-r--r--	33402	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16952	Console.java	blob \| history \| raw
-rw-r--r--	5981	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	10573	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22982	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	89056	Desktop.java	blob \| history \| raw
-rw-r--r--	4210	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2808	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15973	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	13195	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	51191	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10095	Finder.java	blob \| history \| raw
-rwxr-xr-x	9386	FontChooser.java	blob \| history \| raw
-rw-r--r--	4171	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	2779	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11770	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12894	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3954	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	15343	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	168799	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15399	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	3508	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4237	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8378	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2614	OOMWarning.java	blob \| history \| raw
-rw-r--r--	24151	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11319	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	20141	PCAPanel.java	blob \| history \| raw
-rw-r--r--	9505	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3988	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	72802	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	32892	Preferences.java	blob \| history \| raw
-rw-r--r--	6965	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6319	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7954	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15659	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	17216	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4165	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	13288	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23187	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	49237	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26027	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13935	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8447	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	21572	SplitFrame.java	blob \| history \| raw
-rw-r--r--	34259	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6243	StructureViewer.java	blob \| history \| raw
-rw-r--r--	13266	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5994	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	25287	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23377	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26974	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5325	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35325	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8289	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	22009	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43166	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9969	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17571	WsPreferences.java	blob \| history \| raw