git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Merge branch 'r291_docs' into develop
[jalview.git] / src / jalview / gui /
2016-06-08 tcofoegbuJAL-1479 JAL- Fix to eradicate duplicate mapping output... tree | commitdiff
2016-06-06 tcofoegbuJAL-1919, JAL-1960 fix to disable refetching dbrefs... tree | commitdiff
2016-06-06 tcofoegbuJAL-1944 bugfix for wrong alignment numbering when... tree | commitdiff
2016-06-02 gmungocJAL-1424 corrected typos in message text keys tree | commitdiff
2016-06-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-06-01 tcofoegbuJAL-1944 updated bugfix implementation tree | commitdiff
2016-06-01 gmungocJAL-1424 utility to check resource bundle labels used... tree | commitdiff
2016-05-31 tcofoegbumerge tree | commitdiff
2016-05-31 tcofoegbuJAL-1944 fix for visible seqs sometimes been replaced... tree | commitdiff
2016-05-31 gmungocJAL-2023 adjustments to mappings added for split frame... tree | commitdiff
2016-05-31 Jim ProcterMerge branch 'jims/291patches' into develop tree | commitdiff
2016-05-31 gmungocJAL-1011 JAL-1989 don't mirror column-only selections... tree | commitdiff
2016-05-30 Jim ProcterJAL-553 JAL-1557 always send selections after triggerin... tree | commitdiff
2016-05-30 Jim ProcterJAL-1557 allow group associated rows to be used to... tree | commitdiff
2016-05-30 Jim ProcterJAL-2077 fix: convenience method and checks for CMD... tree | commitdiff
2016-05-30 Jim ProcterJAL-1552 fix JAL-2122 resolve File->string before addin... tree | commitdiff
2016-05-27 gmungocJAL-1989 tightened up use of flag for 'column selection... tree | commitdiff
2016-05-27 gmungocJAL-1911 use existing object when setting 'Prompt each... tree | commitdiff
2016-05-27 tcofoegbumerge tree | commitdiff
2016-05-27 tcofoegbuJAL-1823 improvement to all chain code specification... tree | commitdiff
2016-05-27 tcofoegbuJAL-1911 further improvement to bugfix - do not save... tree | commitdiff
2016-05-27 gmungocJAL-1942 small tidy (formatting, explict imports, typed... tree | commitdiff
2016-05-26 tcofoegbuJAL-1911 improvement to bugfix - do not save i18n text... tree | commitdiff
2016-05-26 gmungocJAL-391 add reverse / complement to command history... tree | commitdiff
2016-05-26 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... tree | commitdiff
2016-05-26 Jim ProcterJAL-1551 formatting tree | commitdiff
2016-05-26 Jim ProcterJAL-1552 refactor shared dataflavor hander tree | commitdiff
2016-05-26 gmungocJAL-1993 open sequence fetcher tree on 'fetch sequences' tree | commitdiff
2016-05-26 Jim ProcterJAL-1552 extra debug logging for dataflavor if drop... tree | commitdiff
2016-05-26 tcofoegbumerge tree | commitdiff
2016-05-26 tcofoegbuJAL-1911 bugfix - do not save i18n text in preference... tree | commitdiff
2016-05-25 Jim ProcterJAL-1522 patch - try to pick best text dataflavor tree | commitdiff
2016-05-13 gmungocJAL-2105 capture Ensembl data version, check REST versi... tree | commitdiff
2016-05-09 gmungocJAL-2018 export graduated feature colours correctly tree | commitdiff
2016-05-06 Jim ProcterJAL-192 JAL-2099 unused variables tree | commitdiff
2016-05-06 Jim ProcterJAL-1551 formatting tree | commitdiff
2016-05-06 Jim ProcterJAL-192 JAL-2099 reuse refactored scale code for wrappe... tree | commitdiff
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from renderin... tree | commitdiff
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from renderin... tree | commitdiff
2016-05-06 Jim ProcterJAL-192 JAL-2099 factored out calculation from renderin... tree | commitdiff
2016-05-06 Jim ProcterJAL-2100 centre triangles on hidden column vertical... tree | commitdiff
2016-05-06 Jim ProcterJAL-2100 optimisation tree | commitdiff
2016-05-06 Jim ProcterJAL-2100 triangles shown below in jvdesktop unwrapped... tree | commitdiff
2016-05-06 Jim ProcterJAL-192 patch off-by-one for pathological gap case tree | commitdiff
2016-05-05 Jim ProcterJAL-192 patch for off-by one and pathological case... tree | commitdiff
2016-05-04 gmungocJAL-2092 hide columns with/without feature tree | commitdiff
2016-05-03 gmungocJAL-2050 hide introns also when fetching Ensembl xrefs... tree | commitdiff
2016-04-29 tcofoegbumerge tree | commitdiff
2016-04-29 gmungocJAL-2051 better checking of retrieved / duplicated... tree | commitdiff
2016-04-29 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-04-29 Jim ProcterJAL-192 need visible and actual sequence limits for... tree | commitdiff
2016-04-29 Jim ProcterJAL-192 fix bounds when no hidden regions, and when... tree | commitdiff
2016-04-29 Jim ProcterJAL-192 scale origin relative to start of reference... tree | commitdiff
2016-04-29 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-04-28 gmungocJAL-2083 removed use of reflection for Groovy tree | commitdiff
2016-04-27 Jim ProcterJAL-192 fix off-by-one for alignment ruler with no... tree | commitdiff
2016-04-27 Jim ProcterJAL-192 show reference sequence position and residue... tree | commitdiff
2016-04-27 Jim ProcterJAL-1366 JAL-2086 reinstate bolding of reference sequence tree | commitdiff
2016-04-27 tcofoegbure-enabled new uniprot sequence fetcher on spike branch tree | commitdiff
2016-04-26 tcofoegbumerge tree | commitdiff
2016-04-26 tcofoegbuJAL-1563 reverted to old uniprot fetcher to enable... tree | commitdiff
2016-04-26 Jim ProcterJAL-2077 reinstate JAL-1554 fix for left-then-right... tree | commitdiff
2016-04-26 Jim ProcterJAL-2077 reinstate annotation label popup by handling... tree | commitdiff
2016-04-26 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-04-25 tcofoegbudevelop merge tree | commitdiff
2016-04-25 gmungocJAL-1812 JAL-2068 only allow one Groovy console open... tree | commitdiff
2016-04-24 Jim ProcterJAL-1551 JAL-2077 formatting tree | commitdiff
2016-04-24 Jim ProcterJAL-2077 - reinstate popups on osx tree | commitdiff
2016-04-24 Jim ProcterJAL-2075 make GroovyConsole a singleton so tests requir... tree | commitdiff
2016-04-22 tcofoegbuJAL-2071 further refactoring, optimisation, and house... tree | commitdiff
2016-04-22 gmungocJAL-1812 JAL-2068 add Run Groovy Script to AlignFrame... tree | commitdiff
2016-04-20 Jim Procterfix for JAL-2072 tree | commitdiff
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free... tree | commitdiff
2016-04-14 gmungocJAL-1421 typed map / lists, explicit imports, method... tree | commitdiff
2016-04-14 gmungocJAL-1421 type parameter added to some collections tree | commitdiff
2016-04-12 gmungocJAL-2050 only hide introns if exons are present! Remove... tree | commitdiff
2016-04-11 gmungocJAL-2051 fetch Ensembl Gene accessions one at a time tree | commitdiff
2016-04-11 tcofoegbumerge tree | commitdiff
2016-04-11 tcofoegbuJAL-2054 Renamed getStartEnd in AlignFrame to getVisibl... tree | commitdiff
2016-04-11 gmungocJAL-1705 (new preference option to) hide introns when... tree | commitdiff
2016-04-08 Jim ProcterMerge branch 'feature/JAL-2050_intronhidden' into develop tree | commitdiff
2016-04-08 Jim ProcterJAL-2053 fix erratic hidden column marker display tree | commitdiff
2016-04-07 Jim ProcterJAL-1722 fix: don’t draw visible regions outside viewpo... tree | commitdiff
2016-04-06 tcofoegbumerge tree | commitdiff
2016-04-06 tcofoegbuJAL-1960 updated test to capture new behaviour improvement tree | commitdiff
2016-04-04 Jim ProcterJAL-2001 TODO for new ColumnSelection API tree | commitdiff
2016-04-04 Jim ProcterJAL-969 refactor columnselection operation (during... tree | commitdiff
2016-04-01 gmungocJAL-1705 ensure the right mapping is used to align... tree | commitdiff
2016-04-01 gmungocMerge branch 'develop' into features/JAL-653_JAL-1766_h... tree | commitdiff
2016-04-01 gmungocJAL-1705 reworked AlignmentUtils.makeCdsAlignment and... tree | commitdiff
2016-04-01 tcofoegbuJAL-2045 JAL-2047 improvement for sorting PDB quality... tree | commitdiff
2016-03-30 tcofoegbuJAL-1668 further clean-up of popup menu and NPE check... tree | commitdiff
2016-03-28 tcofoegbumerge tree | commitdiff
2016-03-28 tcofoegbuJAL-1668 removed redundant UI elements in PopupMenu... tree | commitdiff
2016-03-28 gmungocJAL-2016 push getFeatureColourScheme(source) into Seque... tree | commitdiff
2016-03-28 gmungocJAL-2036 update AlignFrame menus when dbreffetcher... tree | commitdiff
2016-03-24 gmungocJAL-1705 removed experimental 'highlight selection... tree | commitdiff
2016-03-23 tcofoegbuJAL-2009 added programmatic custom feature setting... tree | commitdiff
2016-03-22 tcofoegburesolve conflict with Mungo's merge tree | commitdiff
2016-03-22 tcofoegbuJAL-1919 code improvement to make PDB sequence fetcher... tree | commitdiff
next