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JAL-2754 Sequence.findFeatures(fromCol, toCol)
[jalview.git] / src / jalview / gui /
2017-05-02 gmungocJAL-2447 EXPERIMENTAL preference (option in Tools menu) features/JAL-2447experimentalFlag tree | commitdiff
2017-05-02 gmungocJAL-2499 inlined two 1-line methods tree | commitdiff
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside... tree | commitdiff
2017-05-02 kiramtJAL-2491 first addition of new event tree | commitdiff
2017-05-01 tcofoegbuJAL-2465 missed commit for refactore renaming of getPdb... tree | commitdiff
2017-05-01 tcofoegbuJAL-2465 bugfix and rerefactor renamed getPdbFile(... tree | commitdiff
2017-05-01 tcofoegbuJAL-2376 copied out patch from Phyre branch tree | commitdiff
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 use constant for preference token tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA... tree | commitdiff
2017-04-27 Jim ProcterJAL-2432 desktop: filter/select columns by threshold... tree | commitdiff
2017-04-27 gmungocJAL-2492 use SequenceFeatures.getNonPositionalFeatures() tree | commitdiff
2017-04-26 kiramtMerge remote-tracking branch 'origin/features/JAL-2388h... tree | commitdiff
2017-04-26 kiramtJAL-2388 last separation of hidden columns/col selection tree | commitdiff
2017-04-26 kiramtJAL-2388 Tidies and unit tests tree | commitdiff
2017-04-25 kiramtJAL-2388 Reverted and re-did applet changes tree | commitdiff
2017-04-25 kiramtJAL-2388 Tidies and other corrections so applet compiles tree | commitdiff
2017-04-25 kiramtJAL-2388 And corrected OverviewCanvas for applet tree | commitdiff
2017-04-25 kiramtJAL-2388 Updated applet to show/hide hidden regions... tree | commitdiff
2017-04-25 kiramtJAL-2388 Working hidden regions hide/show in desktop tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-04-24 kiramtJAL-2388 Finished split of hidden columns and selected... tree | commitdiff
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped... tree | commitdiff
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row... tree | commitdiff
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... tree | commitdiff
2017-04-21 gmungocJAL-2423 tweak tree panel title, add Spanish text tree | commitdiff
2017-04-21 kiramtJAL-2388 Tidies tree | commitdiff
2017-04-21 kiramtJAL-2388 Alignment col and row collections with iterators tree | commitdiff
2017-04-19 gmungocJAL-2435 mirror font changes with middle mouse drag tree | commitdiff
2017-04-19 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-04-19 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-04-19 gmungocJAL-2483 use SequenceFeatures to look up groups, types... tree | commitdiff
2017-04-18 gmungocJAL-2480 SequenceFeaturesI encapsulates features api tree | commitdiff
2017-04-17 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-04-12 gmungocJAL-1632 removed check for aligned sequences for Tree... tree | commitdiff
2017-04-12 gmungocJAL-1632 remove unused check for sequences aligned tree | commitdiff
2017-04-12 gmungocJAL-1632 one PCA/Tree per panel, closed when panel... tree | commitdiff
2017-04-11 tcofoegbuPull from develop features/JAL-2473_set-minimium-dimensions tree | commitdiff
2017-04-11 tcofoegbuJAL-2473 removed unused fields in JalviewDialog tree | commitdiff
2017-04-11 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... tree | commitdiff
2017-04-10 tcofoegbuJAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux tree | commitdiff
2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher... tree | commitdiff
2017-04-10 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom... tree | commitdiff
2017-04-10 gmungocJAL-2361 option to save on OK of changed named colour... tree | commitdiff
2017-04-07 gmungocJAL-2393 code tidying for review comments tree | commitdiff
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-06 gmungocJAL-2361 make a modified saved scheme the backout check... tree | commitdiff
2017-04-05 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-04-05 gmungocJAL-2361 simplify constructors, select unsaved but... tree | commitdiff
2017-04-05 gmungocJAL-2361 apply any saved changes to current colour... tree | commitdiff
2017-04-04 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314 tree | commitdiff
2017-04-03 gmungocJAL-2435 further adjustments to behaviour in split... tree | commitdiff
2017-04-03 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-03-31 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-03-31 gmungocMerge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView tree | commitdiff
2017-03-31 gmungocJAL-2435 tidy code tree | commitdiff
2017-03-31 gmungocJAL-2435 slightly more sensible behaviour changing... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-03-30 gmungocJAL-1608 leave Create Group, Remove Group menu items... tree | commitdiff
2017-03-30 gmungocJAL-2401 code and help tidy for review comments tree | commitdiff
2017-03-30 gmungocJAL-2401 don't apply lower case colour to upper case tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice tree | commitdiff
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups tree | commitdiff
2017-03-29 kiramtJAL-2388 New rendering code, extensions to support... tree | commitdiff
2017-03-27 gmungocJAL-2416 tooltip with descriptions for score models... tree | commitdiff
2017-03-27 gmungocJAL-2416 add score model description field for tooltip... tree | commitdiff
2017-03-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin... tree | commitdiff
2017-03-24 Jim ProcterJAL-2360 fix applet build by separating castor XML... tree | commitdiff
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text... tree | commitdiff
2017-03-24 gmungocJAL-1632 named parameters tree | commitdiff
2017-03-24 kiramtJAL-2388 Removing AlignmentPanel dependency (mostly) tree | commitdiff
2017-03-24 kiramtJAL-2314 Tidy up tree | commitdiff
2017-03-24 gmungocJAL-2464 fix cancel tree print behaviour tree | commitdiff
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca... tree | commitdiff
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues tree | commitdiff
2017-03-23 gmungocJAL-1632 suppress PID parameter options in Tree/PCA... tree | commitdiff
2017-03-23 gmungocJAL-2464 fix cancel tree print behaviour tree | commitdiff
2017-03-23 kiramtJAL-2314 Tidies tree | commitdiff
2017-03-23 kiramtJAL-2388 Factored out applet overview canvas, threading... tree | commitdiff
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-22 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-03-22 kiramtJAL-2388 Rationalised overview panel drawing thread tree | commitdiff
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-03-22 kiramtJAL-2388 Reinstated original overview checks for annota... tree | commitdiff
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-03-22 kiramtJAL-2388 Minor changes to thread flags tree | commitdiff
2017-03-21 kiramtJAL-2388 Unpleasant but operational refactor into Overv... tree | commitdiff
2017-03-21 kiramtJAL-2388 Made ViewportRanges final tree | commitdiff
2017-03-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-653_JAL-1766_htslib_refseqsupport tree | commitdiff
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