JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE
[jalview.git] / src / jalview / io /
2019-02-04 hansonradds protype size to JTextArea hack for nonexistent...
2019-02-04 hansonrfixing array processing order
2019-02-01 Ben SoaresJAL-3141 Slight efficiency gain in detecting backupfile...
2019-01-30 Ben SoaresJAL-3141 Enabled the 'Include backpup files' checkbox...
2019-01-29 hansonrJSON writing fix, JColorChooser (mnemonic change) fix
2019-01-29 Ben SoaresJAL-3141 Found a good fix for updating the FileChooser...
2019-01-29 Ben SoaresJAL-3141 Found a (not ideal) fix for updating the FileC...
2019-01-28 Ben SoaresJAL-3141 improvement on BackupFilenameParts filename...
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -...
2019-01-25 Ben SoaresJAL-3141. This adds quite a lot of code to allow an...
2019-01-25 hansonrJSON refactoring
2019-01-25 gmungocJAL-3187 don't compute variant features on peptide...
2019-01-24 Ben SoaresJAL-3141 New layout and wording of Backups Preferences...
2019-01-24 Ben SoaresJAL-3141 Reformatted code in eclipse
2019-01-23 Ben SoaresJAL-3141 Added Presets options in the Backups Preferenc...
2019-01-22 Ben SoaresJAL-3141 Fixed what happens when suffix template has...
2019-01-21 hansonrisAMac() -> isAMacAndNotJS(), isWindows() -> isWindowsA...
2019-01-20 Ben SoaresJAL-3141 removing diagnostic output
2019-01-20 Ben SoaresJAL-3141 Changed suffix position to after the extension...
2019-01-18 Jim ProcterMerge branch 'feature/JAL-3063jaxbNoCastor' into featur...
2019-01-14 Ben SoaresJAL-3141 Made more constants
2019-01-09 Ben SoaresJAL-3141 removed redundant method to tests
2019-01-09 Ben SoaresJAL-3141 forgot to add this file after extracting the...
2019-01-09 Ben SoaresJAL-3141 Made one more suggested change from code review
2019-01-08 Ben SoaresJAL-3141 Made some more suggested changes from code...
2019-01-08 Ben SoaresJAL-3141 Made some suggested changes from code review
2018-12-21 gmungocJAL-3032 prefer Jalview.isJS() to j2sNative
2018-12-20 hansonrJalviewFileChooser back to original; synth. ref fixed...
2018-12-20 hansonrpreliminary hack fix for synthetic reference issue
2018-12-19 gmungocJAL-3178 include non-positional features in their group... bug/JAL-2791exportFilteredFeature
2018-12-18 gmungocJAL-3048 fix NPE in file chooser callbacks map
2018-12-18 gmungocJAL-3048 DialogRunnerI reduced to minimal implementation
2018-12-17 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into
2018-12-17 gmungocMerge branch 'feature/JAL-3169cancelOverwrite' into...
2018-12-17 gmungocJAL-3068 tidy status bar messaging
2018-12-17 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into
2018-12-13 hansonrSwingJS 3.2.4.05 should fix JFileChooser synthetic...
2018-12-13 Ben SoaresJAL-3130 Attempting to fix 8 tests that pass on a Mac...
2018-12-10 gmungocJAL-3048 wip externalise trigger from RunResponse
2018-12-10 gmungocMerge branch 'feature/JAL-3169cancelOverwrite' into
2018-12-10 gmungocJAL-1421 added type to List and Vector feature/JAL-3169cancelOverwrite
2018-12-10 gmungocJAL-3169 leave file browser open on Cancel in overwrite...
2018-12-10 gmungocJAL-3048 DialogRunner changes (wip)
2018-12-06 Ben SoaresJAL-3130 incorporating feature/JAL-3063jaxbNoCastor...
2018-12-06 gmungocJAL-3048 response() renamed addResponse(); checkstyle...
2018-12-03 gmungocJAL-3063 Castor removed from codebase
2018-11-15 gmungocJAL-3032 JAL-2344 project files are 'identifiable'
2018-11-14 gmungocJAL-3032 don't throw Exception to signal chain not...
2018-11-08 gmungocJAL-3048 override showOpenDialog with JalviewJS compati...
2018-11-06 hansonrJAXB marshalling by JavaScript successfully unmarshalle...
2018-11-02 Ben SoaresJAL-3141 Tests now available and working, bringing...
2018-11-02 hansonrMarshalling produces valid ZIP file. Unmarshalling...
2018-11-01 gmungocMerge branch 'Jalview-BH/JAL-3026' into
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn...
2018-10-31 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into... feature/JAL-3144noJTree
2018-10-29 gmungocJAL-3038 add ActionListener and FocusListener to SwingJ...
2018-10-25 Ben SoaresJAL-3141 Ostensibly all backups working for alignment...
2018-10-24 Ben SoaresJAL-3141 Code checkout. Not compiling.
2018-10-24 Ben SoaresJAL-3141 Code checkout. Not compiling.
2018-10-23 Ben SoaresBackupFilter and other unfinished business
2018-10-22 Ben SoaresJAL-3141 Taken the backing up code out of FileChooser...
2018-10-22 Ben SoaresJAL-3141 Taken the backing up code out of FileChooser...
2018-10-22 Ben SoaresJAL-3141 Tidying
2018-10-19 Ben SoaresJAL-3141 Backup files being created with default suffix...
2018-10-17 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into Jalview-BH...
2018-10-09 Jim ProcterJAL-3127 TODO - resolve reference to Viewport for group...
2018-10-04 gmungocJAL-3132 set status message when over sequence id or...
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi...
2018-09-19 gmungocJAL-3063 use JAXB for 'Save as Project' and load projec...
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
2018-09-09 Jim ProcterJAL-3106 normalise extension before checking if it...
2018-09-07 Jim ProcterJAL-2988 if selected file is null (On Java 10/OSX ...
2018-09-07 Jim ProcterJAL-2988 workaround: overload getSelectedFile() because...
2018-09-07 Jim ProcterJAL-3106 use .jvp as default
2018-09-03 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988...
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus
2018-08-24 hansonrJAL-3026 GD#107,128,130,139 build-site.xml
2018-08-22 Jim ProcterJAL-2988 workaround for jalview save as dialogs - clear...
2018-08-21 hansonrmc_view references were MCview
2018-08-17 gmungocJAL-3038 unit test updates for JalviewJS workaround...
2018-08-16 gmungocJAL-3038 workaround to replace editable combobox with...
2018-08-03 Ben SoaresJAL-3061
2018-08-02 Ben SoaresJAL-3053
2018-07-30 bsoaresFixed bug ignoring "alpha" extended braces in RNA SS...
2018-07-23 gmungocJAL-3056 suppress menu options, and repoint Help, for...
2018-07-23 gmungocJAL-3048 all image export (alignment, tree, PCA, Jmol...
2018-07-20 gmungocJAL-3048 JalviewJS compliant use of LineartOptions...
2018-07-20 gmungocJAL-3048 revised AlignExportSettings dialog with respon...
2018-07-17 gmungocJAL-3068 LineartOptions for EPS/HTML/SVG, new preferenc... task/JAL-3068lineartDialog
2018-07-11 Jim ProcterJAL-3048 refactored export settings to bean+dialog... Jalview-BH/JAL-3048_exportSettingsrefactor
2018-07-03 hansonrMerge remote-tracking branch 'origin/Jalview-BH/JAL...
2018-07-02 hansonrJAL-3026 File...Reload working
2018-07-02 Jim ProcterJAL-3048 remove TODOs Jalview-BH/JAL-3048_dialogs
2018-07-02 Jim ProcterJAL-3048 don’t execute dialog runner after dialog shown...
2018-07-02 Jim ProcterJAL-3048 AlignFrame -> Save dialog refactored - patched...
2018-06-29 Jim ProcterJAL-3048 refactored Desktop->File->Open to use jalview...
2018-06-28 Jim ProcterJAL-3048 TODOs for refactoring JalviewFileChooser pattern
2018-06-28 hansonrFileAsBytes
2018-06-28 hansonrJAL-3032 FileChooser missing correct call to JSToolkit...
2018-06-28 hansonrJAL-3032 DND enabled; additional io changes for File...
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