git://source.jalview.org
/
jalview.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
JAL-2634 Added null test for graphics in AnnotationPanel::fastPaint
[jalview.git]
/
src
/
jalview
/
io
/
2015-07-23
Jim Procter
JAL-1819 use Float.isNaN() to check for NaNs!
tree
|
commitdiff
2015-07-21
tcofoegbu
JAL-1443 bugfix to prevent loading of unidentifiable...
tree
|
commitdiff
2015-07-09
tcofoegbu
JAL-1806 bug fix to loop through the entire data file...
tree
|
commitdiff
2015-07-08
gmungoc
JAL-1759 merge from develop
tree
|
commitdiff
2015-07-02
tcofoegbu
JAL-1443 data validation for empty content before loadi...
tree
|
commitdiff
2015-07-01
tcofoegbu
house keeping
tree
|
commitdiff
2015-06-30
tcofoegbu
JAL-1641 round trip test/refactoring
tree
|
commitdiff
2015-06-30
Jim Procter
JAL-1682 JAL-1645 remove references to 2.8.3
tree
|
commitdiff
2015-06-28
Jim Procter
JAL-1421 todo: remove java.util.Vector from jalview...
tree
|
commitdiff
2015-06-26
Jim Procter
JAL-1705 - allow a FileParse to be constructed directly...
tree
|
commitdiff
2015-06-26
tcofoegbu
JAL-1641 fixed broken functionalities after refactor
tree
|
commitdiff
2015-06-25
Jim Procter
Merge branch 'develop' into features/JAL-653_JAL-1766_h...
tree
|
commitdiff
2015-06-25
Jim Procter
JAL-1780 JAL-653 JAL-1892 brackets in wrong place broke...
tree
|
commitdiff
2015-06-25
Jim Procter
Merge branch 'develop' into features/JAL-653_JAL-1766_h...
tree
|
commitdiff
2015-06-24
Jim Procter
JAL-653 JAL-1780 JAL-1892 fix jalviewLite compilation
tree
|
commitdiff
2015-06-23
Jim Procter
Merge branch 'merge/develop_JAL-1780_JAL-653_JAL-1892...
tree
|
commitdiff
2015-06-23
Jim Procter
JAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
tree
|
commitdiff
2015-06-22
Jim Procter
JAL-1780 JAL-653 Format/AppletFormat import and export...
tree
|
commitdiff
2015-06-19
Jim Procter
JAL-653 JAL-1780 refactor getGroups so HTMLfile/JSONfil...
tree
|
commitdiff
2015-06-19
Jim Procter
JAL-1780 JAL-653 organise imports
tree
|
commitdiff
2015-06-19
tcofoegbu
JAL-1270 JUnit to TestNG refactoring
tree
|
commitdiff
2015-06-18
Jim Procter
JAL-653 JAL-1780 JAL-1543 javadoc and comment about...
tree
|
commitdiff
2015-06-18
Jim Procter
JAL-1780 JAL-653 moved AlignExportSettings reference...
tree
|
commitdiff
2015-06-17
Jim Procter
JAL-1784 minimise data duplication, and report out...
tree
|
commitdiff
2015-06-17
Jim Procter
JAL-1784 refactor parse method to directly parse FilePa...
tree
|
commitdiff
2015-06-17
Jim Procter
Merge branch 'features/JAL-653_gffalignments' into...
tree
|
commitdiff
2015-06-17
Jim Procter
Merge branch 'features/JAL-653_gffalignments' into...
tree
|
commitdiff
2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-653_gffalignments
features/JAL-653_gffalignments
tree
|
commitdiff
2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-1780_export...
tree
|
commitdiff
2015-06-17
tcofoegbu
JAL-1780 more support for export setting for flatfile...
features/JAL-1780_export-settings_flatfile
tree
|
commitdiff
2015-06-15
Jim Procter
JAL-1775 FileLoader javadoc
tree
|
commitdiff
2015-06-15
Jim Procter
JAL-1775 fix regression from commit 70f9c4700f20a8fa57e...
tree
|
commitdiff
2015-06-15
tcofoegbu
JAL-1641 clean up
tree
|
commitdiff
2015-06-15
tcofoegbu
clean up
tree
|
commitdiff
2015-06-12
tcofoegbu
JAL-1641 refactor
tree
|
commitdiff
2015-06-11
Jim Procter
JAL-653 tidy comments
tree
|
commitdiff
2015-06-10
tcofoegbu
updated build.xml
tree
|
commitdiff
2015-06-10
tcofoegbu
JAL-1641 updated applet version
tree
|
commitdiff
2015-06-09
tcofoegbu
JAL-1488 bug-fix for incorrect start/end position in...
tree
|
commitdiff
2015-06-07
Jim Procter
JAL-429 remove pointless code from phylip parser
features/JAL-653_rebased_gffalignments
tree
|
commitdiff
2015-06-07
Jim Procter
JAL-653 GFF recognition for identifyFile and format...
tree
|
commitdiff
2015-06-07
Jim Procter
JAL-653 basic GFF3 alignment import wrapper class
tree
|
commitdiff
2015-06-06
Jim Procter
JAL-653 make sure dummy sequences created during GFF...
tree
|
commitdiff
2015-06-06
Jim Procter
JAL-653 first stab at parsing GFF3 pragmas to support...
tree
|
commitdiff
2015-06-06
Jim Procter
JAL-653 gff version number field
tree
|
commitdiff
2015-06-05
tcofoegbu
JAL-1760 JAL-1641 Serialisation of Hidden Seqs and...
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-653 set the warningMessage for the file source...
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-653 GFF attributes parsing mechanism, with first...
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-653 trim initial tab in sequence feature ATTRIBUTES
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-653 allow dummy sequences to be created if a sequen...
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2015-06-05
Jim Procter
JAL-653 JAL-966 TODO and avoid NPE when desktop instanc...
tree
|
commitdiff
2015-06-04
tcofoegbu
JAL-1756 bug-fix
tree
|
commitdiff
2015-06-04
tcofoegbu
JAL-1641 updated json schema to make it more generic...
tree
|
commitdiff
2015-06-02
tcofoegbu
JAL-1641 applet build fix
tree
|
commitdiff
2015-06-01
tcofoegbu
JAL-1641 remove all refs/imports from gui package
tree
|
commitdiff
2015-05-27
tcofoegbu
Merge branch 'features/JAL-1740_Decoup-BioJS' into...
tree
|
commitdiff
2015-05-27
tcofoegbu
JAL-1740 updated synch codes to use a git repo rather...
features/JAL-1740_Decoup-BioJS
tree
|
commitdiff
2015-05-25
tcofoegbu
build fix
tree
|
commitdiff
2015-05-21
tcofoegbu
JAL-1740 implemented auto-update of BioJsMSA, introduce...
features/JAL-1740_BioJsAutoUpdater
tree
|
commitdiff
2015-05-20
tcofoegbu
Merge branch 'features/JAL-1541_BioJsMSA' into develop
tree
|
commitdiff
2015-05-20
tcofoegbu
JAL-1541 minor code clean up, and added test for BioJsH...
tree
|
commitdiff
2015-05-19
tcofoegbu
Merge branch 'features/JAL-1541_BioJsMSA' into develop
tree
|
commitdiff
2015-05-19
tcofoegbu
JAL-1641 Further refactoring of JSON export option...
tree
|
commitdiff
2015-05-19
tcofoegbu
JAL-1541 Modified BioJs exporter to take advantage...
tree
|
commitdiff
2015-05-13
gmungoc
JAL-1712 fixes/tests for Castor binding of EMBL XML...
tree
|
commitdiff
2015-05-13
tcofoegbu
Fixed some broken tests
tree
|
commitdiff
2015-05-12
tcofoegbu
JAL_793 implemented embeding source data in exported...
tree
|
commitdiff
2015-05-12
tcofoegbu
Merge branch 'features/JAL-1641_JSON_' into develop
tree
|
commitdiff
2015-05-12
tcofoegbu
JAL_1641 added unit test and minor house keeping
tree
|
commitdiff
2015-05-11
tcofoegbu
Merge branch 'features/JAL-1641_JSON_' into develop
tree
|
commitdiff
2015-05-11
tcofoegbu
JAL-1641 cherry-picked changes into develop compatible...
tree
|
commitdiff
2015-05-09
unknown
JAL-1601 bugfix on previous commit
tree
|
commitdiff
2015-05-09
unknown
JAL-1601 patch burial display for prediction loaded...
tree
|
commitdiff
2015-05-07
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2015-05-07
Jim Procter
JAL-1601 migrated the JABAWS 2.1 jpred burial represent...
tree
|
commitdiff
2015-03-27
tcofoegbu
merge commit
tree
|
commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
|
commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
|
commitdiff
2015-03-06
Jim Procter
reassign features already created/documented for 2...
tree
|
commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
|
commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
|
commitdiff
2015-02-05
Charles Ofoegbu
merge commit
tree
|
commitdiff
2015-02-04
Charles Ofoegbu
JAL-1643 modified jalviewFileChooser to retain default...
tree
|
commitdiff
2015-02-04
Charles Ofoegbu
JAL-1643 Modified JalviewFileChooser to have a more...
tree
|
commitdiff
2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
tree
|
commitdiff
2015-01-23
Jim Procter
JAL-1551 formatting
tree
|
commitdiff
2015-01-23
Jim Procter
JAL-1286 don't print an exception if a non-gzip stream...
tree
|
commitdiff
2015-01-23
Jim Procter
JAL-1628 tweak signature of core annotation printer...
tree
|
commitdiff
2015-01-23
Jim Procter
JAL-1628 drop getShowAnnotation accessor in favour...
tree
|
commitdiff
2015-01-21
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
tree
|
commitdiff
2015-01-18
Jim Procter
JAL-1628 employ new AnnotationFile reader method to...
tree
|
commitdiff
2015-01-18
Jim Procter
JAL-1628 new entry point for reading annotation files...
tree
|
commitdiff
2015-01-18
Jim Procter
JAL-1628 formatting and javadoc
tree
|
commitdiff
2015-01-14
gmungoc
JAL-1629 .jar option removed from Alignment File Save...
tree
|
commitdiff
2015-01-07
Jim Procter
Merge branch 'develop' into JAL-1483_29dev
tree
|
commitdiff
2015-01-07
gmungoc
JAL-1588 refactoring to StructureViewerBase and related
tree
|
commitdiff
2014-12-22
Charles Ofoegbu
Patch to synchronize title svg and allignment svg scrolling
tree
|
commitdiff
2014-12-22
Jim Procter
Merge: 497958b 68dcaa7
tree
|
commitdiff
2014-12-15
Charles Ofoegbu
update HtmlSvgOutput to ignore browser invocation when...
tree
|
commitdiff
next