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JAL-3541 removed clover report generation debug flag (utf-8 encoding enforcement...
[jalview.git] / src / jalview / jbgui /
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside... tree | commitdiff
2017-05-01 tcofoegbuJAL-2376 copied out patch from Phyre branch tree | commitdiff
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy tree | commitdiff
2017-04-24 tcofoegbuJAL-1648 House keeping tree | commitdiff
2017-04-20 tcofoegbuJAL-1648 refactored and improved caching architecture... tree | commitdiff
2017-04-19 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-04-10 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-10 gmungocJAL-2361 option to save on OK of changed named colour... tree | commitdiff
2017-04-07 gmungocJAL-2393 code tidying for review comments tree | commitdiff
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-05 gmungocJAL-2361 apply any saved changes to current colour... tree | commitdiff
2017-04-03 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-04-03 tcofoegbuJAL-1648 Added improvement to persist cache items to... tree | commitdiff
2017-03-31 gmungocJAL-1608 unused method removed tree | commitdiff
2017-03-31 gmungocJAL-2435 slightly more sensible behaviour changing... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into features/JAL-2435splitScree... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups tree | commitdiff
2017-03-30 gmungocJAL-1608 leave Create Group, Remove Group menu items... tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour tree | commitdiff
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups tree | commitdiff
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-08 gmungocJAL-2435 copy font changes across split screen tree | commitdiff
2017-03-07 gmungocJAL-2295 status messages for Chimera attributes set... tree | commitdiff
2017-03-02 gmungocJAL-2295 tweak order and wording of Superpose menu... tree | commitdiff
2017-03-02 gmungocJAL-2295 make 'Jmol' menu appear; enable/disable Superp... tree | commitdiff
2017-02-27 gmungocJAL-1632 dialog to calculate either Tree or PCA tree | commitdiff
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy... tree | commitdiff
2017-02-17 gmungocJAL-2416 SeqSpace PCA now provided as an alternative... tree | commitdiff
2017-02-13 gmungocJAL-1632 first cut of Tree chooser dialog and ScoreMode... tree | commitdiff
2017-02-09 gmungocJAL-1608 menu entry text; enable/disable Create/Remove... tree | commitdiff
2017-02-09 Jim ProcterMerge branch 'develop' into features/JAL-2316 features/JAL-2316 tree | commitdiff
2017-02-09 gmungocJAL-2401 change 'Lower Case Colour' to checkbox with... tree | commitdiff
2017-02-08 gmungocJAL-2399 JAL-2400 tidy Text Colour wording, behaviour... tree | commitdiff
2017-02-08 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-02-07 Jim ProcterMerge branch 'features/JAL-2371collectionColourScheme... tree | commitdiff
2017-02-07 gmungocJAL-2401 Lower Case Colour toggleable, help text added tree | commitdiff
2017-01-26 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-01-23 gmungocJAL-2386 unit tests for change colour (and minor refact... tree | commitdiff
2017-01-20 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-19 gmungocJAL-2383 restore PID colour threshold from project... tree | commitdiff
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI... tree | commitdiff
2017-01-09 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2016-12-22 gmungocJAL-2360 structure viewers now using ColourMenuHelper... tree | commitdiff
2016-12-21 gmungocJAL-2360 ColourMenuHelper now builds and selects items... tree | commitdiff
2016-12-20 gmungocJAL-2360 ColourSchemes holds configured schemes, AlignF... tree | commitdiff
2016-12-19 gmungocJAL-2361 select colour menu item by matching its name... tree | commitdiff
2016-12-16 kiramtJAL-2316 Added database name column to URL links table... tree | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, tree | commitdiff
2016-12-13 kiramtMerge branch 'develop' into features/JAL-2316 tree | commitdiff
2016-12-13 gmungocJAL-2361 adding items to applet colour menus, TCoffee... tree | commitdiff
2016-12-12 gmungocJAL-2361 extract methods to (re-)build colour menu tree | commitdiff
2016-12-12 kiramtJAL-2316 Added GUI checks for duplicate link ids tree | commitdiff
2016-12-09 kiramtJAL-2316 Unit test updates and associated minor changes... tree | commitdiff
2016-12-09 kiramtJAL-2316 Unit testing, relax constraint that default... tree | commitdiff
2016-12-09 gmungocJAL-1895 suppress RNA interaction colour option tree | commitdiff
2016-12-07 kiramtJAL-2316 Restructure identifiers.org download tree | commitdiff
2016-12-05 kiramtJAL-2316 Added UrlProvider factories. Tidied up labelling. tree | commitdiff
2016-12-02 kiramtJAL-2316 GUI to allow to insert tokens into new URL... tree | commitdiff
2016-12-02 kiramtJAL-2316 GUI updates to Connections tab in Preferences... tree | commitdiff
2016-12-02 tcofoegbuJAL-1648 made further abstraction and createda new... tree | commitdiff
2016-12-01 tcofoegbuJAL-1648 Implemented in-memory caching for FTS (Uniprot... tree | commitdiff
2016-11-28 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-24 gmungocDistinguish text-only output formats and others (.jar... tree | commitdiff
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane tree | commitdiff
2016-11-24 gmungocFileFormatI further tweaks, clean compile tree | commitdiff
2016-11-22 Jim ProcterMerge branch 'features/JAL-1738_JAL-345_selectionfromhi... tree | commitdiff
2016-11-22 Jim ProcterJAL-1738 JAL-345 changed keystroke to ‘B’ (with modifie... tree | commitdiff
2016-11-07 gmungocJAL-2282 show url links that need checked; remove ... tree | commitdiff
2016-11-02 Jim ProcterJAL-345 JAL-1738 menu item, AlignFrame action listener... tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-24 kiramtFixed dialog box messages in English and Spanish. Adjus... tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
2016-10-05 Jim ProcterJAL-2189 source formatting tree | commitdiff
2016-09-29 gmungocJAL-2237 apply default filter as sort in initial search tree | commitdiff
2016-09-27 gmungocJAL-2231 save preferred scroll height _without_ progres... tree | commitdiff
2016-08-31 gmungocJAL-2077 test isPopupTrigger in mouseReleased or mouseC... tree | commitdiff
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum tree | commitdiff
2016-08-25 gmungocJAL-1854 missing case break statements added tree | commitdiff
2016-08-24 gmungocJAL-1355 correct 'thereshold' to 'threshold' in message... tree | commitdiff
2016-08-23 gmungocJAL-2176 unused field / methods removed tree | commitdiff
2016-07-11 gmungocfile format enum wip changes tree | commitdiff
2016-06-30 tcofoegbuJAL-2074 Improvement to StructureChooser and FTS interf... tree | commitdiff
2016-06-17 tcofoegbuJAL-1823 Updated tooltip to reflect how a specific... tree | commitdiff
2016-06-14 tcofoegbuJAL-2047 resolved structure chooser's displayed column... tree | commitdiff
2016-06-01 gmungocJAL-1424 utility to check resource bundle labels used... tree | commitdiff
2016-05-26 tcofoegbuJAL-1911 improvement to bugfix - do not save i18n text... tree | commitdiff
2016-05-04 tcofoegbuJAL-1563 JAL-2091 Added total result count to Uniprot... tree | commitdiff
2016-04-25 tcofoegbudevelop merge tree | commitdiff
2016-04-24 Jim ProcterJAL-2077 - reinstate popups on osx tree | commitdiff
2016-04-22 tcofoegbuJAL-2071 further refactoring, optimisation, and house... tree | commitdiff
2016-04-22 gmungocJAL-1812 JAL-2068 add Run Groovy Script to AlignFrame... tree | commitdiff
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free... tree | commitdiff
2016-04-12 gmungocJAL-2050 only hide introns if exons are present! Remove... tree | commitdiff
2016-04-11 gmungocJAL-1705 (new preference option to) hide introns when... tree | commitdiff
2016-04-01 tcofoegbuJAL-2045 JAL-2047 improvement for sorting PDB quality... tree | commitdiff
2016-03-24 gmungocJAL-1705 removed experimental 'highlight selection... tree | commitdiff
2016-03-21 tcofoegbuJAL-2028 added improvement for preconfigured ordering... tree | commitdiff
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