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[jalview.git] / src / jalview / renderer / seqfeatures / FeatureRenderer.java

2017-11-07	gmungoc	JAL-2069 update spike branch with latest	blob \| commitdiff
2017-11-07	gmungoc	JAL-2816 tweaks to feature visibility checks	blob \| commitdiff
2017-11-02	gmungoc	JAL-2808 spike updated with latest	blob \| commitdiff \| diff to current
2017-11-02	gmungoc	JAL-2808 feature filters held on FeatureRenderer, getCo...	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-20	gmungoc	Push 1793 latest to spike branch	blob \| commitdiff \| diff to current
2017-10-17	Jim Procter	JAL-2481 patch to fix findFeatureColour for end-of...	blob \| commitdiff \| diff to current
2017-10-09	Jim Procter	JAL-2446 remove duplicate code from pulled up method.	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-07-23	gmungoc	JAL-2481 JAL-2624 test for render feature below score...	blob \| commitdiff \| diff to current
2017-07-23	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-07-22	gmungoc	JAL-2624 check feature colour threshold when colouring...	blob \| commitdiff \| diff to current
2017-06-30	gmungoc	JAL-2526 correct treatment of contact features only...	blob \| commitdiff \| diff to current
2017-06-22	gmungoc	JAL-2481 JAL-2593 JAL-2526 further optimisation of...	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2589 render colour scheme gap colour in overview bug/JAL-2589gapColour	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2593 avoid redundant rendering of co-located features	blob \| commitdiff \| diff to current
2017-06-01	gmungoc	JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn	blob \| commitdiff \| diff to current
2017-05-31	gmungoc	JAL-2574 preparation for Sequence.findFeatures(col1...	blob \| commitdiff \| diff to current
2017-05-29	gmungoc	JAL-2526 Sequence.findPositions to get residue position...	blob \| commitdiff \| diff to current
2017-05-12	gmungoc	JAL-2480 efficient test for features present on sequence	blob \| commitdiff \| diff to current
2017-04-26	gmungoc	JAL-2490 findFeaturesAtRes with performant feature...	blob \| commitdiff \| diff to current
2017-03-22	gmungoc	JAL-2446 optimised new method to find feature colour...	blob \| commitdiff \| diff to current
2017-03-22	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-03-21	gmungoc	JAL-2438 removed (non-functional) lastSeq, lastSequence...	blob \| commitdiff \| diff to current
2017-03-20	gmungoc	JAL-2446 FeatureStore with NCList - work in progress	blob \| commitdiff \| diff to current
2017-03-15	gmungoc	JAL-2438 clarify code and javadoc, reinstate updateFeat...	blob \| commitdiff \| diff to current
2017-03-14	gmungoc	JAL-2438 unit test, fixes, Javadoc updates	blob \| commitdiff \| diff to current
2017-03-14	gmungoc	JAL-2438 comment/Javadoc tidies	blob \| commitdiff \| diff to current
2017-03-13	gmungoc	JAL-2438 corrected handling of default colour	blob \| commitdiff \| diff to current
2017-03-13	gmungoc	JAL-2438 FeatureColourFinder refactored from FeatureRen...	blob \| commitdiff \| diff to current
2016-11-17	gmungoc	JAL-2323 revert to thread-safe iteration over array...	blob \| commitdiff \| diff to current
2016-11-17	gmungoc	JAL-2327 disulfide bond abstracted to SequenceFeature...	blob \| commitdiff \| diff to current
2016-11-16	gmungoc	JAL-2323 render disulfide bond correctly on overview...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-07-18	Jim Procter	Merge branch 'features/JAL-2068groovyAnnotationWorker...	blob \| commitdiff \| diff to current
2016-06-20	Jim Procter	Merge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker	blob \| commitdiff \| diff to current
2016-05-10	gmungoc	Merge branch 'develop' into features/JAL-1956_featureStyles	blob \| commitdiff \| diff to current
2016-05-04	gmungoc	JAL-2090 removed test for Java > 1.1 to enable transparency	blob \| commitdiff \| diff to current
2016-05-03	gmungoc	JAL-2068 minimised jalview.gui imports, test for remove...	blob \| commitdiff \| diff to current
2016-02-24	gmungoc	JAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles	blob \| commitdiff \| diff to current
2016-02-12	gmungoc	JAL-2008 avoid unnecessary repaints; signatures changed...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 licencing for new files in src	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-07-23	Jim Procter	JAL-1819 use Float.isNaN() to check for NaNs!	blob \| commitdiff \| diff to current
2015-03-27	tcofoegbu	merge commit	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-02-19	gmungoc	JAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor	blob \| commitdiff \| diff to current
2015-01-09	Jim Procter	JAL-1483 formatting	blob \| commitdiff \| diff to current
2015-01-09	Jim Procter	JAL-1483 remember to look at base dataset sequence...	blob \| commitdiff \| diff to current
2014-08-08	j.procter@dundee...	JAL-1482 feature renderer and manipulation code refacto...	blob \| commitdiff \| diff to current

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