2017-03-21 |
kiramt | JAL-2388 Made ViewportRanges final |
tree | commitdiff |
2017-03-21 |
Jim Procter | Merge branch 'features/JAL-2388OverviewWindow' into... |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2388 Renamed column and row subtraction functions |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Applied ViewportRanges to code |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Renamed viewport position props to viewport... |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2439 Out-by-one in setting endRes/endSeq |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2431 show cDNA consensus after New View in split... |
tree | commitdiff |
2017-03-15 |
kiramt | JAL-2388 Unit tests and tidies |
tree | commitdiff |
2017-03-14 |
kiramt | JAL-2388 Working overview panel |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 Javadoc updates |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 comment/Javadoc tidies |
tree | commitdiff |
2017-03-13 |
gmungoc | JAL-2438 FeatureColourFinder refactored from FeatureRen... |
tree | commitdiff |
2017-03-10 |
kiramt | JAL-2388 Moving some alignment panel logic into overvie... |
tree | commitdiff |
2017-03-07 |
kiramt | JAL-2388 Fixed inherited&new out-by-one errors; further... |
tree | commitdiff |
2017-03-07 |
kiramt | JAL-2388 Additional unit tests |
tree | commitdiff |
2017-03-07 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-03-06 |
kiramt | JAL-2388 Dependency tidy |
tree | commitdiff |
2017-03-06 |
kiramt | JAL-2388 Remove OverviewDimensions dependency on gui... |
tree | commitdiff |
2017-03-06 |
kiramt | JAL-2388 Corrected overview panel behaviour, updated... |
tree | commitdiff |
2017-03-03 |
kiramt | JAL-2388 Initial removal of hidden cols/seqs out of... |
tree | commitdiff |
2017-03-01 |
kiramt | JAL-2388 Reverted to previous |
tree | commitdiff |
2017-03-01 |
gmungoc | Merge branch 'features/JAL-2295setChimeraAttributes... |
tree | commitdiff |
2017-03-01 |
kiramt | JAL-2388 Preliminary refactor check-in, does not compile |
tree | commitdiff |
2017-02-28 |
kiramt | JAL-2388 First move of endRes etc out of AlignmentViewp... |
tree | commitdiff |
2017-02-27 |
kiramt | JAL-2388 Make startRes,startSeq,endRes,endSeq private... |
tree | commitdiff |
2017-02-27 |
gmungoc | JAL-1632 dialog to calculate either Tree or PCA |
tree | commitdiff |
2017-02-27 |
kiramt | JAL-2388 Minor refactoring |
tree | commitdiff |
2017-02-27 |
gmungoc | JAL-1632 add score model params to PCAModel and PCA... |
tree | commitdiff |
2017-02-23 |
gmungoc | JAL-2403 JAL-1483 changes to ScoreModelI hierarchy... |
tree | commitdiff |
2017-02-21 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-02-21 |
kiramt | Merge branch 'develop' into features/JAL-2388OverviewWindow |
tree | commitdiff |
2017-02-20 |
Jim Procter | Merge branch 'features/JAL-2379pcaMemory' into develop |
tree | commitdiff |
2017-02-13 |
gmungoc | JAL-1632 JAL-2416 load score matrices from file, as... |
tree | commitdiff |
2017-02-10 |
gmungoc | JAL-2371 small move of code, typo correction |
tree | commitdiff |
2017-02-09 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-02-09 |
kiramt | JAL-2388 Initial refactor of OverviewPanel |
tree | commitdiff |
2017-02-09 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory features/JAL-2379pcaMemory |
tree | commitdiff |
2017-02-09 |
gmungoc | JAL-2405 set initial selection group alignment context |
tree | commitdiff |
2017-02-08 |
gmungoc | JAL-2405 set context on selection group for tailored... |
tree | commitdiff |
2017-02-07 |
gmungoc | JAL-2397 flag provided for 2.10.1 PCA gap calculation... |
tree | commitdiff |
2017-02-03 |
gmungoc | JAL-2379 'direct' pairwise score calculation for PCA... |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2371 commented code removed only |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2379 commented out code removed |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2371 CollectionColourScheme renamed ResidueShader... |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2360 JAL-2371 updates from review CR-JAL-1 |
tree | commitdiff |
2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refact... |
tree | commitdiff |
2017-01-23 |
gmungoc | JAL-2386 simplify changeColour (doesn't change colour... |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-2379 use SparseMatrix for encoded sequences, tidy... |
tree | commitdiff |
2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
tree | commitdiff |
2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
tree | commitdiff |
2016-12-04 |
Jim Procter | JAL-1933 switch from gap count to occupancy |
tree | commitdiff |
2016-12-02 |
gmungoc | JAL-1933 gap value as description; minor formatting |
tree | commitdiff |
2016-12-01 |
Jim Procter | JAL-1933 basic hack to get gap counts shown as an annot... |
tree | commitdiff |
2016-11-23 |
Jim Procter | Merge branch 'bug/JAL-2323disulfideOverview' into develop |
tree | commitdiff |
2016-11-22 |
Jim Procter | Merge branch 'features/JAL-1738_JAL-345_selectionfromhi... |
tree | commitdiff |
2016-11-21 |
Jim Procter | JAL-2335 patched FeatureRendererModel.findFeaturesAtRes... bug/JAL-2323disulfideOverview |
tree | commitdiff |
2016-11-21 |
gmungoc | Merge branch 'develop' into bug/JAL-2323disulfideOverview |
tree | commitdiff |
2016-11-17 |
gmungoc | JAL-98 ProfilesI container for profiles for columns |
tree | commitdiff |
2016-11-16 |
gmungoc | JAL-2323 render disulfide bond correctly on overview... |
tree | commitdiff |
2016-11-02 |
gmungoc | JAL-98 JAL-1854 encapsulate 'magic number' threshold... |
tree | commitdiff |
2016-11-02 |
gmungoc | JAL-98 ProfileI interface for Profile |
tree | commitdiff |
2016-11-02 |
gmungoc | JAL-98 Profile and ResidueCount moved from analysis... |
tree | commitdiff |
2016-10-28 |
Jim Procter | JAL-966 SearchResultsI now on viewmodels.AlignmentViewp... |
tree | commitdiff |
2016-10-28 |
Jim Procter | JAL-966 JAL-1738 JAL-345 interfaces for SearchResults... |
tree | commitdiff |
2016-10-26 |
gmungoc | Merge branch 'bug/JAL-98consensusMemory' into develop |
tree | commitdiff |
2016-10-26 |
gmungoc | JAL-98 null reference to globalColourScheme as it has... |
tree | commitdiff |
2016-10-25 |
Jim Procter | JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch |
tree | commitdiff |
2016-10-24 |
Jim Procter | Merge branch 'releases/Release_2_10_0_Branch' |
tree | commitdiff |
2016-10-24 |
gmungoc | JAL-2283 set 'by conservation' correctly when changing... |
tree | commitdiff |
2016-10-06 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory |
tree | commitdiff |
2016-10-06 |
Jim Procter | JAL-2089 Merge branch releases/Release_2_10_Branch... |
tree | commitdiff |
2016-10-05 |
Jim Procter | JAL-2189 source formatting |
tree | commitdiff |
2016-10-03 |
gmungoc | JAL-98 use Profile to store consensus, ResidueCount... |
tree | commitdiff |
2016-09-22 |
gmungoc | JAL-1421 typed ResidueProperties.propHash; JAL-2176... |
tree | commitdiff |
2016-09-22 |
gmungoc | JAL-2216 new dispose() method to null references |
tree | commitdiff |
2016-09-20 |
gmungoc | JAL-1306 calculate Quality also when Conservation not... |
tree | commitdiff |
2016-09-19 |
gmungoc | JAL-2172 test and code updates for readonly selection... |
tree | commitdiff |
2016-09-07 |
Jim Procter | Merge branch 'develop' into bug/JAL-1803_JAL-2157 |
tree | commitdiff |
2016-09-06 |
gmungoc | JAL-2147 additional test coverage for findMappingsForSe... |
tree | commitdiff |
2016-09-01 |
Jim Procter | JAL-2034 check context of selection group to catch... |
tree | commitdiff |
2016-08-31 |
Jim Procter | JAL-2034 moved ‘isDefinedGroup’ flag to a test method... |
tree | commitdiff |
2016-07-20 |
gmungoc | JAL-2023 stronger check for whether to start cdna consensus |
tree | commitdiff |
2016-07-18 |
Jim Procter | Merge branch 'features/JAL-2068groovyAnnotationWorker... |
tree | commitdiff |
2016-07-14 |
Jim Procter | fix for JAL-2147 |
tree | commitdiff |
2016-06-27 |
gmungoc | JAL-2133 refactored duplicated code to AlignmentViewport |
tree | commitdiff |
2016-06-22 |
gmungoc | JAL-1982 defensive checks for null annotations array |
tree | commitdiff |
2016-06-21 |
Jim Procter | Merge branch 'features/JAL-1956_featureStyles' into... |
tree | commitdiff |
2016-06-20 |
Jim Procter | Merge branch 'develop' into features/JAL-2068groovyAnno... features/JAL-2068groovyAnnotationWorker |
tree | commitdiff |
2016-06-02 |
tcofoegbu | JAL-1944 java doc update and minor house keeping |
tree | commitdiff |
2016-06-01 |
tcofoegbu | JAL-1944 updated bugfix implementation |
tree | commitdiff |
2016-05-31 |
tcofoegbu | JAL-1944 fix for visible seqs sometimes been replaced... |
tree | commitdiff |
2016-05-27 |
gmungoc | JAL-1989 tightened up use of flag for 'column selection... |
tree | commitdiff |
2016-05-10 |
gmungoc | Merge branch 'develop' into features/JAL-1956_featureStyles |
tree | commitdiff |
2016-05-09 |
gmungoc | JAL-2018 export graduated feature colours correctly |
tree | commitdiff |
2016-05-03 |
gmungoc | JAL-2068 minimised jalview.gui imports, test for remove... |
tree | commitdiff |
2016-04-27 |
Jim Procter | JAL-2085 JAL-2086 fix hiddenRepSequence and new referen... |
tree | commitdiff |
2016-04-14 |
gmungoc | JAL-1421 typed map / lists, explicit imports, method... |
tree | commitdiff |
next |