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JAL-1950 JAL-1958 bitscore is more effective for shading than e-value
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
2012-09-04
jprocter
unused variable
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commitdiff
2012-09-04
jprocter
JAL-974 JRonn thresholds
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commitdiff
2012-09-03
jprocter
JAL-975 JAL-974 JAL-976 always adjust height after...
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commitdiff
2012-09-03
jprocter
JAL-974 show thresholds for disorder predictor annotati...
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commitdiff
2012-08-31
jprocter
JAL-974 - ensure annotation created in local sequence...
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commitdiff
2012-08-29
jprocter
JAL-974 skip empty rows
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commitdiff
2012-08-29
jprocter
JAL-974 set GlobPlot raw/smooth score annotation rows...
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commitdiff
2012-08-29
jprocter
JAL-1153 new runtime property set to first non-null...
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commitdiff
2012-08-28
jprocter
remove contaminant imports
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commitdiff
2012-08-28
jprocter
JAL-676 JAL-1001 - simple menu item to access documenta...
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commitdiff
2012-08-28
jprocter
formatting
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commitdiff
2012-08-28
jprocter
formatting
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commitdiff
2012-08-28
jprocter
JAL-974 create mixture of sequence features marking...
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commitdiff
2012-08-28
jprocter
JAL-974 refactored creation of Annotation rows from...
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commitdiff
2012-08-28
jprocter
JAL-974 JAL-975 try to cope with temporary server error...
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commitdiff
2012-08-28
jprocter
JAL-1001 - hack to extract the global URL for a service...
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commitdiff
2012-08-14
Anne Menard
last version stay many bugs ..
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commitdiff
2012-08-07
jprocter
JAL-1137 clean up old-style menu code and look
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commitdiff
2012-08-07
jprocter
JAL-1137 JAL-975 simpler menu for the AACon service...
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commitdiff
2012-08-07
jprocter
JAL-975 JAL-1137 debug messages for web service client...
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commitdiff
2012-08-03
jprocter
JAL-1136 allow parameter sets to be transferred across...
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commitdiff
2012-08-03
jprocter
JAL-1136 less code-dependent formula for creating serve...
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commitdiff
2012-08-03
jprocter
JAL-1136 - fix abstraction for parameter container...
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commitdiff
2012-08-02
jprocter
JAL-976 better logging/error reporting for disorder...
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commitdiff
2012-08-01
jprocter
JAL-976 don't clear menu out before adding jabaws servi...
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commitdiff
2012-07-08
jprocter
JAL-976 clean out associated annotation
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commitdiff
2012-07-08
jprocter
JAL-976 implement additional calcId method
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commitdiff
2012-07-08
jprocter
JAL-976 simpler parameter update model
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 allow access to service URI for paramet...
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 recover current settings from associate...
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commitdiff
2012-07-08
jprocter
JAL-976 pick an available instance of a service based...
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commitdiff
2012-07-08
jprocter
bugfix - use currently held parameters
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commitdiff
2012-07-08
jprocter
JAL-976 - storing service parameters on the view model
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commitdiff
2012-07-06
jprocter
JAL-976 test if the sliders have been modified from...
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commitdiff
2012-07-06
jprocter
unique URI for service type
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commitdiff
2012-07-06
jprocter
JAL-961 JAL-976 abstracted container for dynamic calcul...
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commitdiff
2012-07-05
Anne Menard
Add support RNAML format
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commitdiff
2012-07-03
jprocter
JAL-961 allow calcId to be specified independently...
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commitdiff
2012-07-02
jprocter
JAL-974 create graduated feature colours for annotation...
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commitdiff
2012-06-20
jprocter
formatting
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commitdiff
2012-06-19
jprocter
JAL-976 JAL-975 JAL-1119 - pass on any existing paramet...
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commitdiff
2012-06-19
jprocter
JAL-975 JAL-1119 - prototype adjustable AACons paramete...
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commitdiff
2012-06-19
jprocter
JAL-975 - doh! valid result if width matches *ungapped...
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commitdiff
2012-06-19
jprocter
JAL-975 - bespoke AACons settings object to save curren...
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commitdiff
2012-06-19
jprocter
JAL-975 - ensure we only submit ungapped, padded alignm...
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commitdiff
2012-06-14
jprocter
JAL-975 JAL-1002 ensure custom parameters are actually...
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commitdiff
2012-06-14
jprocter
JAL-976 - make sure annotation panel is updated to...
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commitdiff
2012-06-14
jprocter
JAL-961 JAL-976 kill any existing AACon job if a new...
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commitdiff
2012-06-14
jprocter
JAL-1003 visual delay when running a sequence or alignm...
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commitdiff
2012-06-14
jprocter
JAL-961 JAL-976 tweaked way that AACons client is regis...
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commitdiff
2012-06-14
jprocter
formatting
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commitdiff
2012-06-14
jprocter
formatting
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commitdiff
2012-06-07
jprocter
JAL-976 ensure job id gets written out if there's an...
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commitdiff
2012-06-04
jprocter
javatidy
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commitdiff
2012-05-23
jprocter
TODO for JAL-976
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commitdiff
2012-05-23
jprocter
JAL-961 - annotatable datamodel objects can be queried...
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commitdiff
2012-03-28
jprocter
JAL-1060 - record which services are invalid, valid...
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commitdiff
2012-03-27
jprocter
(JAL-976) - consistent ordering of services according...
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commitdiff
2012-03-27
jprocter
JAL-976 - hack to provide consistent ordering of JABAWS...
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commitdiff
2012-03-27
jprocter
(JAL-976) refactor JABAWS1 list
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commitdiff
2011-11-14
jprocter
JAL-975 - ensure sequences are padded with gaps before...
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commitdiff
2011-11-07
jprocter
(JAL-974) - remove sun-internal class and use message...
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commitdiff
2011-11-07
jprocter
(JAL-976,JAL-975) disorder client menu items and check...
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commitdiff
2011-11-07
jprocter
(JAL-974,JAL-975) refactor common code for a JABAWS...
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commitdiff
2011-11-07
jprocter
(JAL-975) formatting
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commitdiff
2011-11-04
jprocter
(JAL-975) ensure AACons is only run on protein sequence...
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commitdiff
2011-11-03
jprocter
cleanup imports
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commitdiff
2011-11-03
jprocter
(JAL-975) client for amino acid conservation service...
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commitdiff
2011-11-03
jprocter
(JAL-974,JAL-975) new handler for JABAWS sequence and...
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commitdiff
2011-11-03
jprocter
(JAL-976) refactored common code for JABAWS v2 service...
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commitdiff
2011-11-03
jprocter
tidy imports
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commitdiff
2011-11-03
jprocter
(JAL-978) discover JABA1 and JABA2 services and generat...
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commitdiff
2011-11-03
jprocter
(JAL-978) refactored JABAWS2 service handle class to...
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
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commitdiff
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
2011-09-16
jprocter
JAL-940 - removed legacy service options from preferenc...
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commitdiff
2011-08-29
jprocter
JAL-633, JAL-591 - refactored ArgumentI.getValue from...
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commitdiff
2011-08-17
jprocter
JAL-853 use service action attribute to index services...
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commitdiff
2011-06-28
jprocter
fixes JAL-849 - double check after waiting a bit that...
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commitdiff
2010-11-04
jprocter
prevented URLs appearing in both the 'bad ' and the...
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commitdiff
2010-11-04
jprocter
report any problematic web service URLs ( JAL-343 )
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commitdiff
2010-10-29
jprocter
refactored so public interfaces take instances of WsPar...
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commitdiff
2010-10-29
jprocter
parallelised service endpoint discovery and ensured...
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commitdiff
2010-10-20
jprocter
more explicit menu entry text (JAL-675)
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commitdiff
2010-09-23
jprocter
apply jalview code style
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commitdiff
2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
2010-09-22
jprocter
ensure presets and parameters are discovered when servi...
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commitdiff
2010-09-20
jprocter
layout the menu with a minimum number of host labels
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commitdiff
2010-09-20
jprocter
only indicate that job is broken if it wasn't submitted...
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commitdiff
2010-09-20
jprocter
ensure host is shown for all non-host indexed submenus
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commitdiff
2010-09-19
jprocter
cache the runner config so the preset list can be retri...
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commitdiff
2010-09-19
jprocter
catch case when a service has no parameters (or the...
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commitdiff
2010-09-16
jprocter
reflect the state of a failed Job in the GUI (e.g....
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commitdiff
2010-09-10
jprocter
jabaws, not jaba
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commitdiff
2010-09-10
jprocter
properly report invalid jobs (server doesn't support...
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commitdiff
2010-09-09
jprocter
wrap preset description tooltips
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commitdiff
2010-09-09
jprocter
remove duplicate host URLs in service list when not...
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commitdiff
2010-09-07
jprocter
kick off the first time service parameter set discovery...
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commitdiff
2010-09-06
jprocter
JAL-591
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commitdiff
2010-09-06
jprocter
pass user preset arguments to job
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commitdiff
next