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Merge branch 'Jalview-JS/develop' into merge_js_develop
[jalview.git] / src / jalview / ws / jws2 /
2020-12-14 Jim ProcterMerge branch 'Jalview-JS/develop' into merge_js_develop tree | commitdiff
2020-11-13 Mateusz WaronwyJAL-3690 separate startup and poll code in SeqAnnotatio... tree | commitdiff
2020-10-21 Mateusz WarownyJAL - 3690 AlignCalc rebuilt - FutureTask-based manager tree | commitdiff
2020-07-20 Mateusz WarownyJAL-3690 alternative servers menu fix tree | commitdiff
2020-07-16 Mateusz WarownyJAL-3690 switching to CompletableFuture to allow chaining tree | commitdiff
2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery tree | commitdiff
2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update... alpha/merge_212_JalviewJS_2112 tree | commitdiff
2020-06-06 BobHansonJAL-3446 no actual changes; just using meaningful frame... tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 Discoverers tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... tree | commitdiff
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet Desktop and Jws2Discovere... tree | commitdiff
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separat... tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 set calcId and autocalculated flags for annota... tasks/JAL-3070_wsinterfaces tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 registerWorker start its thread automatically... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 report job ID when submitted tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 JAL-3066 provide standard concrete instances... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 formatting tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 alignment analysis service worker UI and setti... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 call checkDone() ASAP to avoid race condition... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decouple WsMenuEntryProviderI code from JABAWS tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 reorganise prior to refactor tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 make AlignCalcUI service code work only with... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 discoverers return ServiceWithParameter, now... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decontaminate the ‘preferred service’ methods... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 detect failed/broken annotation web service... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 pull up generic methods for an automatic align... tree | commitdiff
2019-10-01 Mateusz WarownyJAL-3066 Sequence annotation services. tree | commitdiff
2019-09-26 Jim ProcterJAL-3070 JAL-3066 JAL-3067 refactor annotation web... tree | commitdiff
2019-09-24 Jim ProcterJAL-3070 tidying tree | commitdiff
2019-09-23 Jim ProcterJAL-3066 JAL-3070 pull up non-jabaws specific service... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 configure annotation service manager from... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 rename AbstractJabaCalcWorker to SeqAnnotation... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 ensure RNAAliFold annotation rows display... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 formatting tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 detect presence of existing JABA RNAAliFold... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 match AbstractJabaCalcWorker’s annotation... tree | commitdiff
2019-09-23 Jim ProcterJAL-3070 javadoc for (mostly) jabaws specific methods tree | commitdiff
2019-09-20 Jim ProcterJAL-3070 rough-and-ready refactor of JABA SequenceAnnot... tree | commitdiff
2019-09-20 Jim ProcterJAL-3070 JAL-1379 deferred work on annotation based... tree | commitdiff
2019-09-06 Mateusz WarownyJAL-3066 Working custom parameters for clustalo tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
2019-07-10 Jim ProcterJAL-3070 standard way of storing/recovering documentati... tree | commitdiff
2019-07-10 Jim ProcterJAL-3070 remove final reference to Jws2Instance tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-06-04 Jim ProcterMerge branch 'develop' into developtomchmmer tree | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility... tree | commitdiff
2019-04-04 gmungocJAL-3220 unneeded main methods removed tree | commitdiff
2019-03-21 Ben SoaresJAL-3130 Replaced deprecated Class.newInstance() with... tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-13 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2019-01-26 hansonrJalview.isJS() --> Platform.isJS(), DBRefEntry[] -... tree | commitdiff
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour tree | commitdiff
2018-08-03 Jim ProcterJAL-3070 MsaWSClient doens’t depend on Jws2Instance... tree | commitdiff
2018-08-03 Jim ProcterJAL-3070 web service handle with UIinfo.hasParameters... tree | commitdiff
2018-08-02 Jim ProcterJAL-3070 base interface for service endpoint implementa... tree | commitdiff
2018-08-01 Jim ProcterJAL-3070 refactored Client specific code from jalview... tree | commitdiff
2018-07-27 Jim ProcterJAL-3070 pull up sequence anonymisation hash, presets... tree | commitdiff
2018-07-26 Jim ProcterJAL-3070 pull up logic for offering a parameters dialog... tree | commitdiff
2018-07-26 Jim ProcterJAL-3070 abstract class for services with adjustable... tree | commitdiff
2018-07-26 Jim ProcterJAL-3070 use ArgumentI in all public constructors,... tree | commitdiff
2018-07-26 Jim ProcterJAL-3070 pull up setWebService and alignFrame reference tree | commitdiff
2018-07-23 Jim ProcterJAL-3070 pushed down JABAWS specific args for WsJobPara... tree | commitdiff
2018-07-23 Jim ProcterJAL-3070 refactored JABAWS specific jalview.gui.WsJobPa... tree | commitdiff
2018-07-23 Jim ProcterMerge branch 'features/mchmmer' into merge/wsinterfaces... tree | commitdiff
2018-07-20 Jim ProcterJAL-3070 pull up hostURL and postURL to UIinfo and... tree | commitdiff
2018-07-20 Jim ProcterJAL-3070 core service descriptors for JABAWS services... tree | commitdiff
2018-07-10 gmungocJAL-3048 code reordered for JalviewJS compliance tree | commitdiff
2018-05-14 gmungocJAL-2989 support value display names for Option or... tree | commitdiff
2018-04-20 gmungocJAL-591 OptionBox FlowLayout, tweaks to wrapping of... tree | commitdiff
2018-04-16 gmungocJAL-2937 use preferences for presets, simplify some... tree | commitdiff
2018-02-20 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2017-10-27 gmungocJAL-1793 spike branch updated to latest tree | commitdiff
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... tree | commitdiff
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon... tree | commitdiff
2017-10-24 gmungocJAL-2738 update spike branch with latest tree | commitdiff
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-09-01 gmungocJAL-2488 remove finalize methods tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-18 TZVanaaltenMerge branch 'develop' into features/hmmer tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 choose appropriate alphabet for filtering... tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 source formatting tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 filterNonStandardResidues configurable for... tree | commitdiff
2017-08-14 Jim ProcterJAL-2663 flag and filter to exclude non-standard amino... tree | commitdiff
2017-08-14 Jim ProcterJAL-2663 source formatting tree | commitdiff
2017-08-10 TZVanaaltenJAL-2629 hmmalign now correctly creates a new frame tree | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch tree | commitdiff
2017-05-29 gmungocMerge branch 'develop' into features/JAL-2446NCList tree | commitdiff
2017-05-25 gmungocJAL-2050 make SequenceFeature.score final, adjust const... tree | commitdiff
2017-05-23 Jim ProcterJAL-2549 replace JABAWS 2.1 with 2.2 client and remove... tree | commitdiff
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... tree | commitdiff
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues tree | commitdiff
2017-03-23 kiramtJAL-2314 Tidies tree | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, tree | commitdiff
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane tree | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch tree | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... tree | commitdiff
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