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JAL-3878 Create skeleton for alignment service action
[jalview.git] / src / jalview / ws /
2021-11-18 Mateusz WarownyJAL-3066 Remove redundant throws declaration from Slivk... tree | commitdiff
2021-11-16 Mateusz WarownyMerge branch 'JAL-3866_RNAalifold-slivka-client' into... tree | commitdiff
2021-10-06 Mateusz WarownyJAL-3899 Update usages of uniquify and deuniquify. tree | commitdiff
2021-09-02 Mateusz WarownyAdd RNAalifold service instance to slivka web services. JAL-3866_RNAalifold-slivka-client tree | commitdiff
2021-07-29 Mateusz WarownyMerge branch 'improvement/JAL-3848_slivka_0.8' into... tree | commitdiff
2021-07-27 Mateusz WarownyMerge branch 'bug/JAL-3807_jpred-with-slivka' into... tree | commitdiff
2021-07-22 Jim ProcterJAL-3848 ensure annotation from a service gets a calcId... tree | commitdiff
2021-07-22 Jim ProcterJAL-3848 don’t include sequence limits in sequence... tree | commitdiff
2021-07-21 Mateusz WarownyJAL-3848 print exception for failed align jobs tree | commitdiff
2021-07-09 Mateusz WarownyMerge branch 'jpred-fix' into bug/JAL-3807_jpred-with... bug/JAL-3807_jpred-with-slivka tree | commitdiff
2021-07-09 Mateusz WarownyJAL-3807 Fix SlivkaWSInstance not fetching alignments. tree | commitdiff
2021-07-09 Mateusz WarownyMerge branch 'bug/JAL-3849_aacon-parameters' into impro... tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3848 SlivkaParamSet: reformat code and add service... tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3848 Update slivka client library. tree | commitdiff
2021-07-08 Mateusz WarownyJAL-3849 Remove join() which blocked the ui. tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Add single sequence capabilities to jws2... tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Move new JPred client to the jws2 package. tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3807 - Re-implement results processing. tree | commitdiff
2021-02-22 MateuszJAL-3807 JPred can now successfully submit and track... tree | commitdiff
2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3809_ws_params_dialog_fix' into... tree | commitdiff
2021-02-22 Mateusz WarownyMerge branch 'bug/JAL-3810_annotation_ws_stopping_abrup... bug/JAL-3809_ws_params_dialog_fix tree | commitdiff
2021-02-22 Mateusz WarownyJAL-3809 - Fixed param edit dialog for jalviewjs. tree | commitdiff
2021-02-22 MateuszMerge branch 'feature/JAL-3690_callback-based-web-servi... tree | commitdiff
2021-02-05 Mateusz WarownyJAL-3810 - Replace log.trace() calls with log.debug() tree | commitdiff
2021-01-22 MateuszJAL-3690 AACon ws menu entry fix. tree | commitdiff
2021-01-22 MateuszJAL-3690 Fix typo in enum name in slivka client. tree | commitdiff
2021-01-22 MateuszJAL-3690 Fixed slivka wsmenu categories. tree | commitdiff
2020-12-18 Jim ProcterJAL-3690 recoded AWSThread to use javax.swing.Timer... merge/Jalview-JS/develop_feature/JAL-3690_callback-based-web-services tree | commitdiff
2020-12-17 Jim ProcterJAL-3690 patch out use of java.streams/spliterator... tree | commitdiff
2020-12-15 Jim ProcterJAL-3690 patch out need for java.time in j2s (see https... tree | commitdiff
2020-12-14 Jim ProcterMerge branch 'Jalview-JS/develop' into merge_js_develop tree | commitdiff
2020-11-13 Mateusz WaronwyJAL-3690 separate startup and poll code in SeqAnnotatio... tree | commitdiff
2020-10-21 Mateusz WarownyJAL - 3690 AlignCalc rebuilt - FutureTask-based manager tree | commitdiff
2020-07-22 Mateusz WarownyJAL-3690 changed AWSThread to use Timer instead tree | commitdiff
2020-07-20 Mateusz WarownyJAL-3690 alternative servers menu fix tree | commitdiff
2020-07-17 Mateusz WarownyJAL-3690 restore jws1 JPred tree | commitdiff
2020-07-16 Mateusz WarownyJAL-3690 switching to CompletableFuture to allow chaining tree | commitdiff
2020-07-15 Mateusz WarownyJAL-3690 refactoring web-services discovery tree | commitdiff
2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update... alpha/merge_212_JalviewJS_2112 tree | commitdiff
2020-07-09 Mateusz WarownyMerge branch 'feature/JAL-3686_slivka_client_js_update... tree | commitdiff
2020-07-08 Mateusz WarownyJAL-3683 retrieve job status to output stream feature/JAL-3686_slivka_client_js_update tree | commitdiff
2020-07-08 Mateusz WarownyJAL-6386 update slivka client for j2s compatibility tree | commitdiff
2020-07-08 Mateusz WarownyMerge branch 'feature/JAL-3515-slivka-preferences'... tree | commitdiff
2020-06-30 gmungocJAL-3446 unused imports removed tree | commitdiff
2020-06-11 gmungocJAL-3624 unneeded import removed tree | commitdiff
2020-06-09 BobHansonJAL-3446 from JAL-3253-applet SequenceFetcher.getInsta... tree | commitdiff
2020-06-06 BobHansonJAL-3446 no actual changes; just using meaningful frame... tree | commitdiff
2020-06-05 BobHansonJAL-3446 UrlDownloadClient and Test tree | commitdiff
2020-06-03 BobHansonJAL-3446 adds SIFTs JAL-3625 SiftsClient tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 Discoverers tree | commitdiff
2020-06-03 BobHansonJAL-3446 from JAL-3253 ApplicationSingletonProvider... tree | commitdiff
2020-06-02 BobHansonJAL-3446 from JAL-3253-applet Desktop and Jws2Discovere... tree | commitdiff
2020-06-01 BobHansonJAL-3626 Regex optimization from JAL-3253-applet; also... tree | commitdiff
2020-05-28 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS tree | commitdiff
2020-05-28 gmungocJAL-3624 use temp file for SIFT download in JS, correct... tree | commitdiff
2020-05-19 gmungocJAL-3624 use temp file for SIFT download in JS, correct... feature/JAL-3624siftsInJS tree | commitdiff
2020-05-18 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS tree | commitdiff
2020-05-18 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2020-04-23 Jim ProcterMerge branch 'develop' into alpha/JAL-3362_Jalview_212_... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-02-06 MMWarownyImplement simple media type recognition. tree | commitdiff
2020-02-04 MMWarownyJAL-3515 Extract core WSDiscoverer methods to a separat... tree | commitdiff
2020-01-28 gmungocMerge branch 'feature/JAL-3121gffAttributeMap' into... tree | commitdiff
2019-12-05 MMWarownyJAL-3066 Comment on ambiguous parameter parsing. tree | commitdiff
2019-12-05 MMWarownyJAL-3066 Change Slivka connection to https tree | commitdiff
2019-11-28 MMWarownyJAL-3066 Fix incorrect URL resolving with /slivka prefix. tree | commitdiff
2019-11-15 MMWarownyJAL-3066 Change server to compbio.dundee.ac.uk/slivka tree | commitdiff
2019-11-04 MMWarownyInclude missing job states. tree | commitdiff
2019-11-01 Ben SoaresJAL-3474 removed all .cvsignore files stored in the... improvement/JAL-3474_lots_of_.cvsignore_files tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 Create labels for fields and hack it to work... tree | commitdiff
2019-10-11 Mateusz WarownyMerge remote-tracking branch 'origin/tasks/JAL-3070_wsi... tree | commitdiff
2019-10-11 Mateusz WarownyJAL-3066 change service type naming to avoid menu entry... tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 set calcId and autocalculated flags for annota... tasks/JAL-3070_wsinterfaces tree | commitdiff
2019-10-10 Jim ProcterMerge branch 'tasks/JAL-3070_wsinterfaces' into alpha... tree | commitdiff
2019-10-10 Jim ProcterJAL-3070 registerWorker start its thread automatically... tree | commitdiff
2019-10-09 Mateusz WarownyJAL-3066 Read parameters directly from args list allowi... tree | commitdiff
2019-10-09 Mateusz WarownyJAL-3066 Fix log files retrieval. tree | commitdiff
2019-10-07 Mateusz WarownyJal-3066 Retrieve job log and error log from the server. tree | commitdiff
2019-10-07 Jim ProcterRevert "JAL-3070 JAL-3066 fix initialisation of slivka... tree | commitdiff
2019-10-07 Mateusz WarownyJAL-3066 AACon: pass the instance name of the service... tree | commitdiff
2019-10-07 Mateusz WarownyJAL-3066 Check if annotation and features are present... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 report job ID when submitted tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 debug info: check response when adding feature... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 JAL-3070 AACon: pass the name of the service... tree | commitdiff
2019-10-07 Jim ProcterJAL-3066 hack to instantiate the correct client accordi... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 JAL-3066 provide standard concrete instances... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 JAL-3066 fix initialisation of slivka ServiceW... tree | commitdiff
2019-10-07 Jim ProcterJAL-3070 formatting tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 reinstate the internal test service URL for... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 slivka service discovery as a background threa... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 alignment analysis service worker UI and setti... tree | commitdiff
2019-10-03 Jim ProcterJAL-3070 call checkDone() ASAP to avoid race condition... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decouple WsMenuEntryProviderI code from JABAWS tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 reorganise prior to refactor tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 make AlignCalcUI service code work only with... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 discoverers return ServiceWithParameter, now... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 decontaminate the ‘preferred service’ methods... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 JAL-3062 tidy up slivka ws menu builder and... tree | commitdiff
2019-10-02 Jim ProcterJAL-3070 detect failed/broken annotation web service... tree | commitdiff
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