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JAL-1614 flag 'protein' removed
[jalview.git]
/
src
/
jalview
/
ws
/
2013-06-17
Jim Procter
Merge branch 'JAL-1319_jronn_npe' into develop
tree
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commitdiff
2013-06-17
Jim Procter
JAL-1319 (blacklist fix) check for presence of a score...
tree
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commitdiff
2013-06-09
Jim Procter
Merge branch 'develop' into develop_m2_8_1_2
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commitdiff
2013-06-09
Jim Procter
Merge branch '2_8_1_patch_multiharmony' into develop
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commitdiff
2013-06-09
Jim Procter
fix for JAL-1298
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commitdiff
2013-06-09
Jim Procter
JAL-715 - TODO
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commitdiff
2013-06-07
Jim Procter
Merge branch 'develop' into develop_m2_8_1_2
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commitdiff
2013-06-07
Jim Procter
Merge branch '2_8_1_patch_multiharmony' into develop
tree
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commitdiff
2013-06-07
Jim Procter
JAL-1309 fix broken partition computation for adding...
tree
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commitdiff
2013-06-07
Jim Procter
JAL-945 uniquify prior to submission
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commitdiff
2013-06-07
Jim Procter
formatting
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commitdiff
2013-06-07
Jim Procter
JAL-715 allow headless construction for testing
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commitdiff
2013-06-07
Jim Procter
JAL-724 JAL-715 refactor and create new test for RSBS...
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commitdiff
2013-06-07
Jim Procter
Merge branch 'develop' into develop_m2_8_1_2
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commitdiff
2013-06-07
Jim Procter
Merge branch 'JAL-1161_optimisingAnnotationPanel' into...
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commitdiff
2013-05-24
Jim Procter
typo
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commitdiff
2013-02-11
jprocter
upgrade to latest paradise services model using JSon...
tree
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commitdiff
2013-01-20
jprocter
Merge branch 'Dbfetch_hotfix-JAL-1238' into develop
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commitdiff
2013-01-18
jprocter
JAL-1238 order to place primary sources before lower...
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commitdiff
2013-01-18
jprocter
JAL-1238 method to test if DAS source is a primary...
tree
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commitdiff
2013-01-18
jprocter
JAL-1238 tier index indicating distance of a source...
tree
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commitdiff
2013-01-18
jprocter
Merge branch 'JAL-1254-hotfix' into develop
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commitdiff
2012-12-11
jprocter
JAL-1217 check and avoid NPE if no datastore object...
tree
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commitdiff
2012-12-11
jprocter
JAL-1217 report exception for service when no datastore...
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commitdiff
2012-11-17
jprocter
return alignmentI created from pdbfile class directly...
tree
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commitdiff
2012-11-17
jprocter
call annotate3d service and parse rnaml to alignment
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commitdiff
2012-11-17
jprocter
formatting
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commitdiff
2012-11-17
jprocter
simple HTTP multipart entity poster - may not be useful
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commitdiff
2012-11-15
jprocter
source formatting
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commitdiff
2012-11-15
jprocter
Merge branch 'develop' into menard
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commitdiff
2012-11-08
jprocter
tidy imports
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commitdiff
2012-10-22
jprocter
Jalview 2.8 Source Header
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commitdiff
2012-10-04
jprocter
Merge branch 'develop' into Release_2_8_Branch
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commitdiff
2012-10-04
jprocter
JAL-636 switch to simple REST interface to dbfetch...
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commitdiff
2012-10-04
jprocter
avoid importing the mapping every time we parse a unipr...
tree
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commitdiff
2012-10-04
jprocter
JAL-636 tweak main() based test to allow DAS sources...
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commitdiff
2012-10-03
jprocter
formatting
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commitdiff
2012-09-21
jprocter
JAL-849 try harder and wait for longer for JABAWS to...
tree
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commitdiff
2012-09-21
jprocter
JAL-1171 refactor code to allow gui update for global...
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commitdiff
2012-09-21
jprocter
JAL-1165 visual delay whilst results are processed.
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commitdiff
2012-09-05
jprocter
JAL-979 tidy up shmmr hardcoded WS definition
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commitdiff
2012-09-05
jprocter
formatting
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commitdiff
2012-09-05
jprocter
patch for NPE when no services are available to resolve...
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commitdiff
2012-09-05
jprocter
JAL-975 null any existing preset if user has supplied...
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commitdiff
2012-09-05
jprocter
JAL-994 fix when sequence is too short and no jobs run
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commitdiff
2012-09-05
jprocter
JAL-976 fix AACon name typo in source and GUI
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commitdiff
2012-09-04
jprocter
off by one for sequence associated annotation
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commitdiff
2012-09-04
jprocter
unused variable
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commitdiff
2012-09-04
jprocter
JAL-974 JRonn thresholds
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commitdiff
2012-09-03
jprocter
JAL-975 JAL-974 JAL-976 always adjust height after...
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commitdiff
2012-09-03
jprocter
JAL-974 show thresholds for disorder predictor annotati...
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commitdiff
2012-09-02
jprocter
JAL-659 cope with case insensitive accessions by forcin...
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commitdiff
2012-09-02
jprocter
JAL-1062 JAL-659 correct start position for retrieved...
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commitdiff
2012-09-02
jprocter
JAL-1062 use matching region or first section of sequen...
tree
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commitdiff
2012-08-31
jprocter
Merge branch 'develop' into menard
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commitdiff
2012-08-31
jprocter
JAL-974 - ensure annotation created in local sequence...
tree
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commitdiff
2012-08-31
jprocter
JAL-1064 patch for NPE when registerd database names...
tree
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commitdiff
2012-08-29
jprocter
JAL-974 skip empty rows
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commitdiff
2012-08-29
jprocter
JAL-974 set GlobPlot raw/smooth score annotation rows...
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commitdiff
2012-08-29
jprocter
JAL-1153 new runtime property set to first non-null...
tree
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commitdiff
2012-08-28
jprocter
remove contaminant imports
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commitdiff
2012-08-28
jprocter
JAL-676 JAL-1001 - simple menu item to access documenta...
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commitdiff
2012-08-28
jprocter
formatting
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commitdiff
2012-08-28
jprocter
formatting
tree
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commitdiff
2012-08-28
jprocter
JAL-974 create mixture of sequence features marking...
tree
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commitdiff
2012-08-28
jprocter
JAL-974 refactored creation of Annotation rows from...
tree
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commitdiff
2012-08-28
jprocter
JAL-974 JAL-975 try to cope with temporary server error...
tree
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commitdiff
2012-08-28
jprocter
JAL-1001 - hack to extract the global URL for a service...
tree
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commitdiff
2012-08-20
jprocter
JAL-1028 utilities package for accessing synchronous...
tree
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commitdiff
2012-08-17
jprocter
Merge branch 'develop' into menard
tree
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commitdiff
2012-08-14
Anne Menard
last version stay many bugs ..
tree
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commitdiff
2012-08-07
jprocter
JAL-1137 clean up old-style menu code and look
tree
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commitdiff
2012-08-07
jprocter
JAL-1137 JAL-975 simpler menu for the AACon service...
tree
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commitdiff
2012-08-07
jprocter
JAL-975 JAL-1137 debug messages for web service client...
tree
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commitdiff
2012-08-03
jprocter
JAL-1136 allow parameter sets to be transferred across...
tree
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commitdiff
2012-08-03
jprocter
JAL-1136 less code-dependent formula for creating serve...
tree
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commitdiff
2012-08-03
jprocter
JAL-1136 - fix abstraction for parameter container...
tree
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commitdiff
2012-08-02
jprocter
JAL-976 better logging/error reporting for disorder...
tree
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commitdiff
2012-08-01
jprocter
JAL-976 don't clear menu out before adding jabaws servi...
tree
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commitdiff
2012-07-16
Anne Menard
Last version
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commitdiff
2012-07-08
jprocter
JAL-976 clean out associated annotation
tree
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commitdiff
2012-07-08
jprocter
JAL-976 implement additional calcId method
tree
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commitdiff
2012-07-08
jprocter
JAL-976 simpler parameter update model
tree
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 allow access to service URI for paramet...
tree
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commitdiff
2012-07-08
jprocter
JAL-961 JAL-976 recover current settings from associate...
tree
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commitdiff
2012-07-08
jprocter
JAL-976 pick an available instance of a service based...
tree
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commitdiff
2012-07-08
jprocter
bugfix - use currently held parameters
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commitdiff
2012-07-08
jprocter
JAL-976 - storing service parameters on the view model
tree
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commitdiff
2012-07-06
jprocter
JAL-976 test if the sliders have been modified from...
tree
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commitdiff
2012-07-06
jprocter
unique URI for service type
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commitdiff
2012-07-06
jprocter
JAL-961 JAL-976 abstracted container for dynamic calcul...
tree
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commitdiff
2012-07-05
Anne Menard
Add support RNAML format
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commitdiff
2012-07-03
jprocter
JAL-961 allow calcId to be specified independently...
tree
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commitdiff
2012-07-02
jprocter
JAL-974 create graduated feature colours for annotation...
tree
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commitdiff
2012-06-20
jprocter
formatting
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commitdiff
2012-06-19
jprocter
JAL-976 JAL-975 JAL-1119 - pass on any existing paramet...
tree
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commitdiff
2012-06-19
jprocter
JAL-975 JAL-1119 - prototype adjustable AACons paramete...
tree
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commitdiff
2012-06-19
jprocter
JAL-975 - doh! valid result if width matches *ungapped...
tree
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commitdiff
2012-06-19
jprocter
JAL-975 - bespoke AACons settings object to save curren...
tree
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commitdiff
2012-06-19
jprocter
JAL-975 - ensure we only submit ungapped, padded alignm...
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commitdiff
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