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minor fix for * JAL-537
[jalview.git]
/
src
/
jalview
/
2010-05-17
jprocter
minor fix for * JAL-537
tree
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commitdiff
2010-05-17
jprocter
more robust jws2 service discovery
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commitdiff
2010-05-17
jprocter
refactored old jalview service code to its own package.
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commitdiff
2010-05-17
jprocter
always pass full web service exception details to the log
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commitdiff
2010-05-17
jprocter
always pass full web service exception details to the log
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commitdiff
2010-05-17
jprocter
always log info about services that are discovered
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commitdiff
2010-05-14
jprocter
First patch for * JAL-493
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commitdiff
2010-05-14
jprocter
standard function for bootstrapping discovery threads
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commitdiff
2010-05-14
jprocter
allow initLogger to be called multiple times
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commitdiff
2010-05-14
jprocter
partial patch for * JAL-466
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commitdiff
2010-05-14
jprocter
fix for JAL-533
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commitdiff
2010-05-12
jprocter
debug comment
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commitdiff
2010-05-12
jprocter
patch for JAL-528
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commitdiff
2010-05-12
jprocter
fix for JAL-527
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commitdiff
2010-04-30
jprocter
patch for bug #59999
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commitdiff
2010-04-30
jprocter
sort by length
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
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commitdiff
2010-04-29
jprocter
make sure references are intact when group annotation...
tree
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commitdiff
2010-04-29
jprocter
isAligned assertion (bug 0008144)
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commitdiff
2010-04-29
jprocter
property change race condition (bug 0062693) and isAlig...
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commitdiff
2010-04-29
jprocter
hide/show selected region menu entries and key bindings
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commitdiff
2010-04-29
jprocter
new selection manipulation method
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commitdiff
2010-04-29
jprocter
popup menu toggles between graduated colour and single...
tree
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commitdiff
2010-04-29
jprocter
osx pixel tweak
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commitdiff
2010-04-28
jprocter
jog pixels for OSX
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commitdiff
2010-04-28
jprocter
osx button colouring issue
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commitdiff
2010-04-28
jprocter
jog pixels for OSX
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches...
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches.
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commitdiff
2010-04-28
jprocter
graduated feature schemes (with visual indication of...
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commitdiff
2010-04-28
jprocter
null pointer when double click event occurs without...
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commitdiff
2010-04-28
jprocter
make groups from selection
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commitdiff
2010-04-28
jprocter
group/annotation association
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commitdiff
2010-04-28
jprocter
group/annotation association housekeeping
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commitdiff
2010-04-26
jprocter
new applet parameters: heightScale and widthScale
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commitdiff
2010-04-26
jprocter
build date output in the About box, and build details...
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commitdiff
2010-04-26
jprocter
disabled the justify functions for 2.5 release (see...
tree
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commitdiff
2010-04-23
jprocter
skips any annotation that appears to be identical to...
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commitdiff
2010-04-23
jprocter
next attempt for Bug #36198 - appears to work reproducibly
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commitdiff
2010-04-23
jprocter
tooltip is not shown for Annotation elements with zero...
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commitdiff
2010-04-23
jprocter
javadoc
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commitdiff
2010-04-23
jprocter
thread off a Filechooser instance on startup to make...
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commitdiff
2010-04-23
jprocter
default value boolean parameter getter
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commitdiff
2010-04-23
jprocter
fix for bug #8333
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commitdiff
2010-04-23
jprocter
fix for bug #62456
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commitdiff
2010-04-23
jprocter
ported logo rendering and label fit to column width...
tree
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commitdiff
2010-04-23
jprocter
ported basic elements of logo and group annotation...
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commitdiff
2010-04-23
jprocter
refresh table method
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commitdiff
2010-04-23
jprocter
1.1 compatibility
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commitdiff
2010-04-23
jprocter
1.1 compatibility and refresh table method
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commitdiff
2010-04-22
jprocter
non-positional feature export in gff and features file...
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commitdiff
2010-04-22
jprocter
feature settings is updated if new features are added...
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commitdiff
2010-04-22
jprocter
doc and todo about setting position of new internal...
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commitdiff
2010-04-22
jprocter
ensure there's always a space between ID and feature...
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commitdiff
2010-04-16
jprocter
patch for bug #36198 - more to follow on Monday.
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commitdiff
2010-04-16
jprocter
graduated feature color editing
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commitdiff
2010-04-16
jprocter
export graduated feature colors
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commitdiff
2010-04-16
jprocter
todo javadoc
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commitdiff
2010-04-16
jprocter
default for colourBylabel is false
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commitdiff
2010-04-15
jprocter
nullpointer bugfix (another repaint racecondition)
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commitdiff
2010-04-15
jprocter
ID tooltip preference settings and doc
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commitdiff
2010-04-14
jprocter
dialog box appears in centre of desktop window
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commitdiff
2010-04-14
jprocter
todo and disable selection sharing between views on...
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commitdiff
2010-04-14
jprocter
remove debug messages. fix order/reverse order issue...
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commitdiff
2010-04-14
jprocter
profile visualizations are now logos
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commitdiff
2010-04-14
jprocter
fix order/reverse order issue for sortByFeature
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commitdiff
2010-04-05
jprocter
ensure console contains build details in header
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commitdiff
2010-04-05
jprocter
javadoc, and unimplemented warning for group associated...
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commitdiff
2010-04-05
jprocter
unnecessary code
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commitdiff
2010-04-05
jprocter
javadoc
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commitdiff
2010-04-05
jprocter
Extend XML model for graduated feature colours, group...
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commitdiff
2010-04-05
jprocter
extend XML model for graduated feature colours, group...
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commitdiff
2010-04-02
jprocter
javadoc
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commitdiff
2010-04-02
jprocter
made threshold type enumaration into set of constants
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commitdiff
2010-04-02
jprocter
load and save graduated feature colours in XML
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commitdiff
2010-04-02
jprocter
extended Colour element with additional optional attrib...
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commitdiff
2010-04-02
jprocter
indicate the database id source associated with the...
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commitdiff
2010-04-02
jprocter
cli length limit
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commitdiff
2010-04-02
jprocter
urllength limit and more efficient url construction
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commitdiff
2010-04-02
jprocter
avoid occasional null exception
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commitdiff
2010-04-02
jprocter
better truncation mechanism
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commitdiff
2010-04-01
jprocter
prevent duplicate service submission links
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commitdiff
2010-04-01
jprocter
reinstate submission of database Ids as well as sequenc...
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commitdiff
2010-04-01
jprocter
refactored copy of groupURL mechanism into new Envision...
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commitdiff
2010-04-01
jprocter
new interface
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commitdiff
2010-04-01
jprocter
todo
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commitdiff
2010-03-30
jprocter
group autoannotation and consensus display settings
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commitdiff
2010-03-30
jprocter
bugfix for redraw when AlignPanel partially constructed...
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commitdiff
2010-03-30
jprocter
name update for group autoannotation and consensus...
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commitdiff
2010-03-26
jprocter
sync for cvs wierdness
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commitdiff
2010-03-26
jprocter
sync for cvs wierdness
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commitdiff
2010-03-26
jprocter
FeatureColourI removed
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commitdiff
2010-03-26
jprocter
gui/debug: integrate graduated feature colour editor...
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commitdiff
2010-03-26
jprocter
group autocalc annotation update logic (still broken)
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commitdiff
2010-03-26
jprocter
console output to stderr and stdout, and console buffer...
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commitdiff
2010-03-26
jprocter
profiles only shown for consensus row
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commitdiff
2010-03-26
jprocter
fix logic for annotation label popup (still outstanding...
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commitdiff
2010-03-26
jprocter
enable feature display when feature settings is opened.
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commitdiff
2010-03-26
jprocter
comments
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commitdiff
2010-03-26
jprocter
todo for graduated feature colours
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commitdiff
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