2007-01-23 |
amwaterhouse | boolean for internal copies |
tree | commitdiff |
2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
tree | commitdiff |
2007-01-23 |
jprocter | refactoring (added seqIndex/resIndex state for incremen... |
tree | commitdiff |
2007-01-23 |
jprocter | refactored search algorithm from gui classes |
tree | commitdiff |
2007-01-19 |
jprocter | reoganization of PDB sequence fetching for sequence... |
tree | commitdiff |
2007-01-19 |
jprocter | datasetSequence derive method and some checks |
tree | commitdiff |
2007-01-19 |
amwaterhouse | export features/annotations not for import |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Applet can output and load annotations, features |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Neeed to know protocol for annotation loading |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Need to know protocol to load anntotations |
tree | commitdiff |
2007-01-19 |
jprocter | javadoc |
tree | commitdiff |
2007-01-19 |
jprocter | added sequence feature copy constructor. |
tree | commitdiff |
2007-01-18 |
jprocter | random ';' |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Add the last sequence before annotations |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Take scrollOffset into account |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Tool tip for annotation description |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Set description on copy |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Set tooltip |
tree | commitdiff |
2007-01-18 |
amwaterhouse | 1.1 enabled |
tree | commitdiff |
2007-01-18 |
amwaterhouse | put vamsas bit back in |
tree | commitdiff |
2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[] |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Is secondary structure label modified |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Display description |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Descriptions can be added to annotations |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Edit name/description added to applet |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Fit to Window bug fixed |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Dont set the font of alignFrameMenubarcvs update applet... |
tree | commitdiff |
2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
tree | commitdiff |
2007-01-04 |
amwaterhouse | Reads in anything following seq id as a description |
tree | commitdiff |
2007-01-04 |
amwaterhouse | HEADER and ATOM must be position 0 |
tree | commitdiff |
2006-12-21 |
jprocter | description from vamsas sequence and file type change |
tree | commitdiff |
2006-12-21 |
amwaterhouse | check on sequence length |
tree | commitdiff |
2006-12-21 |
amwaterhouse | getSequenceAsString |
tree | commitdiff |
2006-12-21 |
amwaterhouse | getSequenceAsString |
tree | commitdiff |
2006-12-21 |
amwaterhouse | remove unnecessary import |
tree | commitdiff |
2006-12-21 |
jprocter | type change |
tree | commitdiff |
2006-12-19 |
amwaterhouse | org.vamsas is now uk.ac.vamsas |
tree | commitdiff |
2006-12-19 |
amwaterhouse | description may be null |
tree | commitdiff |
2006-12-14 |
amwaterhouse | set sequence_ref alignment |
tree | commitdiff |
2006-12-14 |
amwaterhouse | Watch out for - symbol lin jnet files |
tree | commitdiff |
2006-12-14 |
amwaterhouse | Are the labels all secondary Strutures? are the display... |
tree | commitdiff |
2006-12-14 |
amwaterhouse | one less cast |
tree | commitdiff |
2006-12-11 |
jprocter | fixed introduced bug (doh) |
tree | commitdiff |
2006-12-11 |
jprocter | clarified help documentation for annotation file format... |
tree | commitdiff |
2006-12-11 |
amwaterhouse | ensure lastSeq is refreshed if new feature added |
tree | commitdiff |
2006-12-07 |
amwaterhouse | set labels null if not being used |
tree | commitdiff |
2006-12-07 |
amwaterhouse | dont add char[] ref to a string |
tree | commitdiff |
2006-12-06 |
jprocter | type change |
tree | commitdiff |
2006-12-06 |
jprocter | typo fix. |
tree | commitdiff |
2006-12-06 |
jprocter | general pairwise substitution score models for pairwise... |
tree | commitdiff |
2006-12-06 |
amwaterhouse | protected ok |
tree | commitdiff |
2006-12-06 |
amwaterhouse | Change text of ok if viewport not null |
tree | commitdiff |
2006-12-06 |
amwaterhouse | textfield has focus |
tree | commitdiff |
2006-12-05 |
amwaterhouse | Set startRes 0 for switch to wrap view |
tree | commitdiff |
2006-12-05 |
amwaterhouse | sequence is char [] |
tree | commitdiff |
2006-12-05 |
amwaterhouse | Sequence is char [] |
tree | commitdiff |
2006-11-30 |
amwaterhouse | indexOf replaces contains |
tree | commitdiff |
2006-11-30 |
amwaterhouse | char array replaces string for cuts |
tree | commitdiff |
2006-11-30 |
amwaterhouse | DasRegistry moved again |
tree | commitdiff |
2006-11-30 |
amwaterhouse | sg might be null if mouse released after coloumns removed |
tree | commitdiff |
2006-11-30 |
amwaterhouse | Return true or false if file saved |
tree | commitdiff |
2006-11-30 |
amwaterhouse | Warning message if file was not saved, repaint ids... |
tree | commitdiff |
2006-11-30 |
jprocter | fix bad grammar in new alignment title |
tree | commitdiff |
2006-11-28 |
amwaterhouse | CurrentColour must not be accessed by multiple sequence... |
tree | commitdiff |
2006-11-28 |
jprocter | EBI web service interface update (and SequenceFetcher... |
tree | commitdiff |
2006-11-28 |
amwaterhouse | CurrentColour must not be accessed by multiple sequence... |
tree | commitdiff |
2006-11-28 |
amwaterhouse | Dont change ap font from treePanel |
tree | commitdiff |
2006-11-28 |
amwaterhouse | Dont change ap font from treePanel |
tree | commitdiff |
2006-11-28 |
amwaterhouse | Tree title |
tree | commitdiff |
2006-11-28 |
amwaterhouse | REmove system.out |
tree | commitdiff |
2006-11-28 |
amwaterhouse | Loads PDB files from jar file, new views can open PDB... |
tree | commitdiff |
2006-11-28 |
amwaterhouse | No need to create tmpAnnotationPanel every paint |
tree | commitdiff |
2006-11-28 |
amwaterhouse | Translation should not be adjusted outside annotation... |
tree | commitdiff |
2006-11-28 |
amwaterhouse | off by one group consensus calculation |
tree | commitdiff |
2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
tree | commitdiff |
2006-11-27 |
amwaterhouse | Cant save to a URL loaded Jar file |
tree | commitdiff |
2006-11-27 |
amwaterhouse | Allow new window from output sequences |
tree | commitdiff |
2006-11-27 |
amwaterhouse | New feature type, new colour set |
tree | commitdiff |
2006-11-27 |
amwaterhouse | Some reason final radioButtons added to ButtonGroups... |
tree | commitdiff |
2006-11-24 |
amwaterhouse | seqColours null |
tree | commitdiff |
2006-11-24 |
amwaterhouse | Fix load 1 col hidden bug |
tree | commitdiff |
2006-11-24 |
amwaterhouse | Invert col sel with hidden cols bug fixed |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Dont make groups of hidden sequences |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Transparency...... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Settooltips null |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Associate PCA with multiple views |
tree | commitdiff |
2006-11-23 |
amwaterhouse | REmove component when frame is closed |
tree | commitdiff |
2006-11-23 |
amwaterhouse | set icon false if raising windows |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Register TreePanel with paintrefresher |
tree | commitdiff |
2006-11-22 |
amwaterhouse | TreePanel added to PaintRefresher, not TreeCanvas |
tree | commitdiff |
2006-11-22 |
amwaterhouse | Dynamically build tree sort menu when sort menu is... |
tree | commitdiff |
2006-11-22 |
amwaterhouse | sort menuListener |
tree | commitdiff |
2006-11-22 |
amwaterhouse | menus renamed |
tree | commitdiff |
2006-11-22 |
amwaterhouse | Associate trees with views |
tree | commitdiff |
2006-11-22 |
amwaterhouse | Renaming viewNames |
tree | commitdiff |
2006-11-22 |
amwaterhouse | View name |
tree | commitdiff |
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