2017-06-06 |
gmungoc | JAL-2589 correct colour for Gap in Score and User Defin... |
tree | commitdiff |
2017-06-06 |
gmungoc | JAL-2526 less stringent test for invalid cursor |
tree | commitdiff |
2017-06-06 |
kiramt | Merge remote-tracking branch 'origin/bug/JAL-2576'... |
tree | commitdiff |
2017-06-05 |
Jim Procter | JAL-2590 patch for rendering eggnog trees with polytomi... |
tree | commitdiff |
2017-06-05 |
kiramt | JAL-2588 Naive implementation of gaps as grey in overview |
tree | commitdiff |
2017-06-05 |
Jim Procter | Merge branch 'bug/JAL-2576' into develop |
tree | commitdiff |
2017-06-05 |
kiramt | JAL-2586 Checkstyle flagged fix of unintended fall... |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2505 comments updated |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2480 remove redundant method, further test coverage |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2505 explicit (and final) contactFeature property |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2526sequenceCursor' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features/JAL-2526sequenceCursor |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2228 java 1.7 compliance |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 only hide/show columns intersecting with curre... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 get bitset representing hidden columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 use HiddenColumns.hideMarkedBits and take... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 method taking a BitSet for hiding columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 bug fix - BitSet.set is [start,end+1) |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 ‘Hide Insertions’ now operates on selection... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 SequenceI.getInsertionsAsBits for convenient... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2582 comment about IDs being lost if they resembl... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2582 recognise ENS…P peptide IDs and make two getPa... |
tree | commitdiff |
2017-06-02 |
Jim Procter | Merge branch 'bug/JAL-2578' into develop |
tree | commitdiff |
2017-06-02 |
Jim Procter | Merge branch 'bug/JAL-2577' into develop |
tree | commitdiff |
2017-06-02 |
Jim Procter | Merge branch 'features/JAL-2228_featureSetCounts_minRan... |
tree | commitdiff |
2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-02 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without... |
tree | commitdiff |
2017-06-02 |
tcofoegbu | JAL-2473 revised default minimum dimension for Alignmen... |
tree | commitdiff |
2017-06-02 |
Jim Procter | JAL-2228 always create zero score annotations, since... |
tree | commitdiff |
2017-06-02 |
Jim Procter | JAL-2228 always set minimum for count to zero for annot... |
tree | commitdiff |
2017-06-02 |
kiramt | JAL-2576 Proposed fix bug/JAL-2576 |
tree | commitdiff |
2017-06-02 |
kiramt | JAL-2577 Don't allow viewport ranges below 0. Unit... bug/JAL-2577 |
tree | commitdiff |
2017-06-02 |
kiramt | JAL-2578 Moved hidden columns reveal to before selectio... bug/JAL-2578 |
tree | commitdiff |
2017-06-02 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2526 additional calls to sequenceChanged() after... |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2526 zapCursor() renamed sequenceChanged() |
tree | commitdiff |
2017-06-01 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-06-01 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn |
tree | commitdiff |
2017-06-01 |
Jim Procter | Merge branch 'features/JAL-1648_cache_user_inputs'... |
tree | commitdiff |
2017-05-31 |
Jim Procter | Merge branch 'JAL-2571' into develop |
tree | commitdiff |
2017-05-31 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-31 |
gmungoc | JAL-2483 JAL-2575 don't sort newly discovered features |
tree | commitdiff |
2017-05-31 |
tcofoegbu | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2017-05-31 |
tcofoegbu | Fixed failing tests |
tree | commitdiff |
2017-05-31 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-31 |
gmungoc | JAL-2574 preparation for Sequence.findFeatures(col1... |
tree | commitdiff |
2017-05-31 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-31 |
gmungoc | JAL-2547 handle contact features 'around' a gap correctly |
tree | commitdiff |
2017-05-30 |
kiramt | JAL-2573 Fixes for alignment < viewport width, and... JAL-2571 |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2547 tooltip/AmendFeatures on gap straddled by... |
tree | commitdiff |
2017-05-30 |
kiramt | JAL-2571 Corrected alignment width/height checks to... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2570 don't zap group colour scheme when mapping... |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2526 first draft of findIndex/findPosition with... |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'bug/JAL-2034contextchange' into develop |
tree | commitdiff |
2017-05-29 |
tcofoegbu | JAL-1648 improvement on finder searchbox keyboard contr... |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'features/JAL-2465_No-mapping_Jmol-structu... |
tree | commitdiff |
2017-05-29 |
Jim Procter | JAL-2533 update javadoc features/JAL-2465_No-mapping_Jmol-structures-loaded-via-url |
tree | commitdiff |
2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-29 |
tcofoegbu | JAL-1648 code fix - enter key should pick selected... |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'bug/JAL-2536' into develop |
tree | commitdiff |
2017-05-29 |
Jim Procter | JAL-2536 tweak javadoc wording |
tree | commitdiff |
2017-05-29 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-29 |
gmungoc | JAL-2526 Sequence.findPositions to get residue position... |
tree | commitdiff |
2017-05-29 |
Jim Procter | Merge branch 'bug/JAL-2517cancelAppletColour' into... |
tree | commitdiff |
2017-05-27 |
Jim Procter | Merge branch 'bug/JAL-2491' into develop |
tree | commitdiff |
2017-05-27 |
Jim Procter | Merge branch 'bug/JAL-2547tooltipOnGap' into develop |
tree | commitdiff |
2017-05-27 |
Jim Procter | JAL-2526 test and documentation for SeqPanel.setStatus... |
tree | commitdiff |
2017-05-27 |
Jim Procter | JAL-2562 javadoc TODO |
tree | commitdiff |
2017-05-26 |
kiramt | JAL-2491 Missed port to applet from JAL-1691 bug/JAL-2491 |
tree | commitdiff |
2017-05-26 |
tcofoegbu | JAL-2465 Improvement to re-instate storing recently... |
tree | commitdiff |
2017-05-26 |
tcofoegbu | JAL-2465 fix to prevent files loaded from the system... |
tree | commitdiff |
2017-05-26 |
tcofoegbu | Merge branch 'features/JAL-1648_cache_user_inputs'... |
tree | commitdiff |
2017-05-26 |
tcofoegbu | JAL-1648 fix to transfer focus back to alignment frame... |
tree | commitdiff |
2017-05-26 |
gmungoc | JAL-2290 no update if no change of residue JAL-2547... |
tree | commitdiff |
2017-05-26 |
gmungoc | JAL-2480 move ContiguousI and Range to jalview.datamodel |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2557 removal of Sequence.sequenceFeatures |
tree | commitdiff |
2017-05-25 |
Jim Procter | Merge branch 'develop' into features/JAL-1648_cache_use... |
tree | commitdiff |
2017-05-25 |
kiramt | JAl-2034 Ported to applet bug/JAL-2034contextchange |
tree | commitdiff |
2017-05-25 |
kiramt | JAL-2034 don't update overview after click without... |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust const... |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2505 simplifying number of SequenceFeature construc... |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2490 test coverage of empty and null feature group... |
tree | commitdiff |
2017-05-25 |
kiramt | Merge branch 'bug/JAL-2551' into bug/JAL-2034contextchange |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 make SequenceFeature type, begin, end, feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2506 relocate Uniprot binding classes, bind to... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 remove setters for SequenceFeature.begin,end... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2529 add object_type=cdna to EnsemblCdna parameters |
tree | commitdiff |
2017-05-24 |
gmungoc | Merge branch 'bug/JAL-2541cutWithFeatures' into feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 JAL-2542 SequenceFeatures.shift() to shift... |
tree | commitdiff |
2017-05-24 |
kiramt | JAL-2551 Fix to group colouring when group extent is... bug/JAL-2551 |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2542 correct adjustment of sequence features for... |
tree | commitdiff |
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