JAL-2738 javadoc correction
[jalview.git] / src / jalview /
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2691_nomultimermapping' into...
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2665-2.10.2b' into documentation... bug/JAL-2673_mergewithproblem
2017-09-03 Jim ProcterMerge branch 'documentation/JAL-2675_release2102b1...
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2527' into documentation...
2017-09-03 Jim ProcterMerge branch 'features/JAL-2681_duplicatecrossrefs...
2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits
2017-08-31 kiramtJAL-2527 Updates following code review
2017-08-31 gmungocJAL-2704 unit test for Above PID gap colour, simplified... bug/JAL-2704gapColourFading
2017-08-30 gmungocJAL-2704 don't shade gap colour for PID/conservation
2017-08-30 kiramtJAL-2527 Code comments, tidy
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first...
2017-08-30 kiramtJAL-2527 Wired up cached values to overview
2017-08-30 kiramtMerge remote-tracking branch 'origin/feature/2588'...
2017-08-30 kiramtMerge branch 'feature/JAL-2664' into feature/JAL-2527
2017-08-30 kiramtJAL-2587 Removed dissolve feature/JAL-2587
2017-08-29 kiramtJAL-2664 Updates following review feature/JAL-2664
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up...
2017-08-29 Jim ProcterJAL-2698 spawn a thread to test for and raise auto...
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.2b
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.3
2017-08-29 kiramtJAL-2665 OOM check
2017-08-29 kiramtJAL-2665 ported fix to 2.10.3. Doesn't work.
2017-08-29 kiramtJAL-2665 Corrected to draw selections for wrapped printing
2017-08-28 kiramtJAL-2527 Started adding overview preferences
2017-08-28 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-08-28 kiramtMerge remote-tracking branch 'origin/releases/Release_2...
2017-08-28 kiramtJAL-2665 Changes for review comments; printing with... bug/JAL-2665
2017-08-27 Jim ProcterJAL-2691 catchall if passed dataset sequences (tests...
2017-08-27 Jim ProcterJAL-2693 TODO comments
2017-08-27 Jim ProcterJAL-2691 discover any existing chain mappings for a...
2017-08-27 Jim ProcterJAL-2691 cached view combo box value javadoc
2017-08-25 kiramtJAL-2587 Removed duplicate events fired to progress bar
2017-08-25 kiramtJAL-2587 Removed annoying double repaint on hide insertions
2017-08-25 kiramtJAL-2587 Update overview progress bar while drawing...
2017-08-25 kiramtJAL-2587 Progress bar sizing tweaks
2017-08-25 gmungocJAL-2480 suppress debug timing output that got left in
2017-08-25 kiramtJAL-2587 Made progress bar display before overview...
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone
2017-08-22 Jim ProcterJAL-1551 formatting
2017-08-22 Jim ProcterJAL-2681 canonicalise DB source before fetching to...
2017-08-22 Jim ProcterJAL-2681 formatting
2017-08-21 Jim ProcterJAL-2588 don’t test char==gap until we know the shader... feature/2588
2017-08-21 Jim ProcterJAL-2588 field on overview colour finder for default...
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList
2017-08-18 Jim ProcterMerge branch 'feature/2588' into merge/develop_feature...
2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-08-18 kiramtJAL-2664 Adjusted colour of hidden cols/seqs
2017-08-18 kiramtJAL-2664 Correct colouring for rows
2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-08-18 kiramtJAL-2665 Comments
2017-08-18 kiramtJAL-2665 Refactoring (and side-effect fix for JAL-2672)
2017-08-18 kiramtJAL-2665 tidies
2017-08-17 kiramtJAL-2665 Code tidies
2017-08-17 kiramtJAL-2665 Fixed wrapped mode group over >1 panel; and...
2017-08-17 kiramtJAL-2665 partial fix for selection running over 2 wrapp...
2017-08-17 kiramtJAL-2665 Correct position of selection switching from...
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-08-16 kiramtJAL-2665 Working with hidden columns
2017-08-16 kiramtJAL-2665 Added hidden columns group selection - almost...
2017-08-16 kiramtJAL-2665 Selecting on wrapped alignments
2017-08-16 kiramtJAL-2556 start to account for wrapped alignments
2017-08-16 kiramtJAL-2665 Tidy
2017-08-16 kiramtJAL-2665 fix resize
2017-08-16 kiramtJAL-2556 Code tidy
2017-08-16 kiramtJAL-2556 Resolved group update on colouring and escape
2017-08-16 kiramtJAL-2665 Added sequence group update event.
2017-08-16 kiramtJAL-2665 Draw selection group - works on scroll but...
2017-08-15 kiramtJAL-2265 turn off NPE
2017-08-14 Jim ProcterJAL-2335 choose appropriate alphabet for filtering...
2017-08-14 Jim ProcterJAL-2335 source formatting
2017-08-14 Jim ProcterJAL-2335 filterNonStandardResidues configurable for...
2017-08-14 Jim ProcterMerge branch 'patch/JAL-2663_filterAACons' into develop
2017-08-14 Jim ProcterJAL-2663 flag and filter to exclude non-standard amino...
2017-08-14 Jim ProcterJAL-2663 source formatting
2017-08-14 kiramtJAL-2664 Initial change to drawing hidden regions in...
2017-08-10 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-10 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-08-10 kiramtJAL-2587 tidy
2017-08-10 gmungocJAL-2660 used saved value of ignoreGapsInConsensus...
2017-08-10 kiramtJAL-2587 Tinkering with progress panel appearance
2017-08-10 kiramtJAL-2587 prevented double overview recalc on opening...
2017-08-10 gmungocJAL-2505 apply changed description to new, not deleted...
2017-08-10 gmungocJAL-2658 ensure features dropdown entries are unique
2017-08-10 gmungocJAL-2593 don't filter out 'colour by label' features
2017-08-10 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-09 Jim ProcterJAL-2426 Rfam download suffix
2017-08-09 Jim ProcterJAL-2426 JAL-1270 report Xfam download URL used if...
2017-08-09 Jim ProcterJAL-2425 raw stockholm download URLs
2017-08-09 Jim ProcterJAL-2425 remove overloaded getSequenceRecords method...
2017-08-09 kiramtJAL-2587 Adjusting height for progress bar
2017-08-09 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-09 kiramtJAL-2587 fiddling with dimensions
2017-08-09 kiramtJAL-2587 Keep progress bar panel in position regardless...
2017-08-09 gmungocJAL-2480 inline one method, improve comments
2017-08-09 Jim ProcterMerge branch 'bug/JAL-2634' into develop
2017-08-09 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into...
2017-08-09 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-08-08 gmungocJAL-2560 alternative fix (reinstate lost line of code)
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