2020-11-10 |
Ben Soares | JAL-3676 improvement for visual selection of console... |
tree | commitdiff |
2020-11-10 |
Ben Soares | JAL-3676 code review -- added non-listed Level into... |
tree | commitdiff |
2020-11-10 |
Ben Soares | JAL-3676 Added Log Level ComboBox and Copy to Clipboard... |
tree | commitdiff |
2020-11-10 |
Ben Soares | JAL-3628 Fix for slightly incorrect boolean usage to... |
tree | commitdiff |
2020-11-10 |
Ben Soares | JAL-3628 Even more Cache.log.debug statements |
tree | commitdiff |
2020-11-10 |
Ben Soares | JAL-3628 More Cache.log.debug statements |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3628 Changed other calls to renameTo to use BackupF... |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3628 Changed all file1.renameTo(file2) calls to... |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 formatting save after cherry-picks |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 Report when scale setting used. |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 New auto-scale 'formula' for linux HiDPI.... |
tree | commitdiff |
2020-11-06 |
soares | JAL-3609 corrected maxdimension to mindimension. Adjust... |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 removed debugging prints |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 changed property names to something more palat... |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 system properties to force a scale, or automat... |
tree | commitdiff |
2020-11-06 |
Ben Soares | JAL-3609 Added a -DforceHiDPISetting=true option mainly... |
tree | commitdiff |
2020-11-05 |
Ben Soares | JAL-3608 cherry pick of 92cb745e7 |
tree | commitdiff |
2020-10-28 |
Jim Procter | JAL-3760 refactor nucleotide proportion test to per... |
tree | commitdiff |
2020-10-28 |
Jim Procter | fix for JAL-3765 |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 Javadoc, check for null, additional tests task/JAL-3763_newDatasetForCds |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3751 only merge strictly contiguous ranges of mappings |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 test coverage for AlignedCodonFrame.markMapped... |
tree | commitdiff |
2020-10-15 |
gmungoc | JAL-3763 unused method removed |
tree | commitdiff |
2020-10-08 |
gmungoc | JAL-3763 failsafe check for null |
tree | commitdiff |
2020-10-08 |
gmungoc | JAL-3763 refactored getCoveringMapping for virtual... |
tree | commitdiff |
2020-10-08 |
gmungoc | JAL-3763 always make a new dataset sequence for CDS... |
tree | commitdiff |
2020-10-02 |
Jim Procter | JAL-3762 check for !args || args=="" before overwriting Jalview-JS/bug/JAL-3762_URLparamsOverrideInfoArg |
tree | commitdiff |
2020-10-02 |
Jim Procter | JAL-3762 more typo fixing :q |
tree | commitdiff |
2020-10-02 |
Jim Procter | JAL-3762 syntax error typo |
tree | commitdiff |
2020-10-02 |
Jim Procter | JAL-3762 check if Info.args already defined before... |
tree | commitdiff |
2020-09-21 |
Jim Procter | Merge branch 'merge_review/JAL-3490_2_11_2_develop... |
tree | commitdiff |
2020-09-17 |
gmungoc | JAL-3700 additions and corrections to unit tests bug/JAL-3700_mapSequenceSelection |
tree | commitdiff |
2020-09-14 |
Ben Soares | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-09-14 |
Ben Soares | Merge branch 'feature/JAL-3615gzipXfam' into develop |
tree | commitdiff |
2020-09-14 |
Ben Soares | JAL-3609 HiDPI scale setting done via system prop in... |
tree | commitdiff |
2020-09-10 |
gmungoc | JAL-3518 removed unneeded override in ChimeraCommands |
tree | commitdiff |
2020-09-10 |
gmungoc | JAL-2422 comments updated re ALTLOC handling |
tree | commitdiff |
2020-09-03 |
gmungoc | JAL-3648 resize annotation panel after dragging to... |
tree | commitdiff |
2020-09-03 |
Ben Soares | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-08-31 |
Jim Procter | JAL-3732 - sequences can be moved up/down in cursor... |
tree | commitdiff |
2020-08-31 |
gmungoc | JAL-3018 Ensembl reviewed REST version updated to 13.0 |
tree | commitdiff |
2020-08-31 |
gmungoc | JAL-1191 use Cache.log for logging |
tree | commitdiff |
2020-08-31 |
gmungoc | JAL-1191 reduce logging level for warnings |
tree | commitdiff |
2020-08-24 |
gmungoc | JAL-3018 updated reviewed REST version to 12.0 |
tree | commitdiff |
2020-08-21 |
Jim Procter | JAL-3615 code tidy, improve unit test |
tree | commitdiff |
2020-08-20 |
Ben Soares | JAL-2656 better read of (potential) gzip magic bytes |
tree | commitdiff |
2020-08-18 |
gmungoc | JAL-2656 Java 8 compatible test for gzipped, refactored... |
tree | commitdiff |
2020-08-17 |
Jim Procter | JAL-3490 don't init the combo box's history cache for... |
tree | commitdiff |
2020-08-17 |
Jim Procter | JAL-3490 merged with 2.11.2 develop |
tree | commitdiff |
2020-08-17 |
Jim Procter | Merge branch 'task/JAL-3597memoryLeakTest' into develop |
tree | commitdiff |
2020-08-12 |
Ben Soares | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-08-12 |
Jim Procter | Merge branch 'task/JAL-3608_property_set_laf_and_tests... |
tree | commitdiff |
2020-08-09 |
Ben Soares | JAL-3691 Changed .toUppoerCase().startsWith(...) to... |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 parse multiline feature qualifiers and escaped... |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3700 fix for propagation of sort commands |
tree | commitdiff |
2020-08-04 |
Ben Soares | JAL-3477 Added -help text for jvmmempc and jvmmemmax... |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3700 check for 'covering' mapping when matching... |
tree | commitdiff |
2020-08-03 |
Jim Procter | Merge branch 'bug/JAL-2983negativeSliderMin' into develop |
tree | commitdiff |
2020-07-29 |
Jim Procter | JAL-3371 JAL-2983 don't modify 'extent' of slider ... |
tree | commitdiff |
2020-07-28 |
Jim Procter | Merge branch 'feature/JAL-3615gzipXfam' into develop |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-3615 JAL-2656 missing import after cherrypick |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-2656 recognise non-HTTP URI input streams as gzippe... |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-2656 recognise Gzipped file input streams by their... |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 set CDS /product as EMBLCDSPROTEIN description |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 refactor/complete parsing, more unit test... |
tree | commitdiff |
2020-07-27 |
Jim Procter | JAL-3697 show total number of features not shown |
tree | commitdiff |
2020-07-27 |
Jim Procter | JAL-3696 log the error message from the exception to... |
tree | commitdiff |
2020-07-24 |
gmungoc | JAL-3692 parse DE for description, and other refactoring... |
tree | commitdiff |
2020-07-22 |
gmungoc | JAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... |
tree | commitdiff |
2020-07-21 |
gmungoc | JAL-3692 EMBL flatfile fetcher / parser (todo: CDS... |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-1421 last change tidied up properly |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-1421 types added to nameHash and nodeHash maps |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
tree | commitdiff |
2020-07-07 |
Ben Soares | JAL-3608 Changes from code review CR-JAL-236 |
tree | commitdiff |
2020-07-07 |
gmungoc | JAL-1424 streamlined message checker, corrected applet... |
tree | commitdiff |
2020-07-06 |
gmungoc | JAL-3311 JAL-3141 JAL-3144 tidying obsolete message... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-2656 JAL-3615 check response headers to test for... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-3615 used gzip endpoints for Pfam and Rfam |
tree | commitdiff |
2020-06-29 |
Jim Procter | Merge branch 'develop' of source.jalview.org/git/jalvie... |
tree | commitdiff |
2020-06-29 |
Jim Procter | JAL-3493 clear search highlights when escape/deselect all |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3674 more finessed asynchronous structure commands |
tree | commitdiff |
2020-06-29 |
gmungoc | Merge branch 'develop' of https://source.jalview.org... |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3518 corrected pulled up focusView() command |
tree | commitdiff |
2020-06-29 |
gmungoc | JAL-3518 corrected action on pulled up closeViewer() |
tree | commitdiff |
2020-06-28 |
gmungoc | JAL-3551 PyMOL command constants tidied |
tree | commitdiff |
2020-06-28 |
gmungoc | JAL-3551 fit to window (zoom) command for PyMOL |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3673 make sure font metrics are updated if dealing... |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3518 fix highlighting in Jalview for selections... |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3672 more efficient when debug not enabled |
tree | commitdiff |
2020-06-26 |
Jim Procter | JAL-3671 hardwire log4j.root logger to INFO to supress... |
tree | commitdiff |
2020-06-26 |
gmungoc | JAL-3518 tidy up asynchronous structure command execution |
tree | commitdiff |
2020-06-25 |
gmungoc | JAL-2010 unused prototype method removed |
tree | commitdiff |
2020-06-25 |
gmungoc | JAL-3518 pull up [get|list]ResidueAttributes to Structu... |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 separation of ChimeraXManager, pull up of... |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 pull up closeViewer() and external viewer... |
tree | commitdiff |
2020-06-01 |
gmungoc | JAL-3518 more test coverage for structure commands |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-2422 test updated |
tree | commitdiff |
2020-05-29 |
gmungoc | Merge branch 'feature/JAL-3551Pymol' into develop |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-3551 null pointer defence while structure files... feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-28 |
gmungoc | JAL-3551 corrected Pymol open session command |
tree | commitdiff |
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