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Merge branch 'bug/JAL-2691_nomultimermapping' into documentation/JAL-2675_release2102b1
[jalview.git] / src / jalview /
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2691_nomultimermapping' into... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'bug/JAL-2665-2.10.2b' into documentation... bug/JAL-2673_mergewithproblem tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'feature/JAL-2527' into documentation... tree | commitdiff
2017-09-03 Jim ProcterMerge branch 'features/JAL-2681_duplicatecrossrefs... tree | commitdiff
2017-08-31 kiramtJAL-2527 Updated Spanish, adjusted UI so Spanish fits tree | commitdiff
2017-08-31 kiramtJAL-2527 Updates following code review tree | commitdiff
2017-08-30 kiramtJAL-2527 Code comments, tidy tree | commitdiff
2017-08-30 kiramtJAL-2527 Added default setting/resetting and first... tree | commitdiff
2017-08-30 kiramtJAL-2527 Wired up cached values to overview tree | commitdiff
2017-08-30 kiramtMerge remote-tracking branch 'origin/feature/2588'... tree | commitdiff
2017-08-30 kiramtMerge branch 'feature/JAL-2664' into feature/JAL-2527 tree | commitdiff
2017-08-29 kiramtJAL-2664 Updates following review feature/JAL-2664 tree | commitdiff
2017-08-29 kiramtJAL-2527 Added overview prefs - don't get picked up... tree | commitdiff
2017-08-29 kiramtJAL-2665 OOM checks just in case bug/JAL-2665-2.10.2b tree | commitdiff
2017-08-29 kiramtJAL-2665 Corrected to draw selections for wrapped printing tree | commitdiff
2017-08-28 kiramtJAL-2527 Started adding overview preferences tree | commitdiff
2017-08-28 kiramtMerge remote-tracking branch 'origin/releases/Release_2... tree | commitdiff
2017-08-28 kiramtJAL-2665 Changes for review comments; printing with... bug/JAL-2665 tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 catchall if passed dataset sequences (tests... tree | commitdiff
2017-08-27 Jim ProcterJAL-2693 TODO comments tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 discover any existing chain mappings for a... tree | commitdiff
2017-08-27 Jim ProcterJAL-2691 cached view combo box value javadoc tree | commitdiff
2017-08-23 gmungocJAL-2435 last lost commit e926a5d redone tree | commitdiff
2017-08-22 Jim ProcterJAL-1551 formatting tree | commitdiff
2017-08-22 Jim ProcterJAL-2681 canonicalise DB source before fetching to... tree | commitdiff
2017-08-22 Jim ProcterJAL-2681 formatting tree | commitdiff
2017-08-21 Jim ProcterJAL-2588 don’t test char==gap until we know the shader... feature/2588 tree | commitdiff
2017-08-21 Jim ProcterJAL-2588 field on overview colour finder for default... tree | commitdiff
2017-08-18 Jim ProcterMerge branch 'feature/2588' into merge/develop_feature... tree | commitdiff
2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-08-18 kiramtJAL-2664 Adjusted colour of hidden cols/seqs tree | commitdiff
2017-08-18 kiramtJAL-2664 Correct colouring for rows tree | commitdiff
2017-08-18 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-08-18 kiramtJAL-2665 Comments tree | commitdiff
2017-08-18 kiramtJAL-2665 Refactoring (and side-effect fix for JAL-2672) tree | commitdiff
2017-08-18 kiramtJAL-2665 tidies tree | commitdiff
2017-08-17 kiramtJAL-2665 Code tidies tree | commitdiff
2017-08-17 kiramtJAL-2665 Fixed wrapped mode group over >1 panel; and... tree | commitdiff
2017-08-17 kiramtJAL-2665 partial fix for selection running over 2 wrapp... tree | commitdiff
2017-08-17 kiramtJAL-2665 Correct position of selection switching from... tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-08-16 kiramtJAL-2665 Working with hidden columns tree | commitdiff
2017-08-16 kiramtJAL-2665 Added hidden columns group selection - almost... tree | commitdiff
2017-08-16 kiramtJAL-2665 Selecting on wrapped alignments tree | commitdiff
2017-08-16 kiramtJAL-2556 start to account for wrapped alignments tree | commitdiff
2017-08-16 kiramtJAL-2665 Tidy tree | commitdiff
2017-08-16 kiramtJAL-2665 fix resize tree | commitdiff
2017-08-16 kiramtJAL-2556 Code tidy tree | commitdiff
2017-08-16 kiramtJAL-2556 Resolved group update on colouring and escape tree | commitdiff
2017-08-16 kiramtJAL-2665 Added sequence group update event. tree | commitdiff
2017-08-16 kiramtJAL-2665 Draw selection group - works on scroll but... tree | commitdiff
2017-08-15 kiramtJAL-2265 turn off NPE tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 choose appropriate alphabet for filtering... tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 source formatting tree | commitdiff
2017-08-14 Jim ProcterJAL-2335 filterNonStandardResidues configurable for... tree | commitdiff
2017-08-14 Jim ProcterMerge branch 'patch/JAL-2663_filterAACons' into develop tree | commitdiff
2017-08-14 Jim ProcterJAL-2663 flag and filter to exclude non-standard amino... tree | commitdiff
2017-08-14 Jim ProcterJAL-2663 source formatting tree | commitdiff
2017-08-14 kiramtJAL-2664 Initial change to drawing hidden regions in... tree | commitdiff
2017-08-10 gmungocJAL-2660 used saved value of ignoreGapsInConsensus... tree | commitdiff
2017-08-09 Jim ProcterJAL-2426 Rfam download suffix tree | commitdiff
2017-08-09 Jim ProcterJAL-2426 JAL-1270 report Xfam download URL used if... tree | commitdiff
2017-08-09 Jim ProcterJAL-2425 raw stockholm download URLs tree | commitdiff
2017-08-09 Jim ProcterJAL-2425 remove overloaded getSequenceRecords method... tree | commitdiff
2017-08-09 Jim ProcterMerge branch 'bug/JAL-2634' into develop tree | commitdiff
2017-08-09 Jim ProcterMerge branch 'documentation/JAL-2418_release2102' into... tree | commitdiff
2017-08-08 gmungocJAL-2560 alternative fix (reinstate lost line of code) tree | commitdiff
2017-08-08 gmungocJAL-2649 JAL-2650 wait for Conservation calc to complet... tree | commitdiff
2017-08-08 gmungocJAL-2650 configure new viewport settings before selecti... tree | commitdiff
2017-08-07 Jim ProcterMerge branch 'bug/JAL-2592userDefinedScheme' into develop tree | commitdiff
2017-08-03 gmungocJAL-2435 test for 'mirror font' option visible (not... tree | commitdiff
2017-08-01 Jim ProcterMerge branch 'bug/JAL-2632' into develop tree | commitdiff
2017-08-01 gmungocJAL-2611 reinstate missed merge - again! tree | commitdiff
2017-08-01 gmungocMerge branch 'feature/JAL-2611' into develop tree | commitdiff
2017-08-01 gmungocMerge branch 'bug/JAL-2630gradColourUpdateOverview... tree | commitdiff
2017-07-31 kiramtJAL-2634 Make overview box full height when alignment... bug/JAL-2634 tree | commitdiff
2017-07-31 gmungocJAL-2623 updated Overview/structure on input of thresho... bug/JAL-2630gradColourUpdateOverview tree | commitdiff
2017-07-31 kiramtJAL-2634 Added null test for graphics in AnnotationPane... tree | commitdiff
2017-07-31 gmungocJAL-2622 don't vertical scroll wrapped alignment id... tree | commitdiff
2017-07-31 gmungocJAL-2623 JAL-2015 set Below Threshold on FeatureColour... tree | commitdiff
2017-07-31 gmungocJAL-2630 applet update overview on release of threshold... tree | commitdiff
2017-07-28 kiramtJAL-2632 Added paintAlignment(true) to show cols code tree | commitdiff
2017-07-28 gmungocJAL-147 corrected status bar message for wrapped scroll... tree | commitdiff
2017-07-28 gmungocJAL-2622 no vertical scroll of wrapped alignment from... tree | commitdiff
2017-07-28 gmungocJAL-2006 squash rounding errors at min/max threshold... tree | commitdiff
2017-07-28 gmungocJAL-2630 update Overview/structure from graduated colou... tree | commitdiff
2017-07-22 gmungocJAL-2624 check feature colour threshold when colouring... tree | commitdiff
2017-07-22 gmungocJAL-2623 initialise colour threshold slider correctly tree | commitdiff
2017-07-22 kiramtMerge branch 'develop' into feature/JAL-2611 tree | commitdiff
2017-07-18 kiramtJAL-2611 Tidies, initial unit tests tree | commitdiff
2017-07-18 gmungocJAL-147 don't scroll up beyond startRes = 0 bug/JAL-147scrollWrappedView tree | commitdiff
2017-07-18 gmungocJAL-147 corrected calculation of vertical scroll positi... tree | commitdiff
2017-07-18 gmungocJAL-147 draw up to last position of wrapped alignment! tree | commitdiff
2017-07-18 kiramtJAL-2611 Better tree | commitdiff
2017-07-17 kiramtJAL-2611 Still not happy with behaviour tree | commitdiff
2017-07-14 kiramtJAL-2611 First pass, not thrilled with hidden column... tree | commitdiff
2017-07-14 kiramtMerge branch 'feature/JAL-2613' into feature/JAL-2611 tree | commitdiff
2017-07-14 kiramtJAL-2611 Pre-merge checkin tree | commitdiff
2017-07-13 kiramtJAL-2611 Added overview dimensions test for position... tree | commitdiff
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