2017-04-21 |
gmungoc | JAL-2423 tweak tree panel title, add Spanish text |
tree | commitdiff |
2017-04-21 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-04-21 |
tcofoegbu | JAL-2485 Bug fix to filter out uniprot response header... |
tree | commitdiff |
2017-04-21 |
kiramt | JAL-2388 Tidies |
tree | commitdiff |
2017-04-21 |
kiramt | JAL-2388 Make sure resizing still works |
tree | commitdiff |
2017-04-21 |
kiramt | JAL-2388 Alignment col and row collections with iterators |
tree | commitdiff |
2017-04-19 |
tcofoegbu | JAL-2482 added null check |
tree | commitdiff |
2017-04-19 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-04-18 |
tcofoegbu | JAL-2482 Bugfix |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-1632 removed check for aligned sequences for Tree... |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-1632 remove unused check for sequences aligned |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-2403 ensure array held in Matrix is immutable |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-2403 public static methods to convert distance... |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-1632 one PCA/Tree per panel, closed when panel... |
tree | commitdiff |
2017-04-11 |
tcofoegbu | Pull from develop features/JAL-2473_set-minimium-dimensions |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2403 improved ScoreModelI hierarchy as per Kira... |
tree | commitdiff |
2017-04-11 |
tcofoegbu | JAL-2473 removed unused fields in JalviewDialog |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2428 Javadoc |
tree | commitdiff |
2017-04-11 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2403 unit tests for PCA.computeSimilarity, signatur... |
tree | commitdiff |
2017-04-10 |
tcofoegbu | Merge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... |
tree | commitdiff |
2017-04-10 |
tcofoegbu | JAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux |
tree | commitdiff |
2017-04-10 |
tcofoegbu | Merge branch 'develop' into bug/JAL-2255_seq-fetcher... |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2403 removed remaining jvCalcMode references from PCA |
tree | commitdiff |
2017-04-10 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-04-10 |
tcofoegbu | JAL-2473 added improvement to apply default / custom... |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2361 option to save on OK of changed named colour... |
tree | commitdiff |
2017-04-09 |
gmungoc | JAL-2393 remove unused commented code |
tree | commitdiff |
2017-04-07 |
gmungoc | JAL-2393 code tidying for review comments |
tree | commitdiff |
2017-04-07 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2361 make a modified saved scheme the backout check... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2384 JAL-2371 update ResidueShader on change of... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2361 simplify constructors, select unsaved but... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2361 apply any saved changes to current colour... |
tree | commitdiff |
2017-04-03 |
gmungoc | Merge branch 'develop' into bug/JAL-2314 |
tree | commitdiff |
2017-04-03 |
gmungoc | Merge branch 'develop' into bug/JAL-2461 bug/JAL-2461 |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2405 additional checks for circular reference in... |
tree | commitdiff |
2017-03-31 |
gmungoc | Merge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2430 code tidy, unit test for Jmol hidden column... |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-1608 leave Create Group, Remove Group menu items... |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2401 code and help tidy for review comments |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2401 don't apply lower case colour to upper case |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
2017-03-29 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups |
tree | commitdiff |
2017-03-29 |
gmungoc | JAL-2416 JAL-728 reduced dependency on Blosum62 impleme... |
tree | commitdiff |
2017-03-29 |
gmungoc | JAL-2416 revert to '*' not '-' in score matrix, handle... |
tree | commitdiff |
2017-03-29 |
kiramt | JAL-2388 New rendering code, extensions to support... |
tree | commitdiff |
2017-03-29 |
kiramt | JAL-2388 New iterators and tests |
tree | commitdiff |
2017-03-29 |
gmungoc | JAL-2416 explicit constant for unknown/unknown identity... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2403 JAL-2416 pairwise score unexpected symbols... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2416 JAL-2403 remove unused '*' row/column from... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2403 further test coverage for ScoreMatrix, min... |
tree | commitdiff |
2017-03-28 |
gmungoc | JAL-2416 more test coverage of matrix parser |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 parse score matrices in either NCBI or AAindex... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 class Javadoc updates prior to parsing changes |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2468 change score model in PCAModel when switching |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 tidy up after switch from ' ' to '-' in score... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 score matrix gap symbol (if any) dynamically... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 tooltip with descriptions for score models... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 add score model description field for tooltip... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2403 SWDistanceModel now SmithWatermanModel - a... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2416 use '-' not space for gap in score matrices |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2428 unused method deleted |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2403 PIDDistanceModel deleted as superseded by... |
tree | commitdiff |
2017-03-27 |
gmungoc | JAL-2428 pass AlignmentView to TreeModel so Show Input... |
tree | commitdiff |
2017-03-24 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2428 simplify TreeModel constructors, add getOrigin... |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2428 use 'correct' name for selected score model |
tree | commitdiff |
2017-03-24 |
Jim Procter | JAL-2360 fix applet build by separating castor XML... |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-1632 TreeChooser renamed CalculationChooser, text... |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-1632 named parameters |
tree | commitdiff |
2017-03-24 |
kiramt | JAL-2388 Removing AlignmentPanel dependency (mostly) |
tree | commitdiff |
2017-03-24 |
kiramt | JAL-2314 Tidy up |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2464 fix cancel tree print behaviour |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-838 move two callers off Comparison.PID and depreca... |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Tweaks to stop thread sync issues |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2397 scale PCA by PID to alignment width to match... |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2397 formatting only |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-1632 suppress PID parameter options in Tree/PCA... |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-838 class javadoc added |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2464 fix cancel tree print behaviour |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2393 code tidy and comments, PIDDistanceModel depre... |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Tidies |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2388 Factored out applet overview canvas, threading... |
tree | commitdiff |
2017-03-23 |
gmungoc | Merge branch 'develop' into features/JAL-2393customMatrices |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2388 Rationalised overview panel drawing thread |
tree | commitdiff |
2017-03-22 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2461 Removed DAS error stack trace, updated message |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2388 Reinstated original overview checks for annota... |
tree | commitdiff |
2017-03-22 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2388 Minor changes to thread flags |
tree | commitdiff |
2017-03-21 |
kiramt | JAL-2388 Unpleasant but operational refactor into Overv... |
tree | commitdiff |
2017-03-21 |
kiramt | JAL-2388 Made ViewportRanges final |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2438 removed (non-functional) lastSeq, lastSequence... |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2243 update discovered features on opening structur... |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2438 check for null FeatureRenderer |
tree | commitdiff |
2017-03-21 |
Jim Procter | Merge branch 'features/JAL-2388OverviewWindow' into... |
tree | commitdiff |
2017-03-20 |
Jim Procter | Merge branch 'bug/JAL-2421overviewboxflicker' into... |
tree | commitdiff |
next |