2005-12-05 |
amwaterhouse | Use regex on seq names |
tree | commitdiff |
2005-12-05 |
amwaterhouse | not needed |
tree | commitdiff |
2005-12-05 |
amwaterhouse | Save features |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Output from newick menu item bug fixed |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Remove fillarc |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Remove comments |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Sequence, not SequenceI |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Reset frame position on startup |
tree | commitdiff |
2005-12-02 |
amwaterhouse | SequenceFeatures is null by default |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Null pointer removed |
tree | commitdiff |
2005-12-02 |
amwaterhouse | Larger for mac |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Only seek for sequences without features |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Applet changes |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Load pdb file with applet |
tree | commitdiff |
2005-11-30 |
amwaterhouse | AppletPDBViewer needs to know type of file transfer |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Get viewport and seqcanvas methods |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Parse id before url completion |
tree | commitdiff |
2005-11-30 |
amwaterhouse | REmove import |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Name parsing |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Make dataset with getName, not displayid |
tree | commitdiff |
2005-11-30 |
amwaterhouse | REpaint after sequence col selected |
tree | commitdiff |
2005-11-30 |
amwaterhouse | GetResidueBoxColour needs no colourscheme |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Parse id before showing uniprot link |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Exact mapping for applet as well |
tree | commitdiff |
2005-11-30 |
amwaterhouse | Remove deletebonds |
tree | commitdiff |
2005-11-30 |
amwaterhouse | TER flag added |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Add your own label |
tree | commitdiff |
2005-11-29 |
amwaterhouse | No need for method or chain |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Read in Protein name |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Uniprot retrieves features from XML |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Parse id before making URL |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Features added removed from alignment |
tree | commitdiff |
2005-11-29 |
amwaterhouse | ExactMapping is in pdbchain |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Wait till visiblebonds!=null before painting |
tree | commitdiff |
2005-11-29 |
amwaterhouse | Save features and pdbids |
tree | commitdiff |
2005-11-28 |
amwaterhouse | new Implementation for getting colour quickly |
tree | commitdiff |
2005-11-28 |
amwaterhouse | Correction for feature rendering |
tree | commitdiff |
2005-11-28 |
amwaterhouse | Mapping now performed in PDBChain |
tree | commitdiff |
2005-11-28 |
amwaterhouse | wrapped alignment 1 larger |
tree | commitdiff |
2005-11-28 |
amwaterhouse | Mapping for alignment added to residue |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Must follow alignmentPosition |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Comment out test lines |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Dont request focus |
tree | commitdiff |
2005-11-25 |
amwaterhouse | -1 adjust |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Read in Hetatms, allow for models, highlight in canvas |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Correct mapping for pdb file |
tree | commitdiff |
2005-11-24 |
amwaterhouse | Don't parse input id, leave it as it is |
tree | commitdiff |
2005-11-24 |
amwaterhouse | New EBI WS implementation |
tree | commitdiff |
2005-11-24 |
amwaterhouse | New WSWUBlast Client files |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Add PDB accession to new sequence |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Allow single line BLC files |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Use PDB column format |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Allow for 1 line BLC files |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Parse name from last index of / |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Use full name in dataset creation |
tree | commitdiff |
2005-11-18 |
amwaterhouse | Show error message outside thread loop |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Hidden tabs and vamsas refs for beta release |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Initial col is light gray |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Graphics must be set from nullFrame |
tree | commitdiff |
2005-11-17 |
amwaterhouse | No more isOverview |
tree | commitdiff |
2005-11-17 |
amwaterhouse | If overview is visible, update it |
tree | commitdiff |
2005-11-17 |
amwaterhouse | no more show translation |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Hide Tab settings for build |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Use setRGB rather than color, fillrect |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Move start and end before parsing name |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Hide vamsas settings for build |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Now outputs features and groups, and wrapped alignment... |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Optimized Overview |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Use stringbuffer, not string+ |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Remove system.out |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Highlight doesnt use offset |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Don't initialise a char in findIndex |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Don't set chain colours in hashtable |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Highlight from alignment |
tree | commitdiff |
2005-11-16 |
amwaterhouse | No more myAtom, Highlight from alignment |
tree | commitdiff |
2005-11-16 |
amwaterhouse | no need for myAtom |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Parsing updates |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Not used |
tree | commitdiff |
2005-11-15 |
amwaterhouse | No radio buttons in applet |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Dont use this yet |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Dont use myGraphics |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Removed |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Graphical bits moved into files to save jar size |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Removed to reduce jar size |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Modifications for Applet PDB viewer |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Add getAlignment function |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Modifications for Applet PDB |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Fix bug where all chains are called A |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Applet PDB viewer |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Catch exceptions |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Use shortname |
tree | commitdiff |
2005-11-14 |
amwaterhouse | getShortName |
tree | commitdiff |
2005-11-14 |
amwaterhouse | findByShortName |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Dont add sequence group at the moment |
tree | commitdiff |
2005-11-11 |
amwaterhouse | No new PDBViewer |
tree | commitdiff |
2005-11-11 |
amwaterhouse | Last chance, is the sequence without id? |
tree | commitdiff |
2005-11-11 |
amwaterhouse | SequenceFetcher new class |
tree | commitdiff |
2005-11-11 |
amwaterhouse | AddPdbEntry added |
tree | commitdiff |
2005-11-11 |
amwaterhouse | PNG and EPS in ImageMaker |
tree | commitdiff |
2005-11-10 |
amwaterhouse | Allow featuresettings to be enabled on load |
tree | commitdiff |
next |