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JAL-2844 check added for clicks left of root node
[jalview.git]
/
src
/
2017-11-29
kjvdheide
JAL-2844 check added for clicks left of root node
tree
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commitdiff
2017-11-29
kjvdheide
JAL-2844 entirely X coord based partitioning
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commitdiff
2017-11-29
kjvdheide
JAL-2844 somewhat better repainting
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commitdiff
2017-11-29
kjvdheide
JAL-2844 temporary kludge to draw a line
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commitdiff
2017-11-29
kjvdheide
JAL-2844 added grouping to alignment panel based on...
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commitdiff
2017-11-29
kjvdheide
JAL-2844 start on colouring back onto the alignment
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commitdiff
2017-11-29
kjvdheide
JAL-2844 added colouring to partition selection
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commitdiff
2017-11-28
kjvdheide
JAL-2844 added offset to x coord to make it equal 0...
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commitdiff
2017-11-28
kjvdheide
Merge remote-tracking branch 'origin/develop' into...
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commitdiff
2017-11-28
kjvdheide
JAL-2844 first go at partitioning, based on actual...
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2740' into develop
tree
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2827' into develop
tree
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2842' into develop
tree
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commitdiff
2017-11-27
kjvdheide
JAL-2844 added selection threshold (non-adjusted calcul...
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commitdiff
2017-11-27
kjvdheide
JAL-2799 re-enabled change listener for Aptx's tabs...
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commitdiff
2017-11-27
kjvdheide
JAL-2844 line drawing at mouse click added on top of...
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commitdiff
2017-11-26
kjvdheide
JAL-2847 first rough attempt at loading in via database ID
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commitdiff
2017-11-24
kjvdheide
JAL-2799 rearranged AptxInit code
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commitdiff
2017-11-24
kjvdheide
JAL-2799 ALL trees are now loaded in as separate Aptx...
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commitdiff
2017-11-24
kjvdheide
JAL-2794 binding now exclusively supports single tab...
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commitdiff
2017-11-24
kjvdheide
Merge branch 'kjvdh/features/PhylogenyViewer' of https...
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commitdiff
2017-11-24
kjvdheide
JAL-2838 start on sorting
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commitdiff
2017-11-24
kjvdheide
JAL-2838 made getAssociatedPanels public
tree
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commitdiff
2017-11-23
kiramt
Merge branch 'develop' into bug/JAL-2851
bug/JAL-2851
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commitdiff
2017-11-23
kiramt
JAL-2851 Fix merge error breaking vertical scrolling
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commitdiff
2017-11-22
kjvdheide
JAL-2794 reworked, everything routes via avport.sendsel...
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commitdiff
2017-11-22
kjvdheide
JAL-2794 removed several redundancies in the binding...
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commitdiff
2017-11-22
kjvdheide
JAL-2844 mouse press code rearranged to prepare for...
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commitdiff
2017-11-22
kjvdheide
JAL-2847 small things, filled in actionperformeds
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commitdiff
2017-11-22
kjvdheide
JAL-2799 fixed selections not carrying over to tabs...
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commitdiff
2017-11-21
kjvdheide
JAL-2847 added database menu items and listeners
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commitdiff
2017-11-21
kjvdheide
Merge remote-tracking branch 'origin/releases/Release_2...
tree
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commitdiff
2017-11-21
kjvdheide
JAL-281 added string label for loading from database
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commitdiff
2017-11-20
kjvdheide
Merge remote-tracking branch 'origin/releases/Release_2...
tree
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commitdiff
2017-11-20
kjvdheide
JAL-2799 JAL-2805 JAL-281 multiple trees can now be...
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commitdiff
2017-11-20
kjvdheide
JAL-281 added history box to tree url input window
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commitdiff
2017-11-20
kjvdheide
JAL-281 option pane with error handling for selecting...
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commitdiff
2017-11-17
kjvdheide
JAL-2805 code refactor (actionPerformed cleaned up...
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commitdiff
2017-11-17
Jim Procter
JAL-2698 source code licencing
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commitdiff
2017-11-17
kjvdheide
JAL-2805 reorganized code, tree building goes through...
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commitdiff
2017-11-17
kjvdheide
JAL-2795 removed unneeded distancematrix length/width...
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commitdiff
2017-11-17
Jim Procter
JAL-2698 Cached PDB Entries -> Cached Structures in...
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commitdiff
2017-11-17
kjvdheide
Merge branch 'kjvdh/features/PhylogenyViewer' of
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2784' into develop
tree
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commitdiff
2017-11-17
kjvdheide
JAL-2805 couple of method name changes
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2821' into develop
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2837' into develop
tree
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commitdiff
2017-11-17
kiramt
Merge branch 'develop' into bug/JAL-2837
bug/JAL-2837
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'doc/JAL-2494_JAL-2828_mergefindAnnotation...
tree
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commitdiff
2017-11-17
kiramt
Merge branch 'develop' into bug/JAL-2837
tree
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commitdiff
2017-11-17
Jim Procter
Merge branch 'bug/JAL-2831' into develop
tree
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commitdiff
2017-11-17
kjvdheide
JAL-281 added menu items and listeners to load from...
tree
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commitdiff
2017-11-17
kjvdheide
JAL-281 changed load associated tree GUI item to menu...
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commitdiff
2017-11-16
Jim Procter
Merge branch 'bug/JAL-2829deleteCharsWithGaps' into...
tree
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commitdiff
2017-11-16
kiramt
JAL-2831 Removed unwanted hidden sequences checks
bug/JAL-2831
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commitdiff
2017-11-16
kjvdheide
JAL-2805 expanded tree and treenode interfaces
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commitdiff
2017-11-16
kjvdheide
JAL-2805 loads of file reorganizing, interfaces expanded
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commitdiff
2017-11-16
kiramt
JAL-2842 remove infinite loop in cursor move
bug/JAL-2842
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commitdiff
2017-11-15
kiramt
JAL-2831 Don't show cursor if position in hidden region
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commitdiff
2017-11-15
kiramt
Merge branch 'bug/JAL-2811' into bug/JAL-2831
tree
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commitdiff
2017-11-15
kiramt
JAL-2811 Updated following review
bug/JAL-2811
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commitdiff
2017-11-15
kiramt
JAL-2840 fix wrapped scrolling when using cursor at...
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commitdiff
2017-11-15
kiramt
JAL-2834 JAL-2836 temporarily disabled wrapped mode...
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commitdiff
2017-11-15
kjvdheide
JAL-2805 functional binding on loading associated trees
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commitdiff
2017-11-15
kiramt
JAL-2831 ported to applet
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commitdiff
2017-11-14
kiramt
JAL-2831 tidies and tests
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commitdiff
2017-11-14
kjvdheide
JAL-2805 viewport is passed along to the tree parser
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commitdiff
2017-11-14
kjvdheide
JAL-2795 added duplication check when calculated nodes...
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commitdiff
2017-11-14
kjvdheide
JAL-2805 added getters for hashmaps filled with associa...
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commitdiff
2017-11-14
kjvdheide
JAL-2805 added static method for logging duplications...
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commitdiff
2017-11-14
kjvdheide
JAL-2805 more sensible interface method params
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commitdiff
2017-11-14
kiramt
JAL-2831 tidy
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commitdiff
2017-11-14
kjvdheide
JAL-2805 finished up interface comments
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commitdiff
2017-11-14
kjvdheide
JAL-2805 re-enabled one2many checks
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commitdiff
2017-11-14
kjvdheide
JAL-2805 interface comments, progress on associating...
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commitdiff
2017-11-14
kiramt
Merge branch 'bug/JAL-2811' into bug/JAL-2831
tree
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commitdiff
2017-11-14
kiramt
JAL-2811 Changed to overlay on via graphics context...
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commitdiff
2017-11-14
kiramt
JAL-2811 Missed commit
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commitdiff
2017-11-14
kiramt
JAL-2811 Made it work for hidden columns/seqs too
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commitdiff
2017-11-14
kiramt
JAL-2831 Attempt at cursor fix for wrapped mode
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commitdiff
2017-11-14
kiramt
Merge branch 'bug/JAL-2811' into bug/JAL-2831
tree
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commitdiff
2017-11-14
kiramt
JAL-2831 deal with hidden cols and seqs in new cursor...
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commitdiff
2017-11-14
kiramt
JAL-2831 Added move viewport event and set up cursor...
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commitdiff
2017-11-14
kiramt
Merge branch 'imp/JAL-2774' into bug/JAL-2831
tree
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commitdiff
2017-11-13
kjvdheide
JAL-2805 interface comments
tree
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commitdiff
2017-11-13
kjvdheide
JAL-2805 some more name changes
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commitdiff
2017-11-13
kjvdheide
JAL-2805 more name changes for clarity
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commitdiff
2017-11-13
kjvdheide
JAL-2805 more interface name changing
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commitdiff
2017-11-13
kjvdheide
JAL-2805 name changed of interfaces for consistency
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commitdiff
2017-11-13
kjvdheide
JAL-2805 Jalview sequence binding interface expanded
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commitdiff
2017-11-13
kjvdheide
JAL-2805 TreeParser now interface based
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commitdiff
2017-11-13
kiramt
JAL-2811 Tidy
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commitdiff
2017-11-13
kjvdheide
JAL-2805 Added tree building interface
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commitdiff
2017-11-13
kjvdheide
JAL-2805 name change
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commitdiff
2017-11-13
kjvdheide
JAL-2805 deleted old Aptx class for loading just Newick...
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commitdiff
2017-11-13
kjvdheide
JAL-2805 more interface work
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commitdiff
2017-11-13
kjvdheide
JAL-2794 removed unused interface
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commitdiff
2017-11-13
kjvdheide
JAL-2805 undid accidental double (buggy) binding, more...
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commitdiff
2017-11-13
Jim Procter
Merge branch 'features/JAL-2758_shorteruniprot' into...
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commitdiff
2017-11-13
Jim Procter
JAL-2758 remove configurable behaviour - Uniprot sequen...
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